RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MPLKIPQ8TAP9 179 aa7.35□□□□□ -1.23
SEC13-208ENST00000397109 IGKV2D-30A0A075B6S6 120 aa7.32□□□□□ -1.24
SEC13-208ENST00000397109 ACYP2P14621 99 aa7.32□□□□□ -1.24
SEC13-208ENST00000397109 SPINK7P58062 85 aa7.3□□□□□ -1.24
SEC13-208ENST00000397109 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
SEC13-208ENST00000397109 COA5Q86WW8 74 aa7.28□□□□□ -1.24
SEC13-208ENST00000397109 V9GYY9 64 aa7.28□□□□□ -1.24
SEC13-208ENST00000397109 A8MUN3 132 aa7.27□□□□□ -1.25
SEC13-208ENST00000397109 Q1T7F1 81 aa7.25□□□□□ -1.25
SEC13-208ENST00000397109 CRCT1Q9UGL9 99 aa7.24□□□□□ -1.25
SEC13-208ENST00000397109 KRTAP9-8Q9BYQ0 159 aa7.21□□□□□ -1.26
SEC13-208ENST00000397109 FSIP2Q5CZC0 6907 aa7.18□□□□□ -1.26
SEC13-208ENST00000397109 CHKB-CPT1BH3BT56 60 aa7.16□□□□□ -1.26
SEC13-208ENST00000397109 C4orf26Q17RF5 130 aa7.13□□□□□ -1.27
SEC13-208ENST00000397109 MT2AP02795 61 aa7.11□□□□□ -1.27
SEC13-208ENST00000397109 LINC01558Q9Y6Z2 57 aa7.11□□□□□ -1.27
SEC13-208ENST00000397109 SPTSSBQ8NFR3 76 aa7.08□□□□□ -1.28
SEC13-208ENST00000397109 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
SEC13-208ENST00000397109 H1FX-AS1Q4G0G2 97 aa7.05□□□□□ -1.28
SEC13-208ENST00000397109 MT1FP04733 61 aa7.04□□□□□ -1.28
SEC13-208ENST00000397109 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
SEC13-208ENST00000397109 PRR15LQ9BU68 103 aa6.99□□□□□ -1.29
SEC13-208ENST00000397109 PSPHP1O15172 72 aa6.98□□□□□ -1.29
SEC13-208ENST00000397109 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
SEC13-208ENST00000397109 Q5VV11 94 aa6.97□□□□□ -1.29
SEC13-208ENST00000397109 USH2AO75445 5202 aa6.96□□□□□ -1.3
SEC13-208ENST00000397109 A0A1B0GU69 56 aa6.92□□□□□ -1.3
SEC13-208ENST00000397109 LCE2BO14633 110 aa6.92□□□□□ -1.3
SEC13-208ENST00000397109 SEC61GP60059 68 aa6.89□□□□□ -1.31
SEC13-208ENST00000397109 SSPOA2VEC9 5147 aa6.86□□□□□ -1.31
SEC13-208ENST00000397109 BRK1Q8WUW1 75 aa6.84□□□□□ -1.31
SEC13-208ENST00000397109 PRO0628Q9UI54 55 aa6.84□□□□□ -1.31
SEC13-208ENST00000397109 S4R3F8 94 aa6.84□□□□□ -1.31
SEC13-208ENST00000397109 A6NED7 52 aa6.83□□□□□ -1.32
SEC13-208ENST00000397109 LCA10Q71F78 164 aa6.79□□□□□ -1.32
SEC13-208ENST00000397109 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
SEC13-208ENST00000397109 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
SEC13-208ENST00000397109 UQCR11O14957 56 aa6.78□□□□□ -1.32
SEC13-208ENST00000397109 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
SEC13-208ENST00000397109 CDC42SE1Q9NRR8 79 aa6.78□□□□□ -1.32
SEC13-208ENST00000397109 FCGBPQ9Y6R7 5405 aaPredicted RBP6.74□□□□□ -1.33
SEC13-208ENST00000397109 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
SEC13-208ENST00000397109 SPATA8Q6RVD6 105 aa6.72□□□□□ -1.33
SEC13-208ENST00000397109 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
SEC13-208ENST00000397109 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
SEC13-208ENST00000397109 A0A1B0GU33 70 aa6.66□□□□□ -1.34
SEC13-208ENST00000397109 H0YAA0 97 aa6.65□□□□□ -1.35
SEC13-208ENST00000397109 KRTAP9-7A8MTY7 169 aa6.63□□□□□ -1.35
SEC13-208ENST00000397109 SVIPQ8NHG7 77 aa6.61□□□□□ -1.35
SEC13-208ENST00000397109 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
SEC13-208ENST00000397109 SPRR2GQ9BYE4 73 aa6.57□□□□□ -1.36
SEC13-208ENST00000397109 A8MU10 97 aa6.56□□□□□ -1.36
SEC13-208ENST00000397109 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
SEC13-208ENST00000397109 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
SEC13-208ENST00000397109 KRTAP19-8Q3LI54 63 aa6.52□□□□□ -1.37
SEC13-208ENST00000397109 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
SEC13-208ENST00000397109 MT1BP07438 61 aa6.49□□□□□ -1.37
SEC13-208ENST00000397109 M0QZ58 72 aa6.48□□□□□ -1.37
SEC13-208ENST00000397109 P0C880 135 aa6.47□□□□□ -1.37
SEC13-208ENST00000397109 MACF1Q9UPN3 7388 aaKnown RBP6.44□□□□□ -1.38
SEC13-208ENST00000397109 A6NN06 94 aa6.43□□□□□ -1.38
SEC13-208ENST00000397109 K7ERS5 55 aa6.42□□□□□ -1.38
SEC13-208ENST00000397109 SYNE2Q8WXH0 6885 aaKnown RBP6.37□□□□□ -1.39
SEC13-208ENST00000397109 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
SEC13-208ENST00000397109 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
SEC13-208ENST00000397109 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.4
SEC13-208ENST00000397109 R4GN34 69 aa6.33□□□□□ -1.4
SEC13-208ENST00000397109 KTN1-AS1Q86SY8 53 aa6.3□□□□□ -1.4
SEC13-208ENST00000397109 A0A0D9SG42 100 aa6.26□□□□□ -1.41
SEC13-208ENST00000397109 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
SEC13-208ENST00000397109 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
SEC13-208ENST00000397109 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
SEC13-208ENST00000397109 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
SEC13-208ENST00000397109 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.42
SEC13-208ENST00000397109 ROMO1P60602 79 aa6.12□□□□□ -1.43
SEC13-208ENST00000397109 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
SEC13-208ENST00000397109 MT1XP80297 61 aa6.09□□□□□ -1.43
SEC13-208ENST00000397109 KRTAP5-9P26371 169 aa6.06□□□□□ -1.44
SEC13-208ENST00000397109 MUC12Q9UKN1 5478 aa6.02□□□□□ -1.45
SEC13-208ENST00000397109 NEBP20929 6669 aa6□□□□□ -1.45
SEC13-208ENST00000397109 PRAC1Q96KF2 57 aa5.96□□□□□ -1.46
SEC13-208ENST00000397109 KMT2DO14686 5537 aa5.95□□□□□ -1.46
SEC13-208ENST00000397109 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
SEC13-208ENST00000397109 KRTAP25-1Q3LHN0 102 aa5.91□□□□□ -1.46
SEC13-208ENST00000397109 MDN1Q9NU22 5596 aa5.9□□□□□ -1.47
SEC13-208ENST00000397109 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.47
SEC13-208ENST00000397109 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
SEC13-208ENST00000397109 C10orf95Q9H7T3 257 aa5.84□□□□□ -1.47
SEC13-208ENST00000397109 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
SEC13-208ENST00000397109 KRTAP10-7P60409 375 aaPredicted RBP5.81□□□□□ -1.48
SEC13-208ENST00000397109 KRTAP10-12P60413 245 aa5.81□□□□□ -1.48
SEC13-208ENST00000397109 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
SEC13-208ENST00000397109 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
SEC13-208ENST00000397109 SPRR2EP22531 72 aa5.79□□□□□ -1.48
SEC13-208ENST00000397109 SPRR2BP35325 72 aa5.79□□□□□ -1.48
SEC13-208ENST00000397109 SPRR2AP35326 72 aa5.79□□□□□ -1.48
SEC13-208ENST00000397109 TNP1P09430 55 aa5.71□□□□□ -1.49
SEC13-208ENST00000397109 LCE1AQ5T7P2 110 aa5.71□□□□□ -1.49
SEC13-208ENST00000397109 PP632Q6XCG6 107 aa5.71□□□□□ -1.49
SEC13-208ENST00000397109 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms