RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 KRTAP20-1Q3LI63 56 aa7.3□□□□□ -1.24
VCX3A-201ENST00000381089 MP68P56378 58 aa7.29□□□□□ -1.24
VCX3A-201ENST00000381089 C4orf26Q17RF5 130 aa7.29□□□□□ -1.24
VCX3A-201ENST00000381089 Q5VV11 94 aa7.29□□□□□ -1.24
VCX3A-201ENST00000381089 C1orf64Q8NEQ6 169 aa7.29□□□□□ -1.24
VCX3A-201ENST00000381089 LINC00208Q96KT6 92 aa7.29□□□□□ -1.24
VCX3A-201ENST00000381089 CYP4F30PQ9H0H9 118 aa7.29□□□□□ -1.24
VCX3A-201ENST00000381089 C5orf47Q569G3 176 aa7.26□□□□□ -1.25
VCX3A-201ENST00000381089 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
VCX3A-201ENST00000381089 TRAV7A0A075B6U4 112 aa7.24□□□□□ -1.25
VCX3A-201ENST00000381089 MT1BP07438 61 aa7.22□□□□□ -1.25
VCX3A-201ENST00000381089 H3BPC8 53 aa7.19□□□□□ -1.26
VCX3A-201ENST00000381089 KLKP1Q107X0 134 aa7.18□□□□□ -1.26
VCX3A-201ENST00000381089 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
VCX3A-201ENST00000381089 SPRR2GQ9BYE4 73 aa7.18□□□□□ -1.26
VCX3A-201ENST00000381089 S4R3F8 94 aa7.18□□□□□ -1.26
VCX3A-201ENST00000381089 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
VCX3A-201ENST00000381089 CSAG1Q6PB30 78 aa7.17□□□□□ -1.26
VCX3A-201ENST00000381089 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
VCX3A-201ENST00000381089 SERP2Q8N6R1 65 aa7.15□□□□□ -1.26
VCX3A-201ENST00000381089 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
VCX3A-201ENST00000381089 SNURFQ9Y675 71 aa7.12□□□□□ -1.27
VCX3A-201ENST00000381089 MDN1Q9NU22 5596 aa7.12□□□□□ -1.27
VCX3A-201ENST00000381089 KMT2DO14686 5537 aa7.11□□□□□ -1.27
VCX3A-201ENST00000381089 C20orf197Q8N268 126 aa7.1□□□□□ -1.27
VCX3A-201ENST00000381089 LCA10Q71F78 164 aa7.08□□□□□ -1.28
VCX3A-201ENST00000381089 COX7CP15954 63 aa7.04□□□□□ -1.28
VCX3A-201ENST00000381089 ANAPC13Q9BS18 74 aa7.04□□□□□ -1.28
VCX3A-201ENST00000381089 KRTAP2-3P0C7H8 128 aa7.01□□□□□ -1.29
VCX3A-201ENST00000381089 KRTAP2-4Q9BYR9 128 aa7.01□□□□□ -1.29
VCX3A-201ENST00000381089 A8MUN3 132 aa7□□□□□ -1.29
VCX3A-201ENST00000381089 CRIPTQ9P021 101 aa7□□□□□ -1.29
VCX3A-201ENST00000381089 DMAC1Q96GE9 116 aa6.97□□□□□ -1.29
VCX3A-201ENST00000381089 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
VCX3A-201ENST00000381089 CYSTM1Q9H1C7 97 aa6.91□□□□□ -1.3
VCX3A-201ENST00000381089 CCDC179H3BU77 68 aa6.9□□□□□ -1.3
VCX3A-201ENST00000381089 NDUFC1O43677 76 aa6.89□□□□□ -1.31
VCX3A-201ENST00000381089 SPRR2FQ96RM1 72 aa6.89□□□□□ -1.31
VCX3A-201ENST00000381089 SPRR2EP22531 72 aa6.88□□□□□ -1.31
VCX3A-201ENST00000381089 SPRR2BP35325 72 aa6.88□□□□□ -1.31
VCX3A-201ENST00000381089 SPRR2AP35326 72 aa6.88□□□□□ -1.31
VCX3A-201ENST00000381089 SPANXA2-OT1Q8N9U9 137 aa6.88□□□□□ -1.31
VCX3A-201ENST00000381089 ACYP2P14621 99 aa6.86□□□□□ -1.31
VCX3A-201ENST00000381089 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
VCX3A-201ENST00000381089 H7BZZ5 65 aa6.84□□□□□ -1.31
VCX3A-201ENST00000381089 CHKB-CPT1BH3BT56 60 aa6.8□□□□□ -1.32
VCX3A-201ENST00000381089 H0YAA0 97 aa6.77□□□□□ -1.33
VCX3A-201ENST00000381089 KRTAP2-2Q9BYT5 123 aa6.77□□□□□ -1.33
VCX3A-201ENST00000381089 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
VCX3A-201ENST00000381089 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
VCX3A-201ENST00000381089 COA5Q86WW8 74 aa6.73□□□□□ -1.33
VCX3A-201ENST00000381089 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
VCX3A-201ENST00000381089 MT1XP80297 61 aa6.7□□□□□ -1.34
VCX3A-201ENST00000381089 SPTSSBQ8NFR3 76 aa6.7□□□□□ -1.34
VCX3A-201ENST00000381089 LCE1AQ5T7P2 110 aa6.69□□□□□ -1.34
VCX3A-201ENST00000381089 ADM2Q7Z4H4 148 aa6.69□□□□□ -1.34
VCX3A-201ENST00000381089 SPRR2DP22532 72 aa6.66□□□□□ -1.34
VCX3A-201ENST00000381089 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
VCX3A-201ENST00000381089 ATP5EP56381 51 aaPredicted RBP6.62□□□□□ -1.35
VCX3A-201ENST00000381089 TMEM258P61165 79 aa6.61□□□□□ -1.35
VCX3A-201ENST00000381089 P0C880 135 aa6.59□□□□□ -1.35
VCX3A-201ENST00000381089 R4GN34 69 aa6.58□□□□□ -1.36
VCX3A-201ENST00000381089 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
VCX3A-201ENST00000381089 PCP4P48539 62 aa6.56□□□□□ -1.36
VCX3A-201ENST00000381089 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
VCX3A-201ENST00000381089 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
VCX3A-201ENST00000381089 LCE3BQ5TA77 95 aa6.5□□□□□ -1.37
VCX3A-201ENST00000381089 M0QZ58 72 aa6.49□□□□□ -1.37
VCX3A-201ENST00000381089 SEC61GP60059 68 aa6.43□□□□□ -1.38
VCX3A-201ENST00000381089 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
VCX3A-201ENST00000381089 SERP1Q9Y6X1 66 aa6.41□□□□□ -1.38
VCX3A-201ENST00000381089 KRTAP10-7P60409 375 aaPredicted RBP6.38□□□□□ -1.39
VCX3A-201ENST00000381089 KRTAP10-12P60413 245 aa6.37□□□□□ -1.39
VCX3A-201ENST00000381089 A0A1B0GU69 56 aa6.36□□□□□ -1.39
VCX3A-201ENST00000381089 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
VCX3A-201ENST00000381089 GPR98Q8WXG9 6306 aa6.31□□□□□ -1.4
VCX3A-201ENST00000381089 A0A1B0GU33 70 aa6.29□□□□□ -1.4
VCX3A-201ENST00000381089 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
VCX3A-201ENST00000381089 PRR15LQ9BU68 103 aa6.27□□□□□ -1.41
VCX3A-201ENST00000381089 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
VCX3A-201ENST00000381089 A0A0D9SG42 100 aa6.22□□□□□ -1.41
VCX3A-201ENST00000381089 DSTQ03001 7570 aaKnown RBP6.2□□□□□ -1.42
VCX3A-201ENST00000381089 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
VCX3A-201ENST00000381089 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
VCX3A-201ENST00000381089 V9GYY9 64 aa6.15□□□□□ -1.42
VCX3A-201ENST00000381089 PSPHP1O15172 72 aa6.13□□□□□ -1.43
VCX3A-201ENST00000381089 Q1T7F1 81 aa6.13□□□□□ -1.43
VCX3A-201ENST00000381089 A8MU10 97 aa6.11□□□□□ -1.43
VCX3A-201ENST00000381089 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
VCX3A-201ENST00000381089 SPINT4Q6UDR6 99 aa6.08□□□□□ -1.44
VCX3A-201ENST00000381089 UQCR11O14957 56 aa6.06□□□□□ -1.44
VCX3A-201ENST00000381089 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
VCX3A-201ENST00000381089 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
VCX3A-201ENST00000381089 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
VCX3A-201ENST00000381089 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
VCX3A-201ENST00000381089 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
VCX3A-201ENST00000381089 KRTAP19-7Q3SYF9 63 aa5.98□□□□□ -1.45
VCX3A-201ENST00000381089 MT1EP04732 61 aa5.97□□□□□ -1.45
VCX3A-201ENST00000381089 A6NED7 52 aa5.94□□□□□ -1.46
VCX3A-201ENST00000381089 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms