RNA–Protein interactions for RNA: ENST00000392919.4

GNPTAB-202, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-202ENST00000392919 FAM236AA0A1B0GUQ0 79 aa12.83□□□□□ -0.36
GNPTAB-202ENST00000392919 FAM236BA0A1B0GV22 79 aa12.83□□□□□ -0.36
GNPTAB-202ENST00000392919 H3BPC8 53 aa12.82□□□□□ -0.36
GNPTAB-202ENST00000392919 LCA10Q71F78 164 aa12.8□□□□□ -0.36
GNPTAB-202ENST00000392919 TRAV7A0A075B6U4 112 aa12.72□□□□□ -0.37
GNPTAB-202ENST00000392919 SMIM20Q8N5G0 67 aa12.72□□□□□ -0.37
GNPTAB-202ENST00000392919 CSAG1Q6PB30 78 aa12.71□□□□□ -0.37
GNPTAB-202ENST00000392919 KRTAP3-3Q9BYR6 98 aa12.71□□□□□ -0.37
GNPTAB-202ENST00000392919 A8MUN3 132 aa12.66□□□□□ -0.38
GNPTAB-202ENST00000392919 KRTAP19-6Q3LI70 58 aa12.62□□□□□ -0.39
GNPTAB-202ENST00000392919 NDUFC1O43677 76 aa12.49□□□□□ -0.41
GNPTAB-202ENST00000392919 DMAC1Q96GE9 116 aa12.49□□□□□ -0.41
GNPTAB-202ENST00000392919 SERP2Q8N6R1 65 aa12.45□□□□□ -0.42
GNPTAB-202ENST00000392919 SNURFQ9Y675 71 aa12.43□□□□□ -0.42
GNPTAB-202ENST00000392919 MACF1Q9UPN3 7388 aaKnown RBP12.4□□□□□ -0.43
GNPTAB-202ENST00000392919 C20orf197Q8N268 126 aa12.36□□□□□ -0.43
GNPTAB-202ENST00000392919 H0YAA0 97 aa12.28□□□□□ -0.44
GNPTAB-202ENST00000392919 SYNE2Q8WXH0 6885 aaKnown RBP12.28□□□□□ -0.44
GNPTAB-202ENST00000392919 ACYP2P14621 99 aa12.25□□□□□ -0.45
GNPTAB-202ENST00000392919 SPRR2GQ9BYE4 73 aa12.21□□□□□ -0.45
GNPTAB-202ENST00000392919 COX7CP15954 63 aa12.2□□□□□ -0.46
GNPTAB-202ENST00000392919 SPANXA2-OT1Q8N9U9 137 aa12.19□□□□□ -0.46
GNPTAB-202ENST00000392919 ADM2Q7Z4H4 148 aa12.17□□□□□ -0.46
GNPTAB-202ENST00000392919 CRIPTQ9P021 101 aa12.13□□□□□ -0.47
GNPTAB-202ENST00000392919 MT1BP07438 61 aa12.11□□□□□ -0.47
GNPTAB-202ENST00000392919 KRTAP19-8Q3LI54 63 aa12.07□□□□□ -0.48
GNPTAB-202ENST00000392919 KRTAP6-3Q3LI67 103 aa12.07□□□□□ -0.48
GNPTAB-202ENST00000392919 Q5VV11 94 aa12.01□□□□□ -0.49
GNPTAB-202ENST00000392919 CHKB-CPT1BH3BT56 60 aa12□□□□□ -0.49
GNPTAB-202ENST00000392919 ANAPC13Q9BS18 74 aa11.99□□□□□ -0.49
GNPTAB-202ENST00000392919 CYSTM1Q9H1C7 97 aa11.99□□□□□ -0.49
GNPTAB-202ENST00000392919 P0C880 135 aa11.98□□□□□ -0.49
GNPTAB-202ENST00000392919 SPTSSBQ8NFR3 76 aa11.98□□□□□ -0.49
GNPTAB-202ENST00000392919 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
GNPTAB-202ENST00000392919 A6NN06 94 aa11.97□□□□□ -0.49
GNPTAB-202ENST00000392919 H7BZZ5 65 aa11.93□□□□□ -0.5
GNPTAB-202ENST00000392919 COA5Q86WW8 74 aa11.83□□□□□ -0.52
GNPTAB-202ENST00000392919 KRTAP10-5P60370 271 aa11.82□□□□□ -0.52
GNPTAB-202ENST00000392919 R4GN34 69 aa11.8□□□□□ -0.52
GNPTAB-202ENST00000392919 CCDC179H3BU77 68 aa11.78□□□□□ -0.52
GNPTAB-202ENST00000392919 M0QZ58 72 aa11.74□□□□□ -0.53
GNPTAB-202ENST00000392919 NEBP20929 6669 aa11.55□□□□□ -0.56
GNPTAB-202ENST00000392919 LINC01554Q52M75 96 aa11.54□□□□□ -0.56
GNPTAB-202ENST00000392919 PLAC4Q8WY50 150 aa11.52□□□□□ -0.57
GNPTAB-202ENST00000392919 MUC12Q9UKN1 5478 aa11.52□□□□□ -0.57
GNPTAB-202ENST00000392919 KRTAP5-9P26371 169 aa11.47□□□□□ -0.57
GNPTAB-202ENST00000392919 ATP5EP56381 51 aaPredicted RBP11.43□□□□□ -0.58
GNPTAB-202ENST00000392919 KRTAP13-4Q3LI77 160 aa11.4□□□□□ -0.58
GNPTAB-202ENST00000392919 SEC61GP60059 68 aa11.39□□□□□ -0.59
GNPTAB-202ENST00000392919 MT1XP80297 61 aa11.38□□□□□ -0.59
GNPTAB-202ENST00000392919 SERP1Q9Y6X1 66 aa11.37□□□□□ -0.59
GNPTAB-202ENST00000392919 TMEM258P61165 79 aa11.32□□□□□ -0.6
GNPTAB-202ENST00000392919 PRO2289Q9P1D8 64 aa11.31□□□□□ -0.6
GNPTAB-202ENST00000392919 KMT2DO14686 5537 aa11.3□□□□□ -0.6
GNPTAB-202ENST00000392919 KRTAP20-1Q3LI63 56 aa11.25□□□□□ -0.61
GNPTAB-202ENST00000392919 A0A1B0GU33 70 aa11.2□□□□□ -0.62
GNPTAB-202ENST00000392919 A0A1B0GU69 56 aa11.18□□□□□ -0.62
GNPTAB-202ENST00000392919 MDN1Q9NU22 5596 aa11.15□□□□□ -0.62
GNPTAB-202ENST00000392919 SPATA8Q6RVD6 105 aa11.13□□□□□ -0.63
GNPTAB-202ENST00000392919 SPRR2FQ96RM1 72 aa11.11□□□□□ -0.63
GNPTAB-202ENST00000392919 A0A0D9SG42 100 aa11.05□□□□□ -0.64
GNPTAB-202ENST00000392919 LINC01558Q9Y6Z2 57 aa11.02□□□□□ -0.65
GNPTAB-202ENST00000392919 KRTAP8-1Q8IUC2 63 aa11.01□□□□□ -0.65
GNPTAB-202ENST00000392919 KRTAP12-2P59991 146 aa11□□□□□ -0.65
GNPTAB-202ENST00000392919 SPRR2EP22531 72 aa10.97□□□□□ -0.65
GNPTAB-202ENST00000392919 SPRR2BP35325 72 aa10.97□□□□□ -0.65
GNPTAB-202ENST00000392919 SPRR2AP35326 72 aa10.97□□□□□ -0.65
GNPTAB-202ENST00000392919 PRR15LQ9BU68 103 aa10.96□□□□□ -0.65
GNPTAB-202ENST00000392919 KRTAP4-8A0A0G2JLE6 195 aa10.92□□□□□ -0.66
GNPTAB-202ENST00000392919 KRTAP4-8Q9BYQ9 185 aa10.92□□□□□ -0.66
GNPTAB-202ENST00000392919 KRTAP2-3P0C7H8 128 aa10.91□□□□□ -0.66
GNPTAB-202ENST00000392919 CAMK2N1Q7Z7J9 78 aa10.91□□□□□ -0.66
GNPTAB-202ENST00000392919 KRTAP2-4Q9BYR9 128 aa10.91□□□□□ -0.66
GNPTAB-202ENST00000392919 KRTAP10-7P60409 375 aaPredicted RBP10.87□□□□□ -0.67
GNPTAB-202ENST00000392919 SMIM26A0A096LP01 95 aa10.86□□□□□ -0.67
GNPTAB-202ENST00000392919 KRTAP12-1P59990 96 aa10.86□□□□□ -0.67
GNPTAB-202ENST00000392919 SPINT4Q6UDR6 99 aa10.86□□□□□ -0.67
GNPTAB-202ENST00000392919 A8MU10 97 aa10.83□□□□□ -0.68
GNPTAB-202ENST00000392919 LCE1AQ5T7P2 110 aa10.83□□□□□ -0.68
GNPTAB-202ENST00000392919 KRTAP10-12P60413 245 aa10.81□□□□□ -0.68
GNPTAB-202ENST00000392919 PCP4P48539 62 aa10.77□□□□□ -0.69
GNPTAB-202ENST00000392919 UQCR11O14957 56 aa10.63□□□□□ -0.71
GNPTAB-202ENST00000392919 SPRR2DP22532 72 aa10.61□□□□□ -0.71
GNPTAB-202ENST00000392919 V9GYY9 64 aa10.6□□□□□ -0.71
GNPTAB-202ENST00000392919 Q1T7F1 81 aa10.59□□□□□ -0.71
GNPTAB-202ENST00000392919 KRTAP2-2Q9BYT5 123 aa10.56□□□□□ -0.72
GNPTAB-202ENST00000392919 KRTAP2-1Q9BYU5 128 aa10.56□□□□□ -0.72
GNPTAB-202ENST00000392919 PSPHP1O15172 72 aa10.51□□□□□ -0.73
GNPTAB-202ENST00000392919 RPS28P62857 69 aaKnown RBP10.44□□□□□ -0.74
GNPTAB-202ENST00000392919 MIR22HGQ0VDD5 57 aa10.44□□□□□ -0.74
GNPTAB-202ENST00000392919 C10orf95Q9H7T3 257 aa10.37□□□□□ -0.75
GNPTAB-202ENST00000392919 LCE3BQ5TA77 95 aa10.34□□□□□ -0.75
GNPTAB-202ENST00000392919 TNP1P09430 55 aa10.19□□□□□ -0.78
GNPTAB-202ENST00000392919 KRTAP19-7Q3SYF9 63 aa10.17□□□□□ -0.78
GNPTAB-202ENST00000392919 A6NED7 52 aa10.16□□□□□ -0.78
GNPTAB-202ENST00000392919 K7ERS5 55 aa10.1□□□□□ -0.79
GNPTAB-202ENST00000392919 MT1EP04732 61 aa10.05□□□□□ -0.8
GNPTAB-202ENST00000392919 KRTAP19-5Q3LI72 72 aa10.02□□□□□ -0.81
GNPTAB-202ENST00000392919 LCE3AQ5TA76 89 aa10.02□□□□□ -0.81
GNPTAB-202ENST00000392919 LCE5AQ5TCM9 118 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms