RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
PDGFB-202ENST00000381551 DMAC1Q96GE9 116 aa7.36□□□□□ -1.23
PDGFB-202ENST00000381551 MT2AP02795 61 aa7.35□□□□□ -1.23
PDGFB-202ENST00000381551 CSAG1Q6PB30 78 aa7.35□□□□□ -1.23
PDGFB-202ENST00000381551 ANAPC13Q9BS18 74 aa7.34□□□□□ -1.23
PDGFB-202ENST00000381551 KRTAP9-7A8MTY7 169 aa7.29□□□□□ -1.24
PDGFB-202ENST00000381551 MT1FP04733 61 aa7.29□□□□□ -1.24
PDGFB-202ENST00000381551 SPANXA2-OT1Q8N9U9 137 aa7.29□□□□□ -1.24
PDGFB-202ENST00000381551 NDUFC1O43677 76 aa7.28□□□□□ -1.24
PDGFB-202ENST00000381551 ACYP2P14621 99 aa7.27□□□□□ -1.25
PDGFB-202ENST00000381551 KRTAP10-10P60014 251 aa7.27□□□□□ -1.25
PDGFB-202ENST00000381551 CYSTM1Q9H1C7 97 aa7.24□□□□□ -1.25
PDGFB-202ENST00000381551 H7BZZ5 65 aa7.21□□□□□ -1.26
PDGFB-202ENST00000381551 CCDC179H3BU77 68 aa7.2□□□□□ -1.26
PDGFB-202ENST00000381551 KRTAP9-3Q9BYQ3 159 aa7.19□□□□□ -1.26
PDGFB-202ENST00000381551 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.18□□□□□ -1.26
PDGFB-202ENST00000381551 H0YAA0 97 aa7.12□□□□□ -1.27
PDGFB-202ENST00000381551 USH2AO75445 5202 aa7.11□□□□□ -1.27
PDGFB-202ENST00000381551 CHKB-CPT1BH3BT56 60 aa7.1□□□□□ -1.27
PDGFB-202ENST00000381551 LCE2BO14633 110 aa7.07□□□□□ -1.28
PDGFB-202ENST00000381551 SPTSSBQ8NFR3 76 aa7.07□□□□□ -1.28
PDGFB-202ENST00000381551 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
PDGFB-202ENST00000381551 COA5Q86WW8 74 aa7.04□□□□□ -1.28
PDGFB-202ENST00000381551 KRTAP19-1Q8IUB9 90 aa7□□□□□ -1.29
PDGFB-202ENST00000381551 CRIPTQ9P021 101 aa7□□□□□ -1.29
PDGFB-202ENST00000381551 KRTAP3-2Q9BYR7 98 aa6.99□□□□□ -1.29
PDGFB-202ENST00000381551 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
PDGFB-202ENST00000381551 SSPOA2VEC9 5147 aa6.97□□□□□ -1.29
PDGFB-202ENST00000381551 P0C880 135 aa6.96□□□□□ -1.3
PDGFB-202ENST00000381551 ATP5EP56381 51 aaPredicted RBP6.95□□□□□ -1.3
PDGFB-202ENST00000381551 TMEM258P61165 79 aa6.93□□□□□ -1.3
PDGFB-202ENST00000381551 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
PDGFB-202ENST00000381551 PCP4P48539 62 aa6.83□□□□□ -1.32
PDGFB-202ENST00000381551 R4GN34 69 aa6.83□□□□□ -1.32
PDGFB-202ENST00000381551 MT1BP07438 61 aa6.81□□□□□ -1.32
PDGFB-202ENST00000381551 Q5VV11 94 aa6.8□□□□□ -1.32
PDGFB-202ENST00000381551 M0QZ58 72 aa6.79□□□□□ -1.32
PDGFB-202ENST00000381551 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
PDGFB-202ENST00000381551 SEC61GP60059 68 aa6.77□□□□□ -1.33
PDGFB-202ENST00000381551 SERP1Q9Y6X1 66 aa6.76□□□□□ -1.33
PDGFB-202ENST00000381551 KRTAP19-6Q3LI70 58 aa6.74□□□□□ -1.33
PDGFB-202ENST00000381551 MACF1Q9UPN3 7388 aaKnown RBP6.71□□□□□ -1.33
PDGFB-202ENST00000381551 SYNE2Q8WXH0 6885 aaKnown RBP6.69□□□□□ -1.34
PDGFB-202ENST00000381551 A0A1B0GU69 56 aa6.68□□□□□ -1.34
PDGFB-202ENST00000381551 LINC01554Q52M75 96 aa6.67□□□□□ -1.34
PDGFB-202ENST00000381551 KRTAP13-4Q3LI77 160 aa6.66□□□□□ -1.34
PDGFB-202ENST00000381551 A0A1B0GU33 70 aa6.64□□□□□ -1.35
PDGFB-202ENST00000381551 LINC01558Q9Y6Z2 57 aa6.64□□□□□ -1.35
PDGFB-202ENST00000381551 PLAC4Q8WY50 150 aa6.62□□□□□ -1.35
PDGFB-202ENST00000381551 PRR15LQ9BU68 103 aa6.58□□□□□ -1.36
PDGFB-202ENST00000381551 KRTAP10-5P60370 271 aa6.56□□□□□ -1.36
PDGFB-202ENST00000381551 SPATA8Q6RVD6 105 aa6.56□□□□□ -1.36
PDGFB-202ENST00000381551 A6NN06 94 aa6.55□□□□□ -1.36
PDGFB-202ENST00000381551 RPS28P62857 69 aaKnown RBP6.53□□□□□ -1.36
PDGFB-202ENST00000381551 KRTAP6-3Q3LI67 103 aa6.52□□□□□ -1.37
PDGFB-202ENST00000381551 SMIM26A0A096LP01 95 aa6.49□□□□□ -1.37
PDGFB-202ENST00000381551 MT1XP80297 61 aa6.48□□□□□ -1.37
PDGFB-202ENST00000381551 Q1T7F1 81 aa6.48□□□□□ -1.37
PDGFB-202ENST00000381551 V9GYY9 64 aa6.48□□□□□ -1.37
PDGFB-202ENST00000381551 A0A0D9SG42 100 aa6.47□□□□□ -1.37
PDGFB-202ENST00000381551 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
PDGFB-202ENST00000381551 A8MU10 97 aa6.4□□□□□ -1.38
PDGFB-202ENST00000381551 UQCR11O14957 56 aa6.39□□□□□ -1.39
PDGFB-202ENST00000381551 PSPHP1O15172 72 aa6.39□□□□□ -1.39
PDGFB-202ENST00000381551 NEBP20929 6669 aa6.39□□□□□ -1.39
PDGFB-202ENST00000381551 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
PDGFB-202ENST00000381551 SPINT4Q6UDR6 99 aa6.37□□□□□ -1.39
PDGFB-202ENST00000381551 KRTAP20-1Q3LI63 56 aa6.35□□□□□ -1.39
PDGFB-202ENST00000381551 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
PDGFB-202ENST00000381551 CAMK2N1Q7Z7J9 78 aa6.34□□□□□ -1.39
PDGFB-202ENST00000381551 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
PDGFB-202ENST00000381551 KMT2DO14686 5537 aa6.21□□□□□ -1.42
PDGFB-202ENST00000381551 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
PDGFB-202ENST00000381551 MUC12Q9UKN1 5478 aa6.19□□□□□ -1.42
PDGFB-202ENST00000381551 A6NED7 52 aa6.18□□□□□ -1.42
PDGFB-202ENST00000381551 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
PDGFB-202ENST00000381551 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
PDGFB-202ENST00000381551 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
PDGFB-202ENST00000381551 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
PDGFB-202ENST00000381551 K7ERS5 55 aa6.06□□□□□ -1.44
PDGFB-202ENST00000381551 KRTAP5-9P26371 169 aa6.03□□□□□ -1.44
PDGFB-202ENST00000381551 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
PDGFB-202ENST00000381551 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
PDGFB-202ENST00000381551 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
PDGFB-202ENST00000381551 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
PDGFB-202ENST00000381551 TNP1P09430 55 aa5.96□□□□□ -1.46
PDGFB-202ENST00000381551 MDN1Q9NU22 5596 aa5.96□□□□□ -1.46
PDGFB-202ENST00000381551 SPRR2FQ96RM1 72 aa5.93□□□□□ -1.46
PDGFB-202ENST00000381551 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
PDGFB-202ENST00000381551 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
PDGFB-202ENST00000381551 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
PDGFB-202ENST00000381551 KRTAP2-2Q9BYT5 123 aa5.79□□□□□ -1.48
PDGFB-202ENST00000381551 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
PDGFB-202ENST00000381551 ROMO1P60602 79 aa5.76□□□□□ -1.49
PDGFB-202ENST00000381551 BRK1Q8WUW1 75 aa5.75□□□□□ -1.49
PDGFB-202ENST00000381551 SPRR2EP22531 72 aa5.74□□□□□ -1.49
PDGFB-202ENST00000381551 SPRR2BP35325 72 aa5.74□□□□□ -1.49
PDGFB-202ENST00000381551 SPRR2AP35326 72 aa5.74□□□□□ -1.49
PDGFB-202ENST00000381551 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
PDGFB-202ENST00000381551 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms