RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
CEACAM1-206ENST00000403136 PSPHP1O15172 72 aa6.62□□□□□ -1.35
CEACAM1-206ENST00000403136 LCA10Q71F78 164 aa6.62□□□□□ -1.35
CEACAM1-206ENST00000403136 S4R3F8 94 aa6.62□□□□□ -1.35
CEACAM1-206ENST00000403136 KRTAP3-3Q9BYR6 98 aa6.61□□□□□ -1.35
CEACAM1-206ENST00000403136 PRR15LQ9BU68 103 aa6.6□□□□□ -1.35
CEACAM1-206ENST00000403136 MUC2Q02817 5179 aa6.57□□□□□ -1.36
CEACAM1-206ENST00000403136 KRTAP19-2Q3LHN2 52 aa6.56□□□□□ -1.36
CEACAM1-206ENST00000403136 Q5VV11 94 aa6.56□□□□□ -1.36
CEACAM1-206ENST00000403136 A0A1B0GU69 56 aa6.54□□□□□ -1.36
CEACAM1-206ENST00000403136 SEC61GP60059 68 aa6.51□□□□□ -1.37
CEACAM1-206ENST00000403136 UBR4Q5T4S7 5183 aa6.49□□□□□ -1.37
CEACAM1-206ENST00000403136 CSAG1Q6PB30 78 aa6.49□□□□□ -1.37
CEACAM1-206ENST00000403136 RNF213Q63HN8 5207 aa6.47□□□□□ -1.37
CEACAM1-206ENST00000403136 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.37
CEACAM1-206ENST00000403136 FLGP20930 4061 aaPredicted RBP6.42□□□□□ -1.38
CEACAM1-206ENST00000403136 A6NED7 52 aa6.41□□□□□ -1.38
CEACAM1-206ENST00000403136 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
CEACAM1-206ENST00000403136 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
CEACAM1-206ENST00000403136 KRTAP10-6P60371 365 aaPredicted RBP6.38□□□□□ -1.39
CEACAM1-206ENST00000403136 BRK1Q8WUW1 75 aa6.36□□□□□ -1.39
CEACAM1-206ENST00000403136 A0A1B0GU33 70 aa6.36□□□□□ -1.39
CEACAM1-206ENST00000403136 UQCR11O14957 56 aa6.36□□□□□ -1.39
CEACAM1-206ENST00000403136 ADM2Q7Z4H4 148 aa6.35□□□□□ -1.39
CEACAM1-206ENST00000403136 H0YAA0 97 aa6.34□□□□□ -1.4
CEACAM1-206ENST00000403136 P0C880 135 aa6.31□□□□□ -1.4
CEACAM1-206ENST00000403136 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
CEACAM1-206ENST00000403136 MIR22HGQ0VDD5 57 aa6.29□□□□□ -1.4
CEACAM1-206ENST00000403136 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
CEACAM1-206ENST00000403136 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
CEACAM1-206ENST00000403136 A8MU10 97 aa6.29□□□□□ -1.4
CEACAM1-206ENST00000403136 MT1HP80294 61 aa6.25□□□□□ -1.41
CEACAM1-206ENST00000403136 PRO0628Q9UI54 55 aa6.24□□□□□ -1.41
CEACAM1-206ENST00000403136 M0R2T5 61 aa6.21□□□□□ -1.42
CEACAM1-206ENST00000403136 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
CEACAM1-206ENST00000403136 M0QZ58 72 aa6.16□□□□□ -1.42
CEACAM1-206ENST00000403136 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
CEACAM1-206ENST00000403136 R4GN34 69 aa6.11□□□□□ -1.43
CEACAM1-206ENST00000403136 A0A0D9SG42 100 aa6.09□□□□□ -1.43
CEACAM1-206ENST00000403136 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
CEACAM1-206ENST00000403136 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
CEACAM1-206ENST00000403136 PMAIP1Q13794 54 aa6.03□□□□□ -1.44
CEACAM1-206ENST00000403136 MT2AP02795 61 aa6.01□□□□□ -1.45
CEACAM1-206ENST00000403136 LINC01554Q52M75 96 aa6.01□□□□□ -1.45
CEACAM1-206ENST00000403136 K7ERS5 55 aa5.99□□□□□ -1.45
CEACAM1-206ENST00000403136 A6NN06 94 aa5.98□□□□□ -1.45
CEACAM1-206ENST00000403136 MT1FP04733 61 aa5.98□□□□□ -1.45
CEACAM1-206ENST00000403136 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
CEACAM1-206ENST00000403136 LCE2AQ5TA79 106 aaPredicted RBP5.98□□□□□ -1.45
CEACAM1-206ENST00000403136 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
CEACAM1-206ENST00000403136 KRTAP12-2P59991 146 aa5.95□□□□□ -1.46
CEACAM1-206ENST00000403136 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
CEACAM1-206ENST00000403136 SVIPQ8NHG7 77 aa5.95□□□□□ -1.46
CEACAM1-206ENST00000403136 SPRR2GQ9BYE4 73 aa5.92□□□□□ -1.46
CEACAM1-206ENST00000403136 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.47
CEACAM1-206ENST00000403136 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
CEACAM1-206ENST00000403136 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
CEACAM1-206ENST00000403136 ROMO1P60602 79 aa5.76□□□□□ -1.49
CEACAM1-206ENST00000403136 KRTAP19-8Q3LI54 63 aa5.75□□□□□ -1.49
CEACAM1-206ENST00000403136 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
CEACAM1-206ENST00000403136 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
CEACAM1-206ENST00000403136 MT1BP07438 61 aa5.67□□□□□ -1.5
CEACAM1-206ENST00000403136 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.5
CEACAM1-206ENST00000403136 LCE2BO14633 110 aa5.65□□□□□ -1.51
CEACAM1-206ENST00000403136 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
CEACAM1-206ENST00000403136 USH2AO75445 5202 aa5.51□□□□□ -1.53
CEACAM1-206ENST00000403136 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
CEACAM1-206ENST00000403136 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
CEACAM1-206ENST00000403136 MT1XP80297 61 aa5.5□□□□□ -1.53
CEACAM1-206ENST00000403136 TNP1P09430 55 aa5.47□□□□□ -1.53
CEACAM1-206ENST00000403136 PRO2289Q9P1D8 64 aa5.43□□□□□ -1.54
CEACAM1-206ENST00000403136 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
CEACAM1-206ENST00000403136 PP632Q6XCG6 107 aa5.32□□□□□ -1.56
CEACAM1-206ENST00000403136 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
CEACAM1-206ENST00000403136 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
CEACAM1-206ENST00000403136 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
CEACAM1-206ENST00000403136 FSIP2Q5CZC0 6907 aa5.23□□□□□ -1.57
CEACAM1-206ENST00000403136 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
CEACAM1-206ENST00000403136 KRTAP10-12P60413 245 aa5.21□□□□□ -1.57
CEACAM1-206ENST00000403136 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
CEACAM1-206ENST00000403136 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
CEACAM1-206ENST00000403136 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.59
CEACAM1-206ENST00000403136 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
CEACAM1-206ENST00000403136 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
CEACAM1-206ENST00000403136 KMT2DO14686 5537 aa5.07□□□□□ -1.6
CEACAM1-206ENST00000403136 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
CEACAM1-206ENST00000403136 CRCT1Q9UGL9 99 aa5.01□□□□□ -1.61
CEACAM1-206ENST00000403136 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
CEACAM1-206ENST00000403136 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
CEACAM1-206ENST00000403136 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
CEACAM1-206ENST00000403136 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
CEACAM1-206ENST00000403136 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
CEACAM1-206ENST00000403136 MT1EP04732 61 aa4.81□□□□□ -1.64
CEACAM1-206ENST00000403136 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
CEACAM1-206ENST00000403136 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
CEACAM1-206ENST00000403136 SPRR5A0A1B0GTR4 108 aa4.73□□□□□ -1.65
CEACAM1-206ENST00000403136 MT1LQ93083 61 aa4.73□□□□□ -1.65
CEACAM1-206ENST00000403136 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
CEACAM1-206ENST00000403136 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
CEACAM1-206ENST00000403136 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms