RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SPATA8Q6RVD6 105 aa8.39□□□□□ -1.07
SMARCD1-202ENST00000394963 LINC01554Q52M75 96 aa8.38□□□□□ -1.07
SMARCD1-202ENST00000394963 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
SMARCD1-202ENST00000394963 ADM2Q7Z4H4 148 aa8.36□□□□□ -1.07
SMARCD1-202ENST00000394963 HSPG2P98160 4391 aa8.35□□□□□ -1.07
SMARCD1-202ENST00000394963 A0A1B0GU33 70 aa8.33□□□□□ -1.08
SMARCD1-202ENST00000394963 S4R3F8 94 aa8.31□□□□□ -1.08
SMARCD1-202ENST00000394963 K7ERS5 55 aa8.29□□□□□ -1.08
SMARCD1-202ENST00000394963 MT1HL1P0DM35 61 aa8.29□□□□□ -1.08
SMARCD1-202ENST00000394963 KRTAP3-1Q9BYR8 98 aa8.25□□□□□ -1.09
SMARCD1-202ENST00000394963 CRIPTQ9P021 101 aa8.24□□□□□ -1.09
SMARCD1-202ENST00000394963 HERC2O95714 4834 aa8.22□□□□□ -1.09
SMARCD1-202ENST00000394963 SPINT4Q6UDR6 99 aa8.22□□□□□ -1.09
SMARCD1-202ENST00000394963 LRP2P98164 4655 aa8.2□□□□□ -1.1
SMARCD1-202ENST00000394963 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
SMARCD1-202ENST00000394963 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
SMARCD1-202ENST00000394963 A6NN06 94 aa8.12□□□□□ -1.11
SMARCD1-202ENST00000394963 H1FX-AS1Q4G0G2 97 aa8.12□□□□□ -1.11
SMARCD1-202ENST00000394963 ABCA13Q86UQ4 5058 aa8.12□□□□□ -1.11
SMARCD1-202ENST00000394963 LPAP08519 4548 aa8.11□□□□□ -1.11
SMARCD1-202ENST00000394963 PKHD1L1Q86WI1 4243 aa8.1□□□□□ -1.11
SMARCD1-202ENST00000394963 TPRXLQ17RH7 258 aa8.07□□□□□ -1.12
SMARCD1-202ENST00000394963 P0C880 135 aa8.03□□□□□ -1.12
SMARCD1-202ENST00000394963 M0R2T5 61 aa8.02□□□□□ -1.12
SMARCD1-202ENST00000394963 H0YAA0 97 aa8.01□□□□□ -1.13
SMARCD1-202ENST00000394963 R4GN34 69 aa7.97□□□□□ -1.13
SMARCD1-202ENST00000394963 HERC1Q15751 4861 aa7.96□□□□□ -1.13
SMARCD1-202ENST00000394963 M0QZ58 72 aa7.96□□□□□ -1.13
SMARCD1-202ENST00000394963 MUC2Q02817 5179 aa7.94□□□□□ -1.14
SMARCD1-202ENST00000394963 TNXBP22105 4242 aa7.91□□□□□ -1.14
SMARCD1-202ENST00000394963 A0A0A0MQY5 61 aa7.88□□□□□ -1.15
SMARCD1-202ENST00000394963 BIRC6Q9NR09 4857 aa7.86□□□□□ -1.15
SMARCD1-202ENST00000394963 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
SMARCD1-202ENST00000394963 KRTAP13-4Q3LI77 160 aa7.8□□□□□ -1.16
SMARCD1-202ENST00000394963 RNF213Q63HN8 5207 aa7.79□□□□□ -1.16
SMARCD1-202ENST00000394963 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
SMARCD1-202ENST00000394963 CAMK2N1Q7Z7J9 78 aa7.75□□□□□ -1.17
SMARCD1-202ENST00000394963 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
SMARCD1-202ENST00000394963 KRTAP4-1Q9BYQ7 146 aa7.73□□□□□ -1.17
SMARCD1-202ENST00000394963 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
SMARCD1-202ENST00000394963 ROMO1P60602 79 aa7.65□□□□□ -1.18
SMARCD1-202ENST00000394963 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
SMARCD1-202ENST00000394963 UBR4Q5T4S7 5183 aa7.63□□□□□ -1.19
SMARCD1-202ENST00000394963 KRTAP12-2P59991 146 aa7.61□□□□□ -1.19
SMARCD1-202ENST00000394963 FAT4Q6V0I7 4981 aa7.59□□□□□ -1.19
SMARCD1-202ENST00000394963 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-202ENST00000394963 NDUFAF8A1L188 74 aa7.47□□□□□ -1.21
SMARCD1-202ENST00000394963 KRTAP25-1Q3LHN0 102 aa7.47□□□□□ -1.21
SMARCD1-202ENST00000394963 KRTAP12-1P59990 96 aa7.45□□□□□ -1.22
SMARCD1-202ENST00000394963 KRTAP10-10P60014 251 aa7.4□□□□□ -1.22
SMARCD1-202ENST00000394963 HMCN2Q8NDA2 5059 aa7.33□□□□□ -1.24
SMARCD1-202ENST00000394963 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
SMARCD1-202ENST00000394963 FSIP2Q5CZC0 6907 aa7.16□□□□□ -1.26
SMARCD1-202ENST00000394963 MUC17Q685J3 4493 aa7.1□□□□□ -1.27
SMARCD1-202ENST00000394963 TNP1P09430 55 aa7.05□□□□□ -1.28
SMARCD1-202ENST00000394963 MT1HP80294 61 aa7.02□□□□□ -1.29
SMARCD1-202ENST00000394963 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
SMARCD1-202ENST00000394963 LUZP6Q538Z0 58 aa6.96□□□□□ -1.3
SMARCD1-202ENST00000394963 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
SMARCD1-202ENST00000394963 LCE2CQ5TA81 110 aa6.93□□□□□ -1.3
SMARCD1-202ENST00000394963 MT1FP04733 61 aa6.89□□□□□ -1.31
SMARCD1-202ENST00000394963 MT2AP02795 61 aa6.86□□□□□ -1.31
SMARCD1-202ENST00000394963 USH2AO75445 5202 aa6.82□□□□□ -1.32
SMARCD1-202ENST00000394963 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
SMARCD1-202ENST00000394963 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
SMARCD1-202ENST00000394963 KRTAP9-8Q9BYQ0 159 aa6.66□□□□□ -1.34
SMARCD1-202ENST00000394963 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.35
SMARCD1-202ENST00000394963 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
SMARCD1-202ENST00000394963 LCE3AQ5TA76 89 aa6.56□□□□□ -1.36
SMARCD1-202ENST00000394963 PRO2289Q9P1D8 64 aa6.56□□□□□ -1.36
SMARCD1-202ENST00000394963 KRTAP10-12P60413 245 aa6.44□□□□□ -1.38
SMARCD1-202ENST00000394963 KMT2DO14686 5537 aa6.43□□□□□ -1.38
SMARCD1-202ENST00000394963 MT1BP07438 61 aa6.41□□□□□ -1.38
SMARCD1-202ENST00000394963 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
SMARCD1-202ENST00000394963 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.39
SMARCD1-202ENST00000394963 MT1XP80297 61 aa6.32□□□□□ -1.4
SMARCD1-202ENST00000394963 LCE2BO14633 110 aa6.32□□□□□ -1.4
SMARCD1-202ENST00000394963 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
SMARCD1-202ENST00000394963 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
SMARCD1-202ENST00000394963 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
SMARCD1-202ENST00000394963 KRTAP4-8A0A0G2JLE6 195 aa6.22□□□□□ -1.41
SMARCD1-202ENST00000394963 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
SMARCD1-202ENST00000394963 LCE2AQ5TA79 106 aaPredicted RBP6.22□□□□□ -1.41
SMARCD1-202ENST00000394963 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
SMARCD1-202ENST00000394963 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
SMARCD1-202ENST00000394963 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
SMARCD1-202ENST00000394963 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
SMARCD1-202ENST00000394963 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
SMARCD1-202ENST00000394963 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
SMARCD1-202ENST00000394963 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
SMARCD1-202ENST00000394963 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
SMARCD1-202ENST00000394963 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
SMARCD1-202ENST00000394963 FCGBPQ9Y6R7 5405 aaPredicted RBP5.8□□□□□ -1.48
SMARCD1-202ENST00000394963 SYNE2Q8WXH0 6885 aaKnown RBP5.79□□□□□ -1.48
SMARCD1-202ENST00000394963 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
SMARCD1-202ENST00000394963 MACF1Q9UPN3 7388 aaKnown RBP5.74□□□□□ -1.49
SMARCD1-202ENST00000394963 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
SMARCD1-202ENST00000394963 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
SMARCD1-202ENST00000394963 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
SMARCD1-202ENST00000394963 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms