RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 PRR15LQ9BU68 103 aa3.63□□□□□ -1.83
CX3CR1-202ENST00000399220 C9orf92A6NGG3 77 aa3.63□□□□□ -1.83
CX3CR1-202ENST00000399220 IGKV2D-30A0A075B6S6 120 aa3.62□□□□□ -1.83
CX3CR1-202ENST00000399220 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
CX3CR1-202ENST00000399220 A8MU10 97 aa3.61□□□□□ -1.83
CX3CR1-202ENST00000399220 ACYP2P14621 99 aa3.61□□□□□ -1.83
CX3CR1-202ENST00000399220 PCOTHQ58A44 107 aa3.6□□□□□ -1.83
CX3CR1-202ENST00000399220 SPATA8Q6RVD6 105 aa3.58□□□□□ -1.84
CX3CR1-202ENST00000399220 SPINK7P58062 85 aa3.57□□□□□ -1.84
CX3CR1-202ENST00000399220 PRAC1Q96KF2 57 aa3.56□□□□□ -1.84
CX3CR1-202ENST00000399220 A6NED7 52 aa3.55□□□□□ -1.84
CX3CR1-202ENST00000399220 KRTAP3-1Q9BYR8 98 aa3.55□□□□□ -1.84
CX3CR1-202ENST00000399220 COX6B2Q6YFQ2 88 aa3.54□□□□□ -1.84
CX3CR1-202ENST00000399220 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
CX3CR1-202ENST00000399220 RBM12B-AS1Q9P1G2 102 aa3.53□□□□□ -1.84
CX3CR1-202ENST00000399220 SEC61BP60468 96 aaKnown RBP3.51□□□□□ -1.85
CX3CR1-202ENST00000399220 LPAP08519 4548 aa3.5□□□□□ -1.85
CX3CR1-202ENST00000399220 HMCN2Q8NDA2 5059 aa3.49□□□□□ -1.85
CX3CR1-202ENST00000399220 LRP2P98164 4655 aa3.49□□□□□ -1.85
CX3CR1-202ENST00000399220 LORP23490 312 aaPredicted RBP3.48□□□□□ -1.85
CX3CR1-202ENST00000399220 HERC1Q15751 4861 aa3.47□□□□□ -1.85
CX3CR1-202ENST00000399220 SPTSSBQ8NFR3 76 aa3.47□□□□□ -1.85
CX3CR1-202ENST00000399220 A0A1B0GU69 56 aa3.46□□□□□ -1.86
CX3CR1-202ENST00000399220 UQCR11O14957 56 aa3.45□□□□□ -1.86
CX3CR1-202ENST00000399220 DMBT1Q9UGM3 2413 aaPredicted RBP3.45□□□□□ -1.86
CX3CR1-202ENST00000399220 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
CX3CR1-202ENST00000399220 H1FX-AS1Q4G0G2 97 aa3.44□□□□□ -1.86
CX3CR1-202ENST00000399220 MIR22HGQ0VDD5 57 aa3.42□□□□□ -1.86
CX3CR1-202ENST00000399220 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
CX3CR1-202ENST00000399220 S4R3F8 94 aa3.39□□□□□ -1.87
CX3CR1-202ENST00000399220 H0YAA0 97 aa3.38□□□□□ -1.87
CX3CR1-202ENST00000399220 FLGP20930 4061 aaPredicted RBP3.33□□□□□ -1.88
CX3CR1-202ENST00000399220 ADM2Q7Z4H4 148 aa3.33□□□□□ -1.88
CX3CR1-202ENST00000399220 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
CX3CR1-202ENST00000399220 LINC01554Q52M75 96 aa3.32□□□□□ -1.88
CX3CR1-202ENST00000399220 CSAG1Q6PB30 78 aa3.3□□□□□ -1.88
CX3CR1-202ENST00000399220 A0A1B0GU33 70 aa3.28□□□□□ -1.88
CX3CR1-202ENST00000399220 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
CX3CR1-202ENST00000399220 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
CX3CR1-202ENST00000399220 KRTAP23-1A1A580 65 aa3.23□□□□□ -1.89
CX3CR1-202ENST00000399220 M0QZ58 72 aa3.22□□□□□ -1.89
CX3CR1-202ENST00000399220 P0C880 135 aa3.21□□□□□ -1.9
CX3CR1-202ENST00000399220 CRIPTQ9P021 101 aa3.2□□□□□ -1.9
CX3CR1-202ENST00000399220 MT1HP80294 61 aa3.19□□□□□ -1.9
CX3CR1-202ENST00000399220 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
CX3CR1-202ENST00000399220 UBR4Q5T4S7 5183 aa3.17□□□□□ -1.9
CX3CR1-202ENST00000399220 ROMO1P60602 79 aa3.17□□□□□ -1.9
CX3CR1-202ENST00000399220 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
CX3CR1-202ENST00000399220 MUC2Q02817 5179 aa3.17□□□□□ -1.9
CX3CR1-202ENST00000399220 FAT4Q6V0I7 4981 aa3.15□□□□□ -1.91
CX3CR1-202ENST00000399220 K7ERS5 55 aa3.14□□□□□ -1.91
CX3CR1-202ENST00000399220 KRTAP9-8Q9BYQ0 159 aa3.1□□□□□ -1.91
CX3CR1-202ENST00000399220 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
CX3CR1-202ENST00000399220 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
CX3CR1-202ENST00000399220 R4GN34 69 aa3.08□□□□□ -1.92
CX3CR1-202ENST00000399220 MT2AP02795 61 aa3.07□□□□□ -1.92
CX3CR1-202ENST00000399220 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
CX3CR1-202ENST00000399220 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
CX3CR1-202ENST00000399220 KRTAP19-1Q8IUB9 90 aa3.04□□□□□ -1.92
CX3CR1-202ENST00000399220 MT1FP04733 61 aa3.04□□□□□ -1.92
CX3CR1-202ENST00000399220 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
CX3CR1-202ENST00000399220 A0A0D9SG42 100 aa3□□□□□ -1.93
CX3CR1-202ENST00000399220 M0R2T5 61 aa3□□□□□ -1.93
CX3CR1-202ENST00000399220 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
CX3CR1-202ENST00000399220 KRTAP10-10P60014 251 aa2.95□□□□□ -1.94
CX3CR1-202ENST00000399220 SPINT4Q6UDR6 99 aa2.95□□□□□ -1.94
CX3CR1-202ENST00000399220 MT1BP07438 61 aa2.93□□□□□ -1.94
CX3CR1-202ENST00000399220 C10orf95Q9H7T3 257 aa2.92□□□□□ -1.94
CX3CR1-202ENST00000399220 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
CX3CR1-202ENST00000399220 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
CX3CR1-202ENST00000399220 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
CX3CR1-202ENST00000399220 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
CX3CR1-202ENST00000399220 KRTAP10-5P60370 271 aa2.84□□□□□ -1.95
CX3CR1-202ENST00000399220 MT1XP80297 61 aa2.84□□□□□ -1.95
CX3CR1-202ENST00000399220 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
CX3CR1-202ENST00000399220 TNP1P09430 55 aa2.8□□□□□ -1.96
CX3CR1-202ENST00000399220 PRO2289Q9P1D8 64 aa2.78□□□□□ -1.96
CX3CR1-202ENST00000399220 USH2AO75445 5202 aa2.75□□□□□ -1.97
CX3CR1-202ENST00000399220 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
CX3CR1-202ENST00000399220 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
CX3CR1-202ENST00000399220 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
CX3CR1-202ENST00000399220 KRTAP8-1Q8IUC2 63 aa2.71□□□□□ -1.98
CX3CR1-202ENST00000399220 KRTAP10-7P60409 375 aaPredicted RBP2.68□□□□□ -1.98
CX3CR1-202ENST00000399220 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
CX3CR1-202ENST00000399220 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
CX3CR1-202ENST00000399220 KRTAP19-4Q3LI73 84 aa2.61□□□□□ -1.99
CX3CR1-202ENST00000399220 LOC100996750A0A140TA64 210 aa2.59□□□□□ -2
CX3CR1-202ENST00000399220 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -2
CX3CR1-202ENST00000399220 KRTAP9-6A0A140TA67 174 aa2.58□□□□□ -2
CX3CR1-202ENST00000399220 KRTAP9-7A8MTY7 169 aa2.58□□□□□ -2
CX3CR1-202ENST00000399220 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
CX3CR1-202ENST00000399220 KRTAP12-3P60328 96 aa2.57□□□□□ -2
CX3CR1-202ENST00000399220 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
CX3CR1-202ENST00000399220 KRTAP9-2Q9BYQ4 174 aa2.55□□□□□ -2
CX3CR1-202ENST00000399220 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
CX3CR1-202ENST00000399220 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2.01
CX3CR1-202ENST00000399220 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
CX3CR1-202ENST00000399220 KRTAP9-9Q9BYP9 154 aa2.51□□□□□ -2.01
CX3CR1-202ENST00000399220 KRTAP4-8Q9BYQ9 185 aa2.51□□□□□ -2.01
CX3CR1-202ENST00000399220 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 390 ms