RNA–Protein interactions for RNA: ENST00000397463.2

LYPD1-202, Transcript of LY6/PLAUR domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYPD1, Length 1,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD1-202ENST00000397463 LINC01558Q9Y6Z2 57 aa10.45□□□□□ -0.74
LYPD1-202ENST00000397463 S4R3F8 94 aa10.45□□□□□ -0.74
LYPD1-202ENST00000397463 LCA10Q71F78 164 aa10.44□□□□□ -0.74
LYPD1-202ENST00000397463 PSPHP1O15172 72 aa10.4□□□□□ -0.74
LYPD1-202ENST00000397463 KRTAP3-3Q9BYR6 98 aa10.4□□□□□ -0.75
LYPD1-202ENST00000397463 PRR15LQ9BU68 103 aa10.38□□□□□ -0.75
LYPD1-202ENST00000397463 KRTAP19-2Q3LHN2 52 aa10.35□□□□□ -0.75
LYPD1-202ENST00000397463 UBR4Q5T4S7 5183 aa10.34□□□□□ -0.75
LYPD1-202ENST00000397463 A0A1B0GU69 56 aa10.3□□□□□ -0.76
LYPD1-202ENST00000397463 Q5VV11 94 aa10.3□□□□□ -0.76
LYPD1-202ENST00000397463 RNF213Q63HN8 5207 aa10.23□□□□□ -0.77
LYPD1-202ENST00000397463 SEC61GP60059 68 aa10.23□□□□□ -0.77
LYPD1-202ENST00000397463 CSAG1Q6PB30 78 aa10.21□□□□□ -0.77
LYPD1-202ENST00000397463 FLGP20930 4061 aaPredicted RBP10.18□□□□□ -0.78
LYPD1-202ENST00000397463 LCE2CQ5TA81 110 aa10.09□□□□□ -0.79
LYPD1-202ENST00000397463 A6NED7 52 aa10.08□□□□□ -0.8
LYPD1-202ENST00000397463 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
LYPD1-202ENST00000397463 FAT4Q6V0I7 4981 aa10.03□□□□□ -0.8
LYPD1-202ENST00000397463 KRTAP10-6P60371 365 aaPredicted RBP10.02□□□□□ -0.8
LYPD1-202ENST00000397463 ADM2Q7Z4H4 148 aa10□□□□□ -0.81
LYPD1-202ENST00000397463 BRK1Q8WUW1 75 aa10□□□□□ -0.81
LYPD1-202ENST00000397463 UQCR11O14957 56 aa9.99□□□□□ -0.81
LYPD1-202ENST00000397463 A0A1B0GU33 70 aa9.98□□□□□ -0.81
LYPD1-202ENST00000397463 H0YAA0 97 aa9.98□□□□□ -0.81
LYPD1-202ENST00000397463 P0C880 135 aa9.96□□□□□ -0.82
LYPD1-202ENST00000397463 MT1HP80294 61 aa9.89□□□□□ -0.83
LYPD1-202ENST00000397463 CDC42SE1Q9NRR8 79 aa9.89□□□□□ -0.83
LYPD1-202ENST00000397463 MIR22HGQ0VDD5 57 aa9.88□□□□□ -0.83
LYPD1-202ENST00000397463 A8MU10 97 aa9.87□□□□□ -0.83
LYPD1-202ENST00000397463 SPATA8Q6RVD6 105 aa9.85□□□□□ -0.83
LYPD1-202ENST00000397463 M0R2T5 61 aa9.83□□□□□ -0.84
LYPD1-202ENST00000397463 PRO0628Q9UI54 55 aa9.77□□□□□ -0.85
LYPD1-202ENST00000397463 KRTAP13-4Q3LI77 160 aa9.76□□□□□ -0.85
LYPD1-202ENST00000397463 M0QZ58 72 aa9.68□□□□□ -0.86
LYPD1-202ENST00000397463 LORP23490 312 aaPredicted RBP9.67□□□□□ -0.86
LYPD1-202ENST00000397463 R4GN34 69 aa9.65□□□□□ -0.86
LYPD1-202ENST00000397463 A0A0D9SG42 100 aa9.6□□□□□ -0.87
LYPD1-202ENST00000397463 KRTAP9-8Q9BYQ0 159 aa9.53□□□□□ -0.88
LYPD1-202ENST00000397463 CRIPTQ9P021 101 aa9.53□□□□□ -0.88
LYPD1-202ENST00000397463 MT2AP02795 61 aa9.51□□□□□ -0.89
LYPD1-202ENST00000397463 LINC01554Q52M75 96 aa9.49□□□□□ -0.89
LYPD1-202ENST00000397463 LCE2AQ5TA79 106 aaPredicted RBP9.47□□□□□ -0.89
LYPD1-202ENST00000397463 MT1FP04733 61 aa9.47□□□□□ -0.89
LYPD1-202ENST00000397463 KRTAP10-10P60014 251 aa9.45□□□□□ -0.9
LYPD1-202ENST00000397463 PMAIP1Q13794 54 aa9.45□□□□□ -0.9
LYPD1-202ENST00000397463 K7ERS5 55 aa9.42□□□□□ -0.9
LYPD1-202ENST00000397463 KRTAP12-1P59990 96 aa9.38□□□□□ -0.91
LYPD1-202ENST00000397463 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
LYPD1-202ENST00000397463 A6NN06 94 aa9.37□□□□□ -0.91
LYPD1-202ENST00000397463 SPINT4Q6UDR6 99 aa9.37□□□□□ -0.91
LYPD1-202ENST00000397463 SPRR2GQ9BYE4 73 aa9.34□□□□□ -0.91
LYPD1-202ENST00000397463 KRTAP19-1Q8IUB9 90 aa9.31□□□□□ -0.92
LYPD1-202ENST00000397463 KRTAP9-3Q9BYQ3 159 aa9.19□□□□□ -0.94
LYPD1-202ENST00000397463 KRTAP19-8Q3LI54 63 aa9.07□□□□□ -0.96
LYPD1-202ENST00000397463 KTN1-AS1Q86SY8 53 aa9.05□□□□□ -0.96
LYPD1-202ENST00000397463 ROMO1P60602 79 aa9.04□□□□□ -0.96
LYPD1-202ENST00000397463 CAMK2N1Q7Z7J9 78 aa9.04□□□□□ -0.96
LYPD1-202ENST00000397463 PLAC4Q8WY50 150 aa9.04□□□□□ -0.96
LYPD1-202ENST00000397463 SVIPQ8NHG7 77 aa8.97□□□□□ -0.97
LYPD1-202ENST00000397463 MT1BP07438 61 aa8.96□□□□□ -0.98
LYPD1-202ENST00000397463 LCE2BO14633 110 aa8.93□□□□□ -0.98
LYPD1-202ENST00000397463 C10orf95Q9H7T3 257 aa8.89□□□□□ -0.99
LYPD1-202ENST00000397463 PRAC1Q96KF2 57 aa8.85□□□□□ -0.99
LYPD1-202ENST00000397463 USH2AO75445 5202 aa8.7□□□□□ -1.02
LYPD1-202ENST00000397463 MT1XP80297 61 aa8.68□□□□□ -1.02
LYPD1-202ENST00000397463 KRTAP10-5P60370 271 aa8.68□□□□□ -1.02
LYPD1-202ENST00000397463 KRTAP25-1Q3LHN0 102 aa8.64□□□□□ -1.03
LYPD1-202ENST00000397463 TNP1P09430 55 aa8.6□□□□□ -1.03
LYPD1-202ENST00000397463 PRO2289Q9P1D8 64 aa8.59□□□□□ -1.03
LYPD1-202ENST00000397463 LCE2DQ5TA82 110 aaPredicted RBP8.57□□□□□ -1.04
LYPD1-202ENST00000397463 SSPOA2VEC9 5147 aa8.43□□□□□ -1.06
LYPD1-202ENST00000397463 FSIP2Q5CZC0 6907 aa8.42□□□□□ -1.06
LYPD1-202ENST00000397463 KRTAP19-6Q3LI70 58 aa8.36□□□□□ -1.07
LYPD1-202ENST00000397463 KRTAP10-7P60409 375 aaPredicted RBP8.35□□□□□ -1.07
LYPD1-202ENST00000397463 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
LYPD1-202ENST00000397463 KRTAP23-1A1A580 65 aa8.32□□□□□ -1.08
LYPD1-202ENST00000397463 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
LYPD1-202ENST00000397463 LCE3AQ5TA76 89 aa8.23□□□□□ -1.09
LYPD1-202ENST00000397463 KRTAP9-2Q9BYQ4 174 aa8.23□□□□□ -1.09
LYPD1-202ENST00000397463 KRTAP8-1Q8IUC2 63 aa8.06□□□□□ -1.12
LYPD1-202ENST00000397463 FCGBPQ9Y6R7 5405 aaPredicted RBP8.05□□□□□ -1.12
LYPD1-202ENST00000397463 KMT2DO14686 5537 aa8.04□□□□□ -1.12
LYPD1-202ENST00000397463 KRTAP4-8A0A0G2JLE6 195 aa8.02□□□□□ -1.13
LYPD1-202ENST00000397463 KRTAP4-8Q9BYQ9 185 aa8.02□□□□□ -1.13
LYPD1-202ENST00000397463 CRCT1Q9UGL9 99 aa7.95□□□□□ -1.14
LYPD1-202ENST00000397463 KRTAP12-3P60328 96 aa7.91□□□□□ -1.14
LYPD1-202ENST00000397463 KRTAP19-5Q3LI72 72 aa7.86□□□□□ -1.15
LYPD1-202ENST00000397463 KRTAP19-7Q3SYF9 63 aa7.75□□□□□ -1.17
LYPD1-202ENST00000397463 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
LYPD1-202ENST00000397463 MACF1Q9UPN3 7388 aaKnown RBP7.7□□□□□ -1.18
LYPD1-202ENST00000397463 MT1EP04732 61 aa7.61□□□□□ -1.19
LYPD1-202ENST00000397463 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
LYPD1-202ENST00000397463 SYNE2Q8WXH0 6885 aaKnown RBP7.5□□□□□ -1.21
LYPD1-202ENST00000397463 MT1LQ93083 61 aa7.46□□□□□ -1.22
LYPD1-202ENST00000397463 SPRR2FQ96RM1 72 aa7.45□□□□□ -1.22
LYPD1-202ENST00000397463 SPRR5A0A1B0GTR4 108 aa7.41□□□□□ -1.22
LYPD1-202ENST00000397463 MUC12Q9UKN1 5478 aa7.4□□□□□ -1.22
LYPD1-202ENST00000397463 LCE3CQ5T5A8 94 aa7.38□□□□□ -1.23
LYPD1-202ENST00000397463 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
LYPD1-202ENST00000397463 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms