RNA–Protein interactions for RNA: ENST00000396830.2

IFFO1-203, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-203ENST00000396830 COX6B2Q6YFQ2 88 aa9.37□□□□□ -0.91
IFFO1-203ENST00000396830 A0A1B0GU69 56 aa9.37□□□□□ -0.91
IFFO1-203ENST00000396830 LPAP08519 4548 aa9.35□□□□□ -0.91
IFFO1-203ENST00000396830 HERC1Q15751 4861 aa9.35□□□□□ -0.91
IFFO1-203ENST00000396830 KRTAP3-1Q9BYR8 98 aa9.34□□□□□ -0.91
IFFO1-203ENST00000396830 SEC61GP60059 68 aa9.25□□□□□ -0.93
IFFO1-203ENST00000396830 LRP2P98164 4655 aa9.23□□□□□ -0.93
IFFO1-203ENST00000396830 HMCN2Q8NDA2 5059 aa9.22□□□□□ -0.93
IFFO1-203ENST00000396830 PMAIP1Q13794 54 aa9.21□□□□□ -0.94
IFFO1-203ENST00000396830 UQCR11O14957 56 aa9.17□□□□□ -0.94
IFFO1-203ENST00000396830 A6NN06 94 aa9.15□□□□□ -0.94
IFFO1-203ENST00000396830 SPATA8Q6RVD6 105 aa9.15□□□□□ -0.94
IFFO1-203ENST00000396830 SEC61BP60468 96 aaKnown RBP9.09□□□□□ -0.95
IFFO1-203ENST00000396830 MIR22HGQ0VDD5 57 aa9.07□□□□□ -0.96
IFFO1-203ENST00000396830 S4R3F8 94 aa9.06□□□□□ -0.96
IFFO1-203ENST00000396830 RBM12B-AS1Q9P1G2 102 aa9.05□□□□□ -0.96
IFFO1-203ENST00000396830 H1FX-AS1Q4G0G2 97 aa9.04□□□□□ -0.96
IFFO1-203ENST00000396830 MUC17Q685J3 4493 aa9.04□□□□□ -0.96
IFFO1-203ENST00000396830 KTN1-AS1Q86SY8 53 aa9.04□□□□□ -0.96
IFFO1-203ENST00000396830 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.97
IFFO1-203ENST00000396830 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
IFFO1-203ENST00000396830 A0A1B0GU33 70 aa8.96□□□□□ -0.98
IFFO1-203ENST00000396830 H0YAA0 97 aa8.84□□□□□ -0.99
IFFO1-203ENST00000396830 CSAG1Q6PB30 78 aa8.83□□□□□ -1
IFFO1-203ENST00000396830 UBR4Q5T4S7 5183 aa8.82□□□□□ -1
IFFO1-203ENST00000396830 KRTAP10-6P60371 365 aaPredicted RBP8.8□□□□□ -1
IFFO1-203ENST00000396830 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
IFFO1-203ENST00000396830 RNF213Q63HN8 5207 aa8.74□□□□□ -1.01
IFFO1-203ENST00000396830 MUC2Q02817 5179 aa8.74□□□□□ -1.01
IFFO1-203ENST00000396830 KRTAP19-2Q3LHN2 52 aa8.73□□□□□ -1.01
IFFO1-203ENST00000396830 ADM2Q7Z4H4 148 aa8.68□□□□□ -1.02
IFFO1-203ENST00000396830 K7ERS5 55 aa8.66□□□□□ -1.02
IFFO1-203ENST00000396830 P0C880 135 aa8.65□□□□□ -1.02
IFFO1-203ENST00000396830 LCE2CQ5TA81 110 aa8.6□□□□□ -1.03
IFFO1-203ENST00000396830 PRAC1Q96KF2 57 aa8.59□□□□□ -1.03
IFFO1-203ENST00000396830 KRTAP13-4Q3LI77 160 aa8.57□□□□□ -1.04
IFFO1-203ENST00000396830 M0QZ58 72 aa8.56□□□□□ -1.04
IFFO1-203ENST00000396830 A0A0D9SG42 100 aa8.46□□□□□ -1.05
IFFO1-203ENST00000396830 FLGP20930 4061 aaPredicted RBP8.43□□□□□ -1.06
IFFO1-203ENST00000396830 FAT4Q6V0I7 4981 aa8.42□□□□□ -1.06
IFFO1-203ENST00000396830 MT1HP80294 61 aa8.41□□□□□ -1.06
IFFO1-203ENST00000396830 R4GN34 69 aa8.38□□□□□ -1.07
IFFO1-203ENST00000396830 KRTAP12-1P59990 96 aa8.31□□□□□ -1.08
IFFO1-203ENST00000396830 ROMO1P60602 79 aa8.31□□□□□ -1.08
IFFO1-203ENST00000396830 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
IFFO1-203ENST00000396830 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
IFFO1-203ENST00000396830 KRTAP25-1Q3LHN0 102 aa8.28□□□□□ -1.08
IFFO1-203ENST00000396830 M0R2T5 61 aa8.27□□□□□ -1.08
IFFO1-203ENST00000396830 SPINT4Q6UDR6 99 aa8.27□□□□□ -1.08
IFFO1-203ENST00000396830 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
IFFO1-203ENST00000396830 LORP23490 312 aaPredicted RBP8.2□□□□□ -1.1
IFFO1-203ENST00000396830 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
IFFO1-203ENST00000396830 KRTAP9-8Q9BYQ0 159 aa8.09□□□□□ -1.11
IFFO1-203ENST00000396830 MT2AP02795 61 aa8.05□□□□□ -1.12
IFFO1-203ENST00000396830 MT1FP04733 61 aa8.01□□□□□ -1.13
IFFO1-203ENST00000396830 KRTAP10-10P60014 251 aa7.95□□□□□ -1.14
IFFO1-203ENST00000396830 CAMK2N1Q7Z7J9 78 aa7.89□□□□□ -1.15
IFFO1-203ENST00000396830 SPRR2GQ9BYE4 73 aa7.89□□□□□ -1.15
IFFO1-203ENST00000396830 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
IFFO1-203ENST00000396830 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
IFFO1-203ENST00000396830 KRTAP9-3Q9BYQ3 159 aa7.8□□□□□ -1.16
IFFO1-203ENST00000396830 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
IFFO1-203ENST00000396830 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
IFFO1-203ENST00000396830 LCE2BO14633 110 aa7.63□□□□□ -1.19
IFFO1-203ENST00000396830 KRTAP19-8Q3LI54 63 aa7.62□□□□□ -1.19
IFFO1-203ENST00000396830 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
IFFO1-203ENST00000396830 TNP1P09430 55 aa7.59□□□□□ -1.19
IFFO1-203ENST00000396830 MT1BP07438 61 aa7.54□□□□□ -1.2
IFFO1-203ENST00000396830 KRTAP23-1A1A580 65 aa7.53□□□□□ -1.2
IFFO1-203ENST00000396830 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
IFFO1-203ENST00000396830 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
IFFO1-203ENST00000396830 USH2AO75445 5202 aa7.41□□□□□ -1.22
IFFO1-203ENST00000396830 FSIP2Q5CZC0 6907 aa7.37□□□□□ -1.23
IFFO1-203ENST00000396830 KRTAP9-6A0A140TA67 174 aa7.36□□□□□ -1.23
IFFO1-203ENST00000396830 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
IFFO1-203ENST00000396830 MT1XP80297 61 aa7.28□□□□□ -1.24
IFFO1-203ENST00000396830 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
IFFO1-203ENST00000396830 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
IFFO1-203ENST00000396830 SSPOA2VEC9 5147 aa7.19□□□□□ -1.26
IFFO1-203ENST00000396830 H3BS24 57 aa7.16□□□□□ -1.26
IFFO1-203ENST00000396830 KRTAP19-6Q3LI70 58 aa7.15□□□□□ -1.26
IFFO1-203ENST00000396830 LCE3AQ5TA76 89 aa7.13□□□□□ -1.27
IFFO1-203ENST00000396830 NDUFAF8A1L188 74 aa7.11□□□□□ -1.27
IFFO1-203ENST00000396830 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
IFFO1-203ENST00000396830 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
IFFO1-203ENST00000396830 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
IFFO1-203ENST00000396830 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
IFFO1-203ENST00000396830 FCGBPQ9Y6R7 5405 aaPredicted RBP6.92□□□□□ -1.3
IFFO1-203ENST00000396830 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
IFFO1-203ENST00000396830 LUZP6Q538Z0 58 aa6.85□□□□□ -1.31
IFFO1-203ENST00000396830 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
IFFO1-203ENST00000396830 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
IFFO1-203ENST00000396830 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
IFFO1-203ENST00000396830 KMT2DO14686 5537 aa6.67□□□□□ -1.34
IFFO1-203ENST00000396830 KRTAP19-5Q3LI72 72 aa6.67□□□□□ -1.34
IFFO1-203ENST00000396830 KRTAP9-7A8MTY7 169 aa6.63□□□□□ -1.35
IFFO1-203ENST00000396830 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
IFFO1-203ENST00000396830 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
IFFO1-203ENST00000396830 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
IFFO1-203ENST00000396830 KRTAP19-7Q3SYF9 63 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms