RNA–Protein interactions for RNA: ENST00000397317.8

CLDN7-202, Transcript of claudin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN7, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-202ENST00000397317 LCA10Q71F78 164 aa8.44□□□□□ -1.06
CLDN7-202ENST00000397317 CSAG1Q6PB30 78 aa8.43□□□□□ -1.06
CLDN7-202ENST00000397317 TRAV7A0A075B6U4 112 aa8.42□□□□□ -1.06
CLDN7-202ENST00000397317 A8MUN3 132 aa8.42□□□□□ -1.06
CLDN7-202ENST00000397317 KRTAP9-3Q9BYQ3 159 aa8.38□□□□□ -1.07
CLDN7-202ENST00000397317 SSPOA2VEC9 5147 aa8.36□□□□□ -1.07
CLDN7-202ENST00000397317 USH2AO75445 5202 aa8.35□□□□□ -1.07
CLDN7-202ENST00000397317 NDUFC1O43677 76 aa8.3□□□□□ -1.08
CLDN7-202ENST00000397317 LCE2BO14633 110 aa8.26□□□□□ -1.09
CLDN7-202ENST00000397317 DMAC1Q96GE9 116 aa8.26□□□□□ -1.09
CLDN7-202ENST00000397317 SERP2Q8N6R1 65 aa8.25□□□□□ -1.09
CLDN7-202ENST00000397317 FCGBPQ9Y6R7 5405 aaPredicted RBP8.19□□□□□ -1.1
CLDN7-202ENST00000397317 SNURFQ9Y675 71 aa8.19□□□□□ -1.1
CLDN7-202ENST00000397317 C20orf197Q8N268 126 aa8.17□□□□□ -1.1
CLDN7-202ENST00000397317 H0YAA0 97 aa8.15□□□□□ -1.1
CLDN7-202ENST00000397317 ACYP2P14621 99 aa8.13□□□□□ -1.11
CLDN7-202ENST00000397317 KRTAP19-1Q8IUB9 90 aa8.08□□□□□ -1.12
CLDN7-202ENST00000397317 SPANXA2-OT1Q8N9U9 137 aa8.08□□□□□ -1.12
CLDN7-202ENST00000397317 CRIPTQ9P021 101 aa8.08□□□□□ -1.12
CLDN7-202ENST00000397317 COX7CP15954 63 aa8.07□□□□□ -1.12
CLDN7-202ENST00000397317 SPRR2GQ9BYE4 73 aa8.05□□□□□ -1.12
CLDN7-202ENST00000397317 ADM2Q7Z4H4 148 aa8.04□□□□□ -1.12
CLDN7-202ENST00000397317 SYNE2Q8WXH0 6885 aaKnown RBP8.03□□□□□ -1.12
CLDN7-202ENST00000397317 SPTSSBQ8NFR3 76 aa8.01□□□□□ -1.13
CLDN7-202ENST00000397317 CHKB-CPT1BH3BT56 60 aa7.98□□□□□ -1.13
CLDN7-202ENST00000397317 MACF1Q9UPN3 7388 aaKnown RBP7.98□□□□□ -1.13
CLDN7-202ENST00000397317 KRTAP19-8Q3LI54 63 aa7.95□□□□□ -1.14
CLDN7-202ENST00000397317 KRTAP19-6Q3LI70 58 aa7.95□□□□□ -1.14
CLDN7-202ENST00000397317 Q5VV11 94 aa7.94□□□□□ -1.14
CLDN7-202ENST00000397317 ANAPC13Q9BS18 74 aa7.94□□□□□ -1.14
CLDN7-202ENST00000397317 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
CLDN7-202ENST00000397317 MT1BP07438 61 aa7.88□□□□□ -1.15
CLDN7-202ENST00000397317 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
CLDN7-202ENST00000397317 H7BZZ5 65 aa7.87□□□□□ -1.15
CLDN7-202ENST00000397317 P0C880 135 aa7.87□□□□□ -1.15
CLDN7-202ENST00000397317 CYSTM1Q9H1C7 97 aa7.84□□□□□ -1.15
CLDN7-202ENST00000397317 R4GN34 69 aa7.83□□□□□ -1.16
CLDN7-202ENST00000397317 COA5Q86WW8 74 aa7.81□□□□□ -1.16
CLDN7-202ENST00000397317 M0QZ58 72 aa7.77□□□□□ -1.17
CLDN7-202ENST00000397317 CCDC179H3BU77 68 aa7.74□□□□□ -1.17
CLDN7-202ENST00000397317 A6NN06 94 aa7.71□□□□□ -1.18
CLDN7-202ENST00000397317 KRTAP6-3Q3LI67 103 aa7.7□□□□□ -1.18
CLDN7-202ENST00000397317 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
CLDN7-202ENST00000397317 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
CLDN7-202ENST00000397317 ATP5EP56381 51 aaPredicted RBP7.63□□□□□ -1.19
CLDN7-202ENST00000397317 LINC01554Q52M75 96 aa7.63□□□□□ -1.19
CLDN7-202ENST00000397317 SEC61GP60059 68 aa7.61□□□□□ -1.19
CLDN7-202ENST00000397317 SERP1Q9Y6X1 66 aa7.58□□□□□ -1.2
CLDN7-202ENST00000397317 NEBP20929 6669 aa7.57□□□□□ -1.2
CLDN7-202ENST00000397317 PRO2289Q9P1D8 64 aa7.55□□□□□ -1.2
CLDN7-202ENST00000397317 TMEM258P61165 79 aa7.52□□□□□ -1.21
CLDN7-202ENST00000397317 KRTAP20-1Q3LI63 56 aa7.48□□□□□ -1.21
CLDN7-202ENST00000397317 MT1XP80297 61 aa7.47□□□□□ -1.21
CLDN7-202ENST00000397317 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.22
CLDN7-202ENST00000397317 MUC12Q9UKN1 5478 aa7.46□□□□□ -1.22
CLDN7-202ENST00000397317 A0A1B0GU69 56 aa7.43□□□□□ -1.22
CLDN7-202ENST00000397317 A0A1B0GU33 70 aa7.42□□□□□ -1.22
CLDN7-202ENST00000397317 SPATA8Q6RVD6 105 aa7.33□□□□□ -1.24
CLDN7-202ENST00000397317 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
CLDN7-202ENST00000397317 A0A0D9SG42 100 aa7.29□□□□□ -1.24
CLDN7-202ENST00000397317 LINC01558Q9Y6Z2 57 aa7.28□□□□□ -1.24
CLDN7-202ENST00000397317 KRTAP12-2P59991 146 aa7.27□□□□□ -1.25
CLDN7-202ENST00000397317 CAMK2N1Q7Z7J9 78 aa7.26□□□□□ -1.25
CLDN7-202ENST00000397317 SMIM26A0A096LP01 95 aa7.23□□□□□ -1.25
CLDN7-202ENST00000397317 KRTAP5-9P26371 169 aa7.23□□□□□ -1.25
CLDN7-202ENST00000397317 KMT2DO14686 5537 aa7.22□□□□□ -1.25
CLDN7-202ENST00000397317 MDN1Q9NU22 5596 aa7.19□□□□□ -1.26
CLDN7-202ENST00000397317 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
CLDN7-202ENST00000397317 KRTAP12-1P59990 96 aa7.15□□□□□ -1.26
CLDN7-202ENST00000397317 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
CLDN7-202ENST00000397317 A8MU10 97 aa7.11□□□□□ -1.27
CLDN7-202ENST00000397317 PCP4P48539 62 aa7.11□□□□□ -1.27
CLDN7-202ENST00000397317 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
CLDN7-202ENST00000397317 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
CLDN7-202ENST00000397317 V9GYY9 64 aa7.08□□□□□ -1.28
CLDN7-202ENST00000397317 UQCR11O14957 56 aa7.07□□□□□ -1.28
CLDN7-202ENST00000397317 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
CLDN7-202ENST00000397317 KRTAP2-3P0C7H8 128 aa7.05□□□□□ -1.28
CLDN7-202ENST00000397317 KRTAP2-4Q9BYR9 128 aa7.05□□□□□ -1.28
CLDN7-202ENST00000397317 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
CLDN7-202ENST00000397317 Q1T7F1 81 aa7.01□□□□□ -1.29
CLDN7-202ENST00000397317 SPRR2FQ96RM1 72 aa7□□□□□ -1.29
CLDN7-202ENST00000397317 PSPHP1O15172 72 aa6.94□□□□□ -1.3
CLDN7-202ENST00000397317 RPS28P62857 69 aaKnown RBP6.93□□□□□ -1.3
CLDN7-202ENST00000397317 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
CLDN7-202ENST00000397317 SPRR2EP22531 72 aa6.84□□□□□ -1.31
CLDN7-202ENST00000397317 SPRR2BP35325 72 aa6.84□□□□□ -1.31
CLDN7-202ENST00000397317 SPRR2AP35326 72 aa6.84□□□□□ -1.31
CLDN7-202ENST00000397317 C10orf95Q9H7T3 257 aa6.8□□□□□ -1.32
CLDN7-202ENST00000397317 K7ERS5 55 aa6.78□□□□□ -1.32
CLDN7-202ENST00000397317 LCE1AQ5T7P2 110 aa6.78□□□□□ -1.32
CLDN7-202ENST00000397317 TNP1P09430 55 aa6.77□□□□□ -1.33
CLDN7-202ENST00000397317 KRTAP2-2Q9BYT5 123 aa6.77□□□□□ -1.33
CLDN7-202ENST00000397317 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
CLDN7-202ENST00000397317 A6NED7 52 aa6.75□□□□□ -1.33
CLDN7-202ENST00000397317 LCE3BQ5TA77 95 aa6.71□□□□□ -1.34
CLDN7-202ENST00000397317 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
CLDN7-202ENST00000397317 GPR98Q8WXG9 6306 aa6.67□□□□□ -1.34
CLDN7-202ENST00000397317 KRTAP9-9Q9BYP9 154 aa6.63□□□□□ -1.35
CLDN7-202ENST00000397317 KRTAP9-4Q9BYQ2 154 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms