RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 KRTAP9-8Q9BYQ0 159 aa10.16□□□□□ -0.78
FXN-202ENST00000396364 MT2AP02795 61 aa10.1□□□□□ -0.79
FXN-202ENST00000396364 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
FXN-202ENST00000396364 KRTAP10-10P60014 251 aa10.07□□□□□ -0.8
FXN-202ENST00000396364 SPTSSBQ8NFR3 76 aa10.03□□□□□ -0.8
FXN-202ENST00000396364 CHKB-CPT1BH3BT56 60 aa10.02□□□□□ -0.81
FXN-202ENST00000396364 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
FXN-202ENST00000396364 H7BZZ5 65 aa10.01□□□□□ -0.81
FXN-202ENST00000396364 MT1FP04733 61 aa10□□□□□ -0.81
FXN-202ENST00000396364 CCDC179H3BU77 68 aa9.98□□□□□ -0.81
FXN-202ENST00000396364 KRTAP9-2Q9BYQ4 174 aa9.95□□□□□ -0.82
FXN-202ENST00000396364 CYSTM1Q9H1C7 97 aa9.95□□□□□ -0.82
FXN-202ENST00000396364 H0YAA0 97 aa9.93□□□□□ -0.82
FXN-202ENST00000396364 ATP5EP56381 51 aaPredicted RBP9.85□□□□□ -0.83
FXN-202ENST00000396364 COA5Q86WW8 74 aa9.84□□□□□ -0.83
FXN-202ENST00000396364 KRTAP9-3Q9BYQ3 159 aa9.83□□□□□ -0.84
FXN-202ENST00000396364 ADM2Q7Z4H4 148 aa9.8□□□□□ -0.84
FXN-202ENST00000396364 CRIPTQ9P021 101 aa9.79□□□□□ -0.84
FXN-202ENST00000396364 TMEM258P61165 79 aa9.75□□□□□ -0.85
FXN-202ENST00000396364 LCE2BO14633 110 aa9.63□□□□□ -0.87
FXN-202ENST00000396364 SPRR2GQ9BYE4 73 aa9.62□□□□□ -0.87
FXN-202ENST00000396364 SEC61GP60059 68 aa9.6□□□□□ -0.87
FXN-202ENST00000396364 P0C880 135 aa9.58□□□□□ -0.88
FXN-202ENST00000396364 KRTAP19-1Q8IUB9 90 aa9.58□□□□□ -0.88
FXN-202ENST00000396364 R4GN34 69 aa9.58□□□□□ -0.88
FXN-202ENST00000396364 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
FXN-202ENST00000396364 PCP4P48539 62 aa9.55□□□□□ -0.88
FXN-202ENST00000396364 SERP1Q9Y6X1 66 aa9.54□□□□□ -0.88
FXN-202ENST00000396364 CRCT1Q9UGL9 99 aa9.53□□□□□ -0.88
FXN-202ENST00000396364 FSIP2Q5CZC0 6907 aa9.52□□□□□ -0.89
FXN-202ENST00000396364 M0QZ58 72 aa9.49□□□□□ -0.89
FXN-202ENST00000396364 Q5VV11 94 aa9.49□□□□□ -0.89
FXN-202ENST00000396364 KRTAP9-6A0A140TA67 174 aa9.45□□□□□ -0.9
FXN-202ENST00000396364 KRTAP19-8Q3LI54 63 aa9.45□□□□□ -0.9
FXN-202ENST00000396364 USH2AO75445 5202 aa9.45□□□□□ -0.9
FXN-202ENST00000396364 A0A1B0GU69 56 aa9.39□□□□□ -0.91
FXN-202ENST00000396364 PRR15LQ9BU68 103 aa9.35□□□□□ -0.91
FXN-202ENST00000396364 MT1BP07438 61 aa9.32□□□□□ -0.92
FXN-202ENST00000396364 LINC01554Q52M75 96 aa9.31□□□□□ -0.92
FXN-202ENST00000396364 PLAC4Q8WY50 150 aa9.28□□□□□ -0.92
FXN-202ENST00000396364 A0A1B0GU33 70 aa9.27□□□□□ -0.93
FXN-202ENST00000396364 KRTAP19-6Q3LI70 58 aa9.27□□□□□ -0.93
FXN-202ENST00000396364 LINC01558Q9Y6Z2 57 aa9.26□□□□□ -0.93
FXN-202ENST00000396364 SSPOA2VEC9 5147 aa9.23□□□□□ -0.93
FXN-202ENST00000396364 V9GYY9 64 aa9.19□□□□□ -0.94
FXN-202ENST00000396364 A6NN06 94 aa9.15□□□□□ -0.94
FXN-202ENST00000396364 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
FXN-202ENST00000396364 RPS28P62857 69 aaKnown RBP9.11□□□□□ -0.95
FXN-202ENST00000396364 SMIM26A0A096LP01 95 aa9.1□□□□□ -0.95
FXN-202ENST00000396364 SPATA8Q6RVD6 105 aa9.09□□□□□ -0.95
FXN-202ENST00000396364 PRO2289Q9P1D8 64 aa9.08□□□□□ -0.96
FXN-202ENST00000396364 KRTAP10-5P60370 271 aa9.05□□□□□ -0.96
FXN-202ENST00000396364 Q1T7F1 81 aa9.05□□□□□ -0.96
FXN-202ENST00000396364 A0A0D9SG42 100 aa9.02□□□□□ -0.97
FXN-202ENST00000396364 UQCR11O14957 56 aa9□□□□□ -0.97
FXN-202ENST00000396364 FCGBPQ9Y6R7 5405 aaPredicted RBP9□□□□□ -0.97
FXN-202ENST00000396364 PSPHP1O15172 72 aa8.92□□□□□ -0.98
FXN-202ENST00000396364 CAMK2N1Q7Z7J9 78 aa8.91□□□□□ -0.98
FXN-202ENST00000396364 SPINT4Q6UDR6 99 aa8.9□□□□□ -0.98
FXN-202ENST00000396364 MT1XP80297 61 aa8.89□□□□□ -0.99
FXN-202ENST00000396364 A8MU10 97 aa8.84□□□□□ -0.99
FXN-202ENST00000396364 KRTAP12-1P59990 96 aa8.82□□□□□ -1
FXN-202ENST00000396364 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.81□□□□□ -1
FXN-202ENST00000396364 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
FXN-202ENST00000396364 KRTAP12-2P59991 146 aa8.75□□□□□ -1.01
FXN-202ENST00000396364 MACF1Q9UPN3 7388 aaKnown RBP8.73□□□□□ -1.01
FXN-202ENST00000396364 A6NED7 52 aa8.72□□□□□ -1.01
FXN-202ENST00000396364 K7ERS5 55 aa8.66□□□□□ -1.02
FXN-202ENST00000396364 KRTAP9-7A8MTY7 169 aa8.57□□□□□ -1.04
FXN-202ENST00000396364 SYNE2Q8WXH0 6885 aaKnown RBP8.49□□□□□ -1.05
FXN-202ENST00000396364 KRTAP10-7P60409 375 aaPredicted RBP8.48□□□□□ -1.05
FXN-202ENST00000396364 KRTAP10-12P60413 245 aa8.47□□□□□ -1.05
FXN-202ENST00000396364 KRTAP6-3Q3LI67 103 aa8.46□□□□□ -1.06
FXN-202ENST00000396364 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
FXN-202ENST00000396364 KRTAP8-1Q8IUC2 63 aa8.38□□□□□ -1.07
FXN-202ENST00000396364 TNP1P09430 55 aa8.36□□□□□ -1.07
FXN-202ENST00000396364 C10orf95Q9H7T3 257 aa8.36□□□□□ -1.07
FXN-202ENST00000396364 KRTAP4-8A0A0G2JLE6 195 aa8.29□□□□□ -1.08
FXN-202ENST00000396364 KRTAP4-8Q9BYQ9 185 aa8.29□□□□□ -1.08
FXN-202ENST00000396364 KRTAP5-9P26371 169 aa8.28□□□□□ -1.08
FXN-202ENST00000396364 KMT2DO14686 5537 aa8.27□□□□□ -1.09
FXN-202ENST00000396364 SPRR2FQ96RM1 72 aa8.2□□□□□ -1.1
FXN-202ENST00000396364 KRTAP25-1Q3LHN0 102 aa8.17□□□□□ -1.1
FXN-202ENST00000396364 BRK1Q8WUW1 75 aa8.12□□□□□ -1.11
FXN-202ENST00000396364 ROMO1P60602 79 aa8.07□□□□□ -1.12
FXN-202ENST00000396364 LCE3AQ5TA76 89 aa8.01□□□□□ -1.13
FXN-202ENST00000396364 MUC12Q9UKN1 5478 aa7.99□□□□□ -1.13
FXN-202ENST00000396364 SPRR2EP22531 72 aa7.95□□□□□ -1.14
FXN-202ENST00000396364 SPRR2BP35325 72 aa7.95□□□□□ -1.14
FXN-202ENST00000396364 SPRR2AP35326 72 aa7.95□□□□□ -1.14
FXN-202ENST00000396364 KRTAP19-7Q3SYF9 63 aa7.92□□□□□ -1.14
FXN-202ENST00000396364 NEBP20929 6669 aa7.91□□□□□ -1.14
FXN-202ENST00000396364 KRTAP23-1A1A580 65 aa7.9□□□□□ -1.14
FXN-202ENST00000396364 KRTAP19-5Q3LI72 72 aa7.9□□□□□ -1.14
FXN-202ENST00000396364 LCE1AQ5T7P2 110 aa7.87□□□□□ -1.15
FXN-202ENST00000396364 MDN1Q9NU22 5596 aa7.86□□□□□ -1.15
FXN-202ENST00000396364 MT1EP04732 61 aa7.85□□□□□ -1.15
FXN-202ENST00000396364 PP632Q6XCG6 107 aa7.78□□□□□ -1.16
FXN-202ENST00000396364 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
FXN-202ENST00000396364 KRTAP19-3Q7Z4W3 81 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms