RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 RBM12B-AS1Q9P1G2 102 aa2.27□□□□□ -2.05
HMGB3P19-201ENST00000403971 A8MWP4 228 aa2.26□□□□□ -2.05
HMGB3P19-201ENST00000403971 NDUFB1O75438 58 aa2.26□□□□□ -2.05
HMGB3P19-201ENST00000403971 KRTAP25-1Q3LHN0 102 aa2.26□□□□□ -2.05
HMGB3P19-201ENST00000403971 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
HMGB3P19-201ENST00000403971 C8orf87E5RJ46 101 aa2.25□□□□□ -2.05
HMGB3P19-201ENST00000403971 PRR15Q8IV56 129 aa2.25□□□□□ -2.05
HMGB3P19-201ENST00000403971 IGKV3D-7A0A0C4DH55 119 aa2.24□□□□□ -2.05
HMGB3P19-201ENST00000403971 RETNLBQ9BQ08 111 aa2.24□□□□□ -2.05
HMGB3P19-201ENST00000403971 K7EQZ3 153 aa2.23□□□□□ -2.05
HMGB3P19-201ENST00000403971 TPRXLQ17RH7 258 aa2.23□□□□□ -2.05
HMGB3P19-201ENST00000403971 LRP2P98164 4655 aa2.23□□□□□ -2.05
HMGB3P19-201ENST00000403971 HERC1Q15751 4861 aa2.23□□□□□ -2.05
HMGB3P19-201ENST00000403971 MT-ATP8P03928 68 aa2.22□□□□□ -2.05
HMGB3P19-201ENST00000403971 LINC00313P59037 77 aa2.22□□□□□ -2.05
HMGB3P19-201ENST00000403971 HIST1H4AP62805 103 aaKnown RBP2.22□□□□□ -2.05
HMGB3P19-201ENST00000403971 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
HMGB3P19-201ENST00000403971 LPAP08519 4548 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 MMP24-AS1A0A0U1RRL7 71 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 hDV103S1A0JD37 113 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 HCG22E2RYF7 251 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 TMEM254Q8TBM7 123 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 K7ERS5 55 aa2.2□□□□□ -2.06
HMGB3P19-201ENST00000403971 CASC2Q6XLA1 102 aa2.2□□□□□ -2.06
HMGB3P19-201ENST00000403971 C20orf166-AS1Q96NR2 134 aa2.2□□□□□ -2.06
HMGB3P19-201ENST00000403971 MRPL34Q9BQ48 92 aaKnown RBP2.2□□□□□ -2.06
HMGB3P19-201ENST00000403971 ANAPC13Q9BS18 74 aa2.2□□□□□ -2.06
HMGB3P19-201ENST00000403971 A0A087WVE0 104 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 C9orf92A6NGG3 77 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 WFDC13Q8IUB5 93 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 TP53AIP1Q9HCN2 124 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 HMCN2Q8NDA2 5059 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 SCGB1A1P11684 91 aa2.18□□□□□ -2.06
HMGB3P19-201ENST00000403971 SMIM20Q8N5G0 67 aa2.18□□□□□ -2.06
HMGB3P19-201ENST00000403971 ZCCHC13Q8WW36 166 aaKnown RBP2.18□□□□□ -2.06
HMGB3P19-201ENST00000403971 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
HMGB3P19-201ENST00000403971 FAM236AA0A1B0GUQ0 79 aa2.17□□□□□ -2.06
HMGB3P19-201ENST00000403971 FAM236BA0A1B0GV22 79 aa2.17□□□□□ -2.06
HMGB3P19-201ENST00000403971 ATOX1O00244 68 aa2.17□□□□□ -2.06
HMGB3P19-201ENST00000403971 RPL37P61927 97 aaKnown RBP2.17□□□□□ -2.06
HMGB3P19-201ENST00000403971 UQCRQO14949 82 aa2.16□□□□□ -2.06
HMGB3P19-201ENST00000403971 TRAV7A0A075B6U4 112 aa2.15□□□□□ -2.07
HMGB3P19-201ENST00000403971 A6NED7 52 aa2.15□□□□□ -2.07
HMGB3P19-201ENST00000403971 ATP11AUNQ6ZP68 121 aa2.15□□□□□ -2.07
HMGB3P19-201ENST00000403971 TRAV22A0A0B4J277 110 aa2.14□□□□□ -2.07
HMGB3P19-201ENST00000403971 H3BPC8 53 aa2.14□□□□□ -2.07
HMGB3P19-201ENST00000403971 SERP2Q8N6R1 65 aa2.13□□□□□ -2.07
HMGB3P19-201ENST00000403971 LOC101927531A0A1B0GV80 90 aa2.12□□□□□ -2.07
HMGB3P19-201ENST00000403971 H0Y9P7 68 aa2.12□□□□□ -2.07
HMGB3P19-201ENST00000403971 COX7CP15954 63 aa2.12□□□□□ -2.07
HMGB3P19-201ENST00000403971 MP68P56378 58 aa2.12□□□□□ -2.07
HMGB3P19-201ENST00000403971 PCOTHQ58A44 107 aa2.12□□□□□ -2.07
HMGB3P19-201ENST00000403971 A0A1B0GU33 70 aa2.11□□□□□ -2.07
HMGB3P19-201ENST00000403971 C7orf65Q6ZTY9 151 aa2.11□□□□□ -2.07
HMGB3P19-201ENST00000403971 KLKP1Q107X0 134 aa2.1□□□□□ -2.07
HMGB3P19-201ENST00000403971 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
HMGB3P19-201ENST00000403971 LINC00208Q96KT6 92 aa2.1□□□□□ -2.07
HMGB3P19-201ENST00000403971 CYP4F30PQ9H0H9 118 aa2.1□□□□□ -2.07
HMGB3P19-201ENST00000403971 SPINK7P58062 85 aa2.09□□□□□ -2.07
HMGB3P19-201ENST00000403971 NDUFC1O43677 76 aa2.08□□□□□ -2.08
HMGB3P19-201ENST00000403971 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
HMGB3P19-201ENST00000403971 C20orf197Q8N268 126 aa2.08□□□□□ -2.08
HMGB3P19-201ENST00000403971 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
HMGB3P19-201ENST00000403971 SNURFQ9Y675 71 aa2.06□□□□□ -2.08
HMGB3P19-201ENST00000403971 UBR4Q5T4S7 5183 aa2.05□□□□□ -2.08
HMGB3P19-201ENST00000403971 CCDC179H3BU77 68 aa2.05□□□□□ -2.08
HMGB3P19-201ENST00000403971 COX6B2Q6YFQ2 88 aa2.05□□□□□ -2.08
HMGB3P19-201ENST00000403971 A8MUN3 132 aa2.04□□□□□ -2.08
HMGB3P19-201ENST00000403971 H7BZZ5 65 aa2.04□□□□□ -2.08
HMGB3P19-201ENST00000403971 C4orf26Q17RF5 130 aa2.03□□□□□ -2.08
HMGB3P19-201ENST00000403971 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
HMGB3P19-201ENST00000403971 DMAC1Q96GE9 116 aa2.03□□□□□ -2.08
HMGB3P19-201ENST00000403971 MUC2Q02817 5179 aa2.03□□□□□ -2.09
HMGB3P19-201ENST00000403971 FAT4Q6V0I7 4981 aa2.02□□□□□ -2.09
HMGB3P19-201ENST00000403971 ATP5EP56381 51 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P19-201ENST00000403971 TMEM258P61165 79 aa2.02□□□□□ -2.09
HMGB3P19-201ENST00000403971 CYSTM1Q9H1C7 97 aa2.02□□□□□ -2.09
HMGB3P19-201ENST00000403971 FLGP20930 4061 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P19-201ENST00000403971 FAM236DA0A1B0GTK5 79 aa2.01□□□□□ -2.09
HMGB3P19-201ENST00000403971 FAM236CP0DP71 79 aa2.01□□□□□ -2.09
HMGB3P19-201ENST00000403971 ACYP2P14621 99 aa2.01□□□□□ -2.09
HMGB3P19-201ENST00000403971 H1FX-AS1Q4G0G2 97 aa2.01□□□□□ -2.09
HMGB3P19-201ENST00000403971 RNF213Q63HN8 5207 aa2□□□□□ -2.09
HMGB3P19-201ENST00000403971 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
HMGB3P19-201ENST00000403971 S4R3F8 94 aa1.97□□□□□ -2.09
HMGB3P19-201ENST00000403971 MT1HP80294 61 aa1.96□□□□□ -2.1
HMGB3P19-201ENST00000403971 LCA10Q71F78 164 aa1.96□□□□□ -2.1
HMGB3P19-201ENST00000403971 COA5Q86WW8 74 aa1.96□□□□□ -2.1
HMGB3P19-201ENST00000403971 CHKB-CPT1BH3BT56 60 aa1.95□□□□□ -2.1
HMGB3P19-201ENST00000403971 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
HMGB3P19-201ENST00000403971 CSAG1Q6PB30 78 aa1.95□□□□□ -2.1
HMGB3P19-201ENST00000403971 SPTSSBQ8NFR3 76 aa1.95□□□□□ -2.1
HMGB3P19-201ENST00000403971 SERP1Q9Y6X1 66 aa1.95□□□□□ -2.1
HMGB3P19-201ENST00000403971 RPS28P62857 69 aaKnown RBP1.94□□□□□ -2.1
HMGB3P19-201ENST00000403971 H0YAA0 97 aa1.92□□□□□ -2.1
HMGB3P19-201ENST00000403971 M0R2T5 61 aa1.92□□□□□ -2.1
HMGB3P19-201ENST00000403971 LINC01558Q9Y6Z2 57 aa1.88□□□□□ -2.11
HMGB3P19-201ENST00000403971 Q1T7F1 81 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms