RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 C4orf26Q17RF5 130 aa6.12□□□□□ -1.43
HLA-DQB1-203ENST00000399082 LOC101927531A0A1B0GV80 90 aa6.11□□□□□ -1.43
HLA-DQB1-203ENST00000399082 KRTAP10-6P60371 365 aaPredicted RBP6.1□□□□□ -1.43
HLA-DQB1-203ENST00000399082 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
HLA-DQB1-203ENST00000399082 ATOX1O00244 68 aa6.09□□□□□ -1.43
HLA-DQB1-203ENST00000399082 M0R2T5 61 aa6.08□□□□□ -1.44
HLA-DQB1-203ENST00000399082 SCGB1A1P11684 91 aa6.08□□□□□ -1.44
HLA-DQB1-203ENST00000399082 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
HLA-DQB1-203ENST00000399082 LINC00208Q96KT6 92 aa6.07□□□□□ -1.44
HLA-DQB1-203ENST00000399082 H1FX-AS1Q4G0G2 97 aa6.06□□□□□ -1.44
HLA-DQB1-203ENST00000399082 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
HLA-DQB1-203ENST00000399082 MP68P56378 58 aa6.04□□□□□ -1.44
HLA-DQB1-203ENST00000399082 KLKP1Q107X0 134 aa6.04□□□□□ -1.44
HLA-DQB1-203ENST00000399082 TRAV7A0A075B6U4 112 aa6.02□□□□□ -1.45
HLA-DQB1-203ENST00000399082 H3BPC8 53 aa6.01□□□□□ -1.45
HLA-DQB1-203ENST00000399082 SMIM20Q8N5G0 67 aa6□□□□□ -1.45
HLA-DQB1-203ENST00000399082 MT2AP02795 61 aa5.95□□□□□ -1.46
HLA-DQB1-203ENST00000399082 SERP2Q8N6R1 65 aa5.93□□□□□ -1.46
HLA-DQB1-203ENST00000399082 S4R3F8 94 aa5.92□□□□□ -1.46
HLA-DQB1-203ENST00000399082 MT1FP04733 61 aa5.91□□□□□ -1.46
HLA-DQB1-203ENST00000399082 LCA10Q71F78 164 aa5.91□□□□□ -1.46
HLA-DQB1-203ENST00000399082 SNURFQ9Y675 71 aa5.89□□□□□ -1.47
HLA-DQB1-203ENST00000399082 A8MUN3 132 aa5.87□□□□□ -1.47
HLA-DQB1-203ENST00000399082 C20orf197Q8N268 126 aa5.87□□□□□ -1.47
HLA-DQB1-203ENST00000399082 DMAC1Q96GE9 116 aa5.85□□□□□ -1.47
HLA-DQB1-203ENST00000399082 COX7CP15954 63 aa5.83□□□□□ -1.48
HLA-DQB1-203ENST00000399082 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
HLA-DQB1-203ENST00000399082 CSAG1Q6PB30 78 aa5.81□□□□□ -1.48
HLA-DQB1-203ENST00000399082 CYSTM1Q9H1C7 97 aa5.79□□□□□ -1.48
HLA-DQB1-203ENST00000399082 USH2AO75445 5202 aa5.76□□□□□ -1.49
HLA-DQB1-203ENST00000399082 ANAPC13Q9BS18 74 aa5.76□□□□□ -1.49
HLA-DQB1-203ENST00000399082 NDUFC1O43677 76 aa5.75□□□□□ -1.49
HLA-DQB1-203ENST00000399082 SPANXA2-OT1Q8N9U9 137 aa5.75□□□□□ -1.49
HLA-DQB1-203ENST00000399082 FSIP2Q5CZC0 6907 aa5.71□□□□□ -1.5
HLA-DQB1-203ENST00000399082 H7BZZ5 65 aa5.71□□□□□ -1.5
HLA-DQB1-203ENST00000399082 ACYP2P14621 99 aa5.7□□□□□ -1.5
HLA-DQB1-203ENST00000399082 CCDC179H3BU77 68 aa5.69□□□□□ -1.5
HLA-DQB1-203ENST00000399082 H0YAA0 97 aa5.67□□□□□ -1.5
HLA-DQB1-203ENST00000399082 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
HLA-DQB1-203ENST00000399082 ADM2Q7Z4H4 148 aa5.61□□□□□ -1.51
HLA-DQB1-203ENST00000399082 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
HLA-DQB1-203ENST00000399082 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
HLA-DQB1-203ENST00000399082 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
HLA-DQB1-203ENST00000399082 COA5Q86WW8 74 aa5.58□□□□□ -1.52
HLA-DQB1-203ENST00000399082 P0C880 135 aa5.57□□□□□ -1.52
HLA-DQB1-203ENST00000399082 SPTSSBQ8NFR3 76 aa5.54□□□□□ -1.52
HLA-DQB1-203ENST00000399082 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
HLA-DQB1-203ENST00000399082 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
HLA-DQB1-203ENST00000399082 MT1BP07438 61 aa5.51□□□□□ -1.53
HLA-DQB1-203ENST00000399082 FCGBPQ9Y6R7 5405 aaPredicted RBP5.46□□□□□ -1.54
HLA-DQB1-203ENST00000399082 ATP5EP56381 51 aaPredicted RBP5.45□□□□□ -1.54
HLA-DQB1-203ENST00000399082 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
HLA-DQB1-203ENST00000399082 TMEM258P61165 79 aa5.44□□□□□ -1.54
HLA-DQB1-203ENST00000399082 Q5VV11 94 aa5.44□□□□□ -1.54
HLA-DQB1-203ENST00000399082 R4GN34 69 aa5.41□□□□□ -1.54
HLA-DQB1-203ENST00000399082 M0QZ58 72 aa5.4□□□□□ -1.54
HLA-DQB1-203ENST00000399082 KRTAP13-4Q3LI77 160 aa5.35□□□□□ -1.55
HLA-DQB1-203ENST00000399082 PCP4P48539 62 aa5.32□□□□□ -1.56
HLA-DQB1-203ENST00000399082 LINC01554Q52M75 96 aa5.3□□□□□ -1.56
HLA-DQB1-203ENST00000399082 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
HLA-DQB1-203ENST00000399082 SERP1Q9Y6X1 66 aa5.28□□□□□ -1.56
HLA-DQB1-203ENST00000399082 SEC61GP60059 68 aa5.27□□□□□ -1.57
HLA-DQB1-203ENST00000399082 A0A1B0GU69 56 aa5.25□□□□□ -1.57
HLA-DQB1-203ENST00000399082 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
HLA-DQB1-203ENST00000399082 A6NN06 94 aa5.25□□□□□ -1.57
HLA-DQB1-203ENST00000399082 LINC01558Q9Y6Z2 57 aa5.24□□□□□ -1.57
HLA-DQB1-203ENST00000399082 A0A1B0GU33 70 aa5.23□□□□□ -1.57
HLA-DQB1-203ENST00000399082 MT1XP80297 61 aa5.23□□□□□ -1.57
HLA-DQB1-203ENST00000399082 PLAC4Q8WY50 150 aa5.22□□□□□ -1.57
HLA-DQB1-203ENST00000399082 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
HLA-DQB1-203ENST00000399082 SPATA8Q6RVD6 105 aa5.21□□□□□ -1.58
HLA-DQB1-203ENST00000399082 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
HLA-DQB1-203ENST00000399082 A0A0D9SG42 100 aa5.13□□□□□ -1.59
HLA-DQB1-203ENST00000399082 PRR15LQ9BU68 103 aa5.13□□□□□ -1.59
HLA-DQB1-203ENST00000399082 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
HLA-DQB1-203ENST00000399082 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
HLA-DQB1-203ENST00000399082 A8MU10 97 aa5.1□□□□□ -1.59
HLA-DQB1-203ENST00000399082 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
HLA-DQB1-203ENST00000399082 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
HLA-DQB1-203ENST00000399082 Q1T7F1 81 aa5.08□□□□□ -1.6
HLA-DQB1-203ENST00000399082 RPS28P62857 69 aaKnown RBP5.07□□□□□ -1.6
HLA-DQB1-203ENST00000399082 SMIM26A0A096LP01 95 aa5.06□□□□□ -1.6
HLA-DQB1-203ENST00000399082 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
HLA-DQB1-203ENST00000399082 PSPHP1O15172 72 aa5.03□□□□□ -1.6
HLA-DQB1-203ENST00000399082 SPINT4Q6UDR6 99 aa5.03□□□□□ -1.6
HLA-DQB1-203ENST00000399082 V9GYY9 64 aa5.03□□□□□ -1.6
HLA-DQB1-203ENST00000399082 UQCR11O14957 56 aa5.01□□□□□ -1.61
HLA-DQB1-203ENST00000399082 KMT2DO14686 5537 aa5.01□□□□□ -1.61
HLA-DQB1-203ENST00000399082 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
HLA-DQB1-203ENST00000399082 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
HLA-DQB1-203ENST00000399082 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
HLA-DQB1-203ENST00000399082 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
HLA-DQB1-203ENST00000399082 MIR22HGQ0VDD5 57 aa4.93□□□□□ -1.62
HLA-DQB1-203ENST00000399082 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
HLA-DQB1-203ENST00000399082 C10orf95Q9H7T3 257 aa4.85□□□□□ -1.63
HLA-DQB1-203ENST00000399082 MUC12Q9UKN1 5478 aa4.85□□□□□ -1.63
HLA-DQB1-203ENST00000399082 A6NED7 52 aa4.84□□□□□ -1.63
HLA-DQB1-203ENST00000399082 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.84□□□□□ -1.63
HLA-DQB1-203ENST00000399082 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
HLA-DQB1-203ENST00000399082 MDN1Q9NU22 5596 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms