RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 SPANXA2-OT1Q8N9U9 137 aa8.93□□□□□ -0.98
SMIM11A-202ENST00000399295 ATP5EP56381 51 aaPredicted RBP8.9□□□□□ -0.98
SMIM11A-202ENST00000399295 M0R2T5 61 aa8.89□□□□□ -0.99
SMIM11A-202ENST00000399295 FLGP20930 4061 aaPredicted RBP8.88□□□□□ -0.99
SMIM11A-202ENST00000399295 FAM236DA0A1B0GTK5 79 aa8.86□□□□□ -0.99
SMIM11A-202ENST00000399295 FAM236CP0DP71 79 aa8.86□□□□□ -0.99
SMIM11A-202ENST00000399295 HRES1P13985 223 aa8.86□□□□□ -0.99
SMIM11A-202ENST00000399295 CRCT1Q9UGL9 99 aa8.86□□□□□ -0.99
SMIM11A-202ENST00000399295 FSIP2Q5CZC0 6907 aa8.85□□□□□ -0.99
SMIM11A-202ENST00000399295 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
SMIM11A-202ENST00000399295 MPLKIPQ8TAP9 179 aa8.82□□□□□ -1
SMIM11A-202ENST00000399295 KRTAP10-6P60371 365 aaPredicted RBP8.79□□□□□ -1
SMIM11A-202ENST00000399295 LORP23490 312 aaPredicted RBP8.78□□□□□ -1
SMIM11A-202ENST00000399295 A8MUN3 132 aa8.74□□□□□ -1.01
SMIM11A-202ENST00000399295 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
SMIM11A-202ENST00000399295 DMAC1Q96GE9 116 aa8.74□□□□□ -1.01
SMIM11A-202ENST00000399295 KRTAP4-12Q9BQ66 201 aa8.74□□□□□ -1.01
SMIM11A-202ENST00000399295 KRTAP4-7Q9BYR0 210 aa8.72□□□□□ -1.01
SMIM11A-202ENST00000399295 ACYP2P14621 99 aa8.71□□□□□ -1.02
SMIM11A-202ENST00000399295 SERP1Q9Y6X1 66 aa8.67□□□□□ -1.02
SMIM11A-202ENST00000399295 RPS28P62857 69 aaKnown RBP8.63□□□□□ -1.03
SMIM11A-202ENST00000399295 KRTAP3-1Q9BYR8 98 aa8.61□□□□□ -1.03
SMIM11A-202ENST00000399295 COA5Q86WW8 74 aa8.59□□□□□ -1.03
SMIM11A-202ENST00000399295 CHKB-CPT1BH3BT56 60 aa8.55□□□□□ -1.04
SMIM11A-202ENST00000399295 KRTAP9-8Q9BYQ0 159 aa8.55□□□□□ -1.04
SMIM11A-202ENST00000399295 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
SMIM11A-202ENST00000399295 SPTSSBQ8NFR3 76 aa8.47□□□□□ -1.05
SMIM11A-202ENST00000399295 MT2AP02795 61 aa8.45□□□□□ -1.06
SMIM11A-202ENST00000399295 SMIM26A0A096LP01 95 aa8.44□□□□□ -1.06
SMIM11A-202ENST00000399295 S4R3F8 94 aa8.44□□□□□ -1.06
SMIM11A-202ENST00000399295 KRTAP4-2Q9BYR5 136 aa8.42□□□□□ -1.06
SMIM11A-202ENST00000399295 MT1FP04733 61 aa8.38□□□□□ -1.07
SMIM11A-202ENST00000399295 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
SMIM11A-202ENST00000399295 LCE1DQ5T752 114 aa8.38□□□□□ -1.07
SMIM11A-202ENST00000399295 LCA10Q71F78 164 aa8.38□□□□□ -1.07
SMIM11A-202ENST00000399295 KRTAP9-7A8MTY7 169 aa8.37□□□□□ -1.07
SMIM11A-202ENST00000399295 V9GYY9 64 aa8.34□□□□□ -1.07
SMIM11A-202ENST00000399295 KRTAP19-1Q8IUB9 90 aa8.3□□□□□ -1.08
SMIM11A-202ENST00000399295 KRTAP4-9Q9BYQ8 210 aa8.3□□□□□ -1.08
SMIM11A-202ENST00000399295 Q1T7F1 81 aa8.29□□□□□ -1.08
SMIM11A-202ENST00000399295 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
SMIM11A-202ENST00000399295 KRTAP9-3Q9BYQ3 159 aa8.28□□□□□ -1.08
SMIM11A-202ENST00000399295 LINC01558Q9Y6Z2 57 aa8.25□□□□□ -1.09
SMIM11A-202ENST00000399295 KRTAP5-3Q6L8H2 238 aa8.23□□□□□ -1.09
SMIM11A-202ENST00000399295 USH2AO75445 5202 aa8.23□□□□□ -1.09
SMIM11A-202ENST00000399295 SEC61GP60059 68 aa8.2□□□□□ -1.1
SMIM11A-202ENST00000399295 PRR15LQ9BU68 103 aa8.19□□□□□ -1.1
SMIM11A-202ENST00000399295 A0A1B0GU69 56 aa8.17□□□□□ -1.1
SMIM11A-202ENST00000399295 H0YAA0 97 aa8.12□□□□□ -1.11
SMIM11A-202ENST00000399295 SSPOA2VEC9 5147 aa8.1□□□□□ -1.11
SMIM11A-202ENST00000399295 PSPHP1O15172 72 aa8.08□□□□□ -1.12
SMIM11A-202ENST00000399295 Q5VV11 94 aa8.02□□□□□ -1.13
SMIM11A-202ENST00000399295 ADM2Q7Z4H4 148 aa8.02□□□□□ -1.13
SMIM11A-202ENST00000399295 A0A1B0GU33 70 aa7.94□□□□□ -1.14
SMIM11A-202ENST00000399295 P0C880 135 aa7.93□□□□□ -1.14
SMIM11A-202ENST00000399295 UQCR11O14957 56 aa7.92□□□□□ -1.14
SMIM11A-202ENST00000399295 KRTAP19-6Q3LI70 58 aa7.92□□□□□ -1.14
SMIM11A-202ENST00000399295 FCGBPQ9Y6R7 5405 aaPredicted RBP7.91□□□□□ -1.14
SMIM11A-202ENST00000399295 A6NED7 52 aa7.88□□□□□ -1.15
SMIM11A-202ENST00000399295 SPRR2GQ9BYE4 73 aa7.86□□□□□ -1.15
SMIM11A-202ENST00000399295 KRTAP4-11Q9BYQ6 195 aa7.85□□□□□ -1.15
SMIM11A-202ENST00000399295 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
SMIM11A-202ENST00000399295 M0QZ58 72 aa7.84□□□□□ -1.15
SMIM11A-202ENST00000399295 MIR22HGQ0VDD5 57 aa7.79□□□□□ -1.16
SMIM11A-202ENST00000399295 SYNE2Q8WXH0 6885 aaKnown RBP7.79□□□□□ -1.16
SMIM11A-202ENST00000399295 R4GN34 69 aa7.78□□□□□ -1.16
SMIM11A-202ENST00000399295 KRTAP19-8Q3LI54 63 aa7.77□□□□□ -1.17
SMIM11A-202ENST00000399295 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
SMIM11A-202ENST00000399295 CDC42SE1Q9NRR8 79 aa7.75□□□□□ -1.17
SMIM11A-202ENST00000399295 MACF1Q9UPN3 7388 aaKnown RBP7.74□□□□□ -1.17
SMIM11A-202ENST00000399295 MT1BP07438 61 aa7.74□□□□□ -1.17
SMIM11A-202ENST00000399295 KRTAP13-4Q3LI77 160 aa7.71□□□□□ -1.18
SMIM11A-202ENST00000399295 BRK1Q8WUW1 75 aa7.7□□□□□ -1.18
SMIM11A-202ENST00000399295 A6NN06 94 aa7.6□□□□□ -1.19
SMIM11A-202ENST00000399295 A8MU10 97 aa7.6□□□□□ -1.19
SMIM11A-202ENST00000399295 A0A0D9SG42 100 aa7.59□□□□□ -1.19
SMIM11A-202ENST00000399295 LINC01554Q52M75 96 aa7.57□□□□□ -1.2
SMIM11A-202ENST00000399295 K7ERS5 55 aa7.54□□□□□ -1.2
SMIM11A-202ENST00000399295 KRTAP10-5P60370 271 aa7.53□□□□□ -1.2
SMIM11A-202ENST00000399295 PRO0628Q9UI54 55 aa7.52□□□□□ -1.21
SMIM11A-202ENST00000399295 KRTAP6-3Q3LI67 103 aa7.5□□□□□ -1.21
SMIM11A-202ENST00000399295 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
SMIM11A-202ENST00000399295 SPINT4Q6UDR6 99 aa7.45□□□□□ -1.22
SMIM11A-202ENST00000399295 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
SMIM11A-202ENST00000399295 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
SMIM11A-202ENST00000399295 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
SMIM11A-202ENST00000399295 NEBP20929 6669 aa7.36□□□□□ -1.23
SMIM11A-202ENST00000399295 MT1XP80297 61 aa7.32□□□□□ -1.24
SMIM11A-202ENST00000399295 PMAIP1Q13794 54 aa7.3□□□□□ -1.24
SMIM11A-202ENST00000399295 KRTAP20-1Q3LI63 56 aa7.3□□□□□ -1.24
SMIM11A-202ENST00000399295 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
SMIM11A-202ENST00000399295 MUC12Q9UKN1 5478 aa7.21□□□□□ -1.26
SMIM11A-202ENST00000399295 KRTAP5-9P26371 169 aa7.17□□□□□ -1.26
SMIM11A-202ENST00000399295 ROMO1P60602 79 aa7.15□□□□□ -1.26
SMIM11A-202ENST00000399295 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
SMIM11A-202ENST00000399295 KMT2DO14686 5537 aa7.1□□□□□ -1.27
SMIM11A-202ENST00000399295 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
SMIM11A-202ENST00000399295 LCE5AQ5TCM9 118 aa7□□□□□ -1.29
SMIM11A-202ENST00000399295 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
SMIM11A-202ENST00000399295 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms