RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 H1FX-AS1Q4G0G2 97 aa4.33□□□□□ -1.72
LINC02449-202ENST00000399866 S4R3F8 94 aa4.33□□□□□ -1.72
LINC02449-202ENST00000399866 A0A1B0GU69 56 aa4.31□□□□□ -1.72
LINC02449-202ENST00000399866 LCA10Q71F78 164 aa4.31□□□□□ -1.72
LINC02449-202ENST00000399866 KRTAP3-3Q9BYR6 98 aa4.3□□□□□ -1.72
LINC02449-202ENST00000399866 HMCN2Q8NDA2 5059 aa4.28□□□□□ -1.72
LINC02449-202ENST00000399866 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
LINC02449-202ENST00000399866 SEC61GP60059 68 aa4.26□□□□□ -1.73
LINC02449-202ENST00000399866 BRK1Q8WUW1 75 aa4.26□□□□□ -1.73
LINC02449-202ENST00000399866 HERC1Q15751 4861 aa4.25□□□□□ -1.73
LINC02449-202ENST00000399866 A6NED7 52 aa4.25□□□□□ -1.73
LINC02449-202ENST00000399866 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
LINC02449-202ENST00000399866 CSAG1Q6PB30 78 aa4.19□□□□□ -1.74
LINC02449-202ENST00000399866 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
LINC02449-202ENST00000399866 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
LINC02449-202ENST00000399866 A8MU10 97 aa4.18□□□□□ -1.74
LINC02449-202ENST00000399866 UQCR11O14957 56 aa4.18□□□□□ -1.74
LINC02449-202ENST00000399866 UBR4Q5T4S7 5183 aa4.18□□□□□ -1.74
LINC02449-202ENST00000399866 KRTAP3-2Q9BYR7 98 aa4.17□□□□□ -1.74
LINC02449-202ENST00000399866 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
LINC02449-202ENST00000399866 A0A1B0GU33 70 aa4.15□□□□□ -1.75
LINC02449-202ENST00000399866 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
LINC02449-202ENST00000399866 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
LINC02449-202ENST00000399866 H0YAA0 97 aa4.13□□□□□ -1.75
LINC02449-202ENST00000399866 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
LINC02449-202ENST00000399866 P0C880 135 aa4.12□□□□□ -1.75
LINC02449-202ENST00000399866 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
LINC02449-202ENST00000399866 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
LINC02449-202ENST00000399866 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
LINC02449-202ENST00000399866 MT1HP80294 61 aa4.02□□□□□ -1.77
LINC02449-202ENST00000399866 A6NN06 94 aa4.01□□□□□ -1.77
LINC02449-202ENST00000399866 M0QZ58 72 aa4.01□□□□□ -1.77
LINC02449-202ENST00000399866 MUC2Q02817 5179 aa4.01□□□□□ -1.77
LINC02449-202ENST00000399866 PMAIP1Q13794 54 aa4□□□□□ -1.77
LINC02449-202ENST00000399866 A0A0D9SG42 100 aa3.99□□□□□ -1.77
LINC02449-202ENST00000399866 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
LINC02449-202ENST00000399866 LORP23490 312 aaPredicted RBP3.98□□□□□ -1.77
LINC02449-202ENST00000399866 M0R2T5 61 aa3.97□□□□□ -1.77
LINC02449-202ENST00000399866 R4GN34 69 aa3.97□□□□□ -1.77
LINC02449-202ENST00000399866 K7ERS5 55 aa3.94□□□□□ -1.78
LINC02449-202ENST00000399866 CRIPTQ9P021 101 aa3.92□□□□□ -1.78
LINC02449-202ENST00000399866 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
LINC02449-202ENST00000399866 KRTAP12-2P59991 146 aa3.9□□□□□ -1.79
LINC02449-202ENST00000399866 LINC01554Q52M75 96 aa3.9□□□□□ -1.79
LINC02449-202ENST00000399866 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
LINC02449-202ENST00000399866 MT2AP02795 61 aa3.89□□□□□ -1.79
LINC02449-202ENST00000399866 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
LINC02449-202ENST00000399866 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
LINC02449-202ENST00000399866 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
LINC02449-202ENST00000399866 MT1FP04733 61 aa3.86□□□□□ -1.79
LINC02449-202ENST00000399866 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
LINC02449-202ENST00000399866 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
LINC02449-202ENST00000399866 KRTAP19-1Q8IUB9 90 aa3.81□□□□□ -1.8
LINC02449-202ENST00000399866 ROMO1P60602 79 aa3.8□□□□□ -1.8
LINC02449-202ENST00000399866 LCE2AQ5TA79 106 aaPredicted RBP3.8□□□□□ -1.8
LINC02449-202ENST00000399866 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
LINC02449-202ENST00000399866 KRTAP9-3Q9BYQ3 159 aa3.74□□□□□ -1.81
LINC02449-202ENST00000399866 KRTAP19-8Q3LI54 63 aa3.73□□□□□ -1.81
LINC02449-202ENST00000399866 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
LINC02449-202ENST00000399866 PLAC4Q8WY50 150 aa3.71□□□□□ -1.82
LINC02449-202ENST00000399866 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
LINC02449-202ENST00000399866 KRTAP9-2Q9BYQ4 174 aa3.68□□□□□ -1.82
LINC02449-202ENST00000399866 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
LINC02449-202ENST00000399866 MT1BP07438 61 aa3.67□□□□□ -1.82
LINC02449-202ENST00000399866 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
LINC02449-202ENST00000399866 LCE2BO14633 110 aa3.62□□□□□ -1.83
LINC02449-202ENST00000399866 MT1XP80297 61 aa3.57□□□□□ -1.84
LINC02449-202ENST00000399866 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
LINC02449-202ENST00000399866 FSIP2Q5CZC0 6907 aa3.55□□□□□ -1.84
LINC02449-202ENST00000399866 TNP1P09430 55 aa3.55□□□□□ -1.84
LINC02449-202ENST00000399866 PRO2289Q9P1D8 64 aa3.5□□□□□ -1.85
LINC02449-202ENST00000399866 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
LINC02449-202ENST00000399866 LCE2DQ5TA82 110 aaPredicted RBP3.48□□□□□ -1.85
LINC02449-202ENST00000399866 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
LINC02449-202ENST00000399866 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
LINC02449-202ENST00000399866 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
LINC02449-202ENST00000399866 USH2AO75445 5202 aa3.43□□□□□ -1.86
LINC02449-202ENST00000399866 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
LINC02449-202ENST00000399866 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
LINC02449-202ENST00000399866 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
LINC02449-202ENST00000399866 H3BS24 57 aa3.36□□□□□ -1.87
LINC02449-202ENST00000399866 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
LINC02449-202ENST00000399866 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
LINC02449-202ENST00000399866 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
LINC02449-202ENST00000399866 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
LINC02449-202ENST00000399866 KRTAP4-8A0A0G2JLE6 195 aa3.25□□□□□ -1.89
LINC02449-202ENST00000399866 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
LINC02449-202ENST00000399866 KRTAP4-8Q9BYQ9 185 aa3.25□□□□□ -1.89
LINC02449-202ENST00000399866 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
LINC02449-202ENST00000399866 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.9
LINC02449-202ENST00000399866 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
LINC02449-202ENST00000399866 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
LINC02449-202ENST00000399866 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
LINC02449-202ENST00000399866 FCGBPQ9Y6R7 5405 aaPredicted RBP3.14□□□□□ -1.91
LINC02449-202ENST00000399866 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
LINC02449-202ENST00000399866 MT1EP04732 61 aa3.12□□□□□ -1.91
LINC02449-202ENST00000399866 MT1LQ93083 61 aa3.07□□□□□ -1.92
LINC02449-202ENST00000399866 KMT2DO14686 5537 aa3.07□□□□□ -1.92
LINC02449-202ENST00000399866 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
LINC02449-202ENST00000399866 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms