RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 A6NED7 52 aa8.79□□□□□ -1
RPAIN-203ENST00000381209 LRP2P98164 4655 aa8.74□□□□□ -1.01
RPAIN-203ENST00000381209 SEC61GP60059 68 aa8.74□□□□□ -1.01
RPAIN-203ENST00000381209 H3BS24 57 aa8.72□□□□□ -1.01
RPAIN-203ENST00000381209 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
RPAIN-203ENST00000381209 LPAP08519 4548 aa8.72□□□□□ -1.01
RPAIN-203ENST00000381209 H1FX-AS1Q4G0G2 97 aa8.71□□□□□ -1.01
RPAIN-203ENST00000381209 CDC42SE1Q9NRR8 79 aa8.7□□□□□ -1.02
RPAIN-203ENST00000381209 S4R3F8 94 aa8.7□□□□□ -1.02
RPAIN-203ENST00000381209 LCA10Q71F78 164 aa8.68□□□□□ -1.02
RPAIN-203ENST00000381209 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
RPAIN-203ENST00000381209 UQCR11O14957 56 aa8.63□□□□□ -1.03
RPAIN-203ENST00000381209 A8MU10 97 aa8.61□□□□□ -1.03
RPAIN-203ENST00000381209 SPATA8Q6RVD6 105 aa8.58□□□□□ -1.04
RPAIN-203ENST00000381209 MUC17Q685J3 4493 aa8.56□□□□□ -1.04
RPAIN-203ENST00000381209 KRTAP4-1Q9BYQ7 146 aa8.55□□□□□ -1.04
RPAIN-203ENST00000381209 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
RPAIN-203ENST00000381209 HERC1Q15751 4861 aa8.52□□□□□ -1.04
RPAIN-203ENST00000381209 A0A1B0GU33 70 aa8.51□□□□□ -1.05
RPAIN-203ENST00000381209 A0A0A0MQY5 61 aa8.49□□□□□ -1.05
RPAIN-203ENST00000381209 CSAG1Q6PB30 78 aa8.48□□□□□ -1.05
RPAIN-203ENST00000381209 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
RPAIN-203ENST00000381209 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
RPAIN-203ENST00000381209 HMCN2Q8NDA2 5059 aa8.4□□□□□ -1.06
RPAIN-203ENST00000381209 H0YAA0 97 aa8.39□□□□□ -1.07
RPAIN-203ENST00000381209 PMAIP1Q13794 54 aa8.39□□□□□ -1.07
RPAIN-203ENST00000381209 KRTAP19-2Q3LHN2 52 aa8.39□□□□□ -1.07
RPAIN-203ENST00000381209 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.08
RPAIN-203ENST00000381209 A6NN06 94 aa8.33□□□□□ -1.08
RPAIN-203ENST00000381209 P0C880 135 aa8.32□□□□□ -1.08
RPAIN-203ENST00000381209 KRTAP13-4Q3LI77 160 aa8.23□□□□□ -1.09
RPAIN-203ENST00000381209 M0QZ58 72 aa8.17□□□□□ -1.1
RPAIN-203ENST00000381209 K7ERS5 55 aa8.13□□□□□ -1.11
RPAIN-203ENST00000381209 KTN1-AS1Q86SY8 53 aa8.13□□□□□ -1.11
RPAIN-203ENST00000381209 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
RPAIN-203ENST00000381209 A0A0D9SG42 100 aa8.08□□□□□ -1.12
RPAIN-203ENST00000381209 MUC2Q02817 5179 aa8.08□□□□□ -1.12
RPAIN-203ENST00000381209 FLGP20930 4061 aaPredicted RBP8.07□□□□□ -1.12
RPAIN-203ENST00000381209 R4GN34 69 aa8.02□□□□□ -1.13
RPAIN-203ENST00000381209 UBR4Q5T4S7 5183 aa8.01□□□□□ -1.13
RPAIN-203ENST00000381209 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-203ENST00000381209 KRTAP12-1P59990 96 aa7.94□□□□□ -1.14
RPAIN-203ENST00000381209 RNF213Q63HN8 5207 aa7.94□□□□□ -1.14
RPAIN-203ENST00000381209 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
RPAIN-203ENST00000381209 MT1HP80294 61 aa7.91□□□□□ -1.14
RPAIN-203ENST00000381209 CRIPTQ9P021 101 aa7.9□□□□□ -1.14
RPAIN-203ENST00000381209 SPINT4Q6UDR6 99 aa7.89□□□□□ -1.15
RPAIN-203ENST00000381209 LINC01554Q52M75 96 aa7.86□□□□□ -1.15
RPAIN-203ENST00000381209 M0R2T5 61 aa7.84□□□□□ -1.15
RPAIN-203ENST00000381209 ROMO1P60602 79 aa7.83□□□□□ -1.16
RPAIN-203ENST00000381209 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
RPAIN-203ENST00000381209 LOC100996750A0A140TA64 210 aa7.79□□□□□ -1.16
RPAIN-203ENST00000381209 KRTAP4-6Q9BYQ5 205 aa7.79□□□□□ -1.16
RPAIN-203ENST00000381209 FAT4Q6V0I7 4981 aa7.75□□□□□ -1.17
RPAIN-203ENST00000381209 MT2AP02795 61 aa7.66□□□□□ -1.18
RPAIN-203ENST00000381209 SPRR2GQ9BYE4 73 aa7.66□□□□□ -1.18
RPAIN-203ENST00000381209 KRTAP9-8Q9BYQ0 159 aa7.66□□□□□ -1.18
RPAIN-203ENST00000381209 KRTAP25-1Q3LHN0 102 aa7.62□□□□□ -1.19
RPAIN-203ENST00000381209 MT1FP04733 61 aa7.62□□□□□ -1.19
RPAIN-203ENST00000381209 KRTAP10-10P60014 251 aa7.6□□□□□ -1.19
RPAIN-203ENST00000381209 KRTAP19-1Q8IUB9 90 aa7.59□□□□□ -1.19
RPAIN-203ENST00000381209 CAMK2N1Q7Z7J9 78 aa7.54□□□□□ -1.2
RPAIN-203ENST00000381209 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
RPAIN-203ENST00000381209 C10orf95Q9H7T3 257 aa7.5□□□□□ -1.21
RPAIN-203ENST00000381209 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
RPAIN-203ENST00000381209 KRTAP19-8Q3LI54 63 aa7.42□□□□□ -1.22
RPAIN-203ENST00000381209 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
RPAIN-203ENST00000381209 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
RPAIN-203ENST00000381209 MT1BP07438 61 aa7.27□□□□□ -1.25
RPAIN-203ENST00000381209 TNP1P09430 55 aa7.24□□□□□ -1.25
RPAIN-203ENST00000381209 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
RPAIN-203ENST00000381209 LCE2BO14633 110 aa7.11□□□□□ -1.27
RPAIN-203ENST00000381209 KRTAP10-5P60370 271 aa7.09□□□□□ -1.27
RPAIN-203ENST00000381209 MT1XP80297 61 aa7.09□□□□□ -1.27
RPAIN-203ENST00000381209 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
RPAIN-203ENST00000381209 PRO2289Q9P1D8 64 aa7.01□□□□□ -1.29
RPAIN-203ENST00000381209 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
RPAIN-203ENST00000381209 KRTAP10-7P60409 375 aaPredicted RBP6.81□□□□□ -1.32
RPAIN-203ENST00000381209 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
RPAIN-203ENST00000381209 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
RPAIN-203ENST00000381209 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
RPAIN-203ENST00000381209 USH2AO75445 5202 aa6.78□□□□□ -1.32
RPAIN-203ENST00000381209 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
RPAIN-203ENST00000381209 KRTAP9-6A0A140TA67 174 aa6.75□□□□□ -1.33
RPAIN-203ENST00000381209 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
RPAIN-203ENST00000381209 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.33
RPAIN-203ENST00000381209 KRTAP19-6Q3LI70 58 aa6.65□□□□□ -1.35
RPAIN-203ENST00000381209 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
RPAIN-203ENST00000381209 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
RPAIN-203ENST00000381209 SSPOA2VEC9 5147 aa6.52□□□□□ -1.37
RPAIN-203ENST00000381209 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
RPAIN-203ENST00000381209 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.37
RPAIN-203ENST00000381209 KRTAP19-5Q3LI72 72 aa6.46□□□□□ -1.37
RPAIN-203ENST00000381209 LUZP6Q538Z0 58 aa6.42□□□□□ -1.38
RPAIN-203ENST00000381209 LCE3BQ5TA77 95 aa6.42□□□□□ -1.38
RPAIN-203ENST00000381209 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
RPAIN-203ENST00000381209 KRTAP9-9Q9BYP9 154 aa6.35□□□□□ -1.39
RPAIN-203ENST00000381209 KRTAP9-4Q9BYQ2 154 aa6.35□□□□□ -1.39
RPAIN-203ENST00000381209 KRTAP19-7Q3SYF9 63 aa6.33□□□□□ -1.4
RPAIN-203ENST00000381209 KMT2DO14686 5537 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms