RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 RBM12B-AS1Q9P1G2 102 aa7.73□□□□□ -1.17
RAB3IP-204ENST00000378815 H1FX-AS1Q4G0G2 97 aa7.73□□□□□ -1.17
RAB3IP-204ENST00000378815 LCA10Q71F78 164 aa7.72□□□□□ -1.17
RAB3IP-204ENST00000378815 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
RAB3IP-204ENST00000378815 A6NED7 52 aa7.7□□□□□ -1.18
RAB3IP-204ENST00000378815 KRTAP4-1Q9BYQ7 146 aa7.7□□□□□ -1.18
RAB3IP-204ENST00000378815 S4R3F8 94 aa7.7□□□□□ -1.18
RAB3IP-204ENST00000378815 HERC1Q15751 4861 aa7.69□□□□□ -1.18
RAB3IP-204ENST00000378815 MUC17Q685J3 4493 aa7.67□□□□□ -1.18
RAB3IP-204ENST00000378815 PRO0628Q9UI54 55 aa7.67□□□□□ -1.18
RAB3IP-204ENST00000378815 SEC61GP60059 68 aa7.66□□□□□ -1.18
RAB3IP-204ENST00000378815 HMCN2Q8NDA2 5059 aa7.64□□□□□ -1.19
RAB3IP-204ENST00000378815 A8MU10 97 aa7.62□□□□□ -1.19
RAB3IP-204ENST00000378815 CDC42SE1Q9NRR8 79 aa7.6□□□□□ -1.19
RAB3IP-204ENST00000378815 UQCR11O14957 56 aa7.57□□□□□ -1.2
RAB3IP-204ENST00000378815 KRTAP19-2Q3LHN2 52 aa7.54□□□□□ -1.2
RAB3IP-204ENST00000378815 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.21
RAB3IP-204ENST00000378815 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
RAB3IP-204ENST00000378815 MIR22HGQ0VDD5 57 aa7.5□□□□□ -1.21
RAB3IP-204ENST00000378815 A0A1B0GU33 70 aa7.49□□□□□ -1.21
RAB3IP-204ENST00000378815 KRTAP10-6P60371 365 aaPredicted RBP7.49□□□□□ -1.21
RAB3IP-204ENST00000378815 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
RAB3IP-204ENST00000378815 MUC2Q02817 5179 aa7.45□□□□□ -1.22
RAB3IP-204ENST00000378815 H0YAA0 97 aa7.42□□□□□ -1.22
RAB3IP-204ENST00000378815 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.23
RAB3IP-204ENST00000378815 P0C880 135 aa7.39□□□□□ -1.23
RAB3IP-204ENST00000378815 PMAIP1Q13794 54 aa7.33□□□□□ -1.24
RAB3IP-204ENST00000378815 KRTAP13-4Q3LI77 160 aa7.31□□□□□ -1.24
RAB3IP-204ENST00000378815 FLGP20930 4061 aaPredicted RBP7.31□□□□□ -1.24
RAB3IP-204ENST00000378815 UBR4Q5T4S7 5183 aa7.3□□□□□ -1.24
RAB3IP-204ENST00000378815 A6NN06 94 aa7.28□□□□□ -1.24
RAB3IP-204ENST00000378815 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
RAB3IP-204ENST00000378815 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
RAB3IP-204ENST00000378815 M0QZ58 72 aa7.2□□□□□ -1.26
RAB3IP-204ENST00000378815 A0A0D9SG42 100 aa7.17□□□□□ -1.26
RAB3IP-204ENST00000378815 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
RAB3IP-204ENST00000378815 FAT4Q6V0I7 4981 aa7.12□□□□□ -1.27
RAB3IP-204ENST00000378815 MT1HP80294 61 aa7.11□□□□□ -1.27
RAB3IP-204ENST00000378815 R4GN34 69 aa7.11□□□□□ -1.27
RAB3IP-204ENST00000378815 K7ERS5 55 aa7.1□□□□□ -1.27
RAB3IP-204ENST00000378815 KTN1-AS1Q86SY8 53 aa7.08□□□□□ -1.28
RAB3IP-204ENST00000378815 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
RAB3IP-204ENST00000378815 M0R2T5 61 aa7.03□□□□□ -1.28
RAB3IP-204ENST00000378815 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
RAB3IP-204ENST00000378815 LINC01554Q52M75 96 aa7□□□□□ -1.29
RAB3IP-204ENST00000378815 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
RAB3IP-204ENST00000378815 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
RAB3IP-204ENST00000378815 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
RAB3IP-204ENST00000378815 MT2AP02795 61 aa6.87□□□□□ -1.31
RAB3IP-204ENST00000378815 ROMO1P60602 79 aa6.87□□□□□ -1.31
RAB3IP-204ENST00000378815 PRAC1Q96KF2 57 aa6.87□□□□□ -1.31
RAB3IP-204ENST00000378815 MT1FP04733 61 aa6.84□□□□□ -1.31
RAB3IP-204ENST00000378815 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
RAB3IP-204ENST00000378815 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
RAB3IP-204ENST00000378815 KRTAP19-1Q8IUB9 90 aa6.8□□□□□ -1.32
RAB3IP-204ENST00000378815 H3BS24 57 aa6.73□□□□□ -1.33
RAB3IP-204ENST00000378815 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
RAB3IP-204ENST00000378815 CAMK2N1Q7Z7J9 78 aa6.67□□□□□ -1.34
RAB3IP-204ENST00000378815 A0A0A0MQY5 61 aa6.67□□□□□ -1.34
RAB3IP-204ENST00000378815 KRTAP25-1Q3LHN0 102 aa6.66□□□□□ -1.34
RAB3IP-204ENST00000378815 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
RAB3IP-204ENST00000378815 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
RAB3IP-204ENST00000378815 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
RAB3IP-204ENST00000378815 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
RAB3IP-204ENST00000378815 MT1BP07438 61 aa6.52□□□□□ -1.37
RAB3IP-204ENST00000378815 LCE2BO14633 110 aa6.41□□□□□ -1.38
RAB3IP-204ENST00000378815 TNP1P09430 55 aa6.38□□□□□ -1.39
RAB3IP-204ENST00000378815 MT1XP80297 61 aa6.35□□□□□ -1.39
RAB3IP-204ENST00000378815 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
RAB3IP-204ENST00000378815 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
RAB3IP-204ENST00000378815 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
RAB3IP-204ENST00000378815 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
RAB3IP-204ENST00000378815 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
RAB3IP-204ENST00000378815 USH2AO75445 5202 aa6.19□□□□□ -1.42
RAB3IP-204ENST00000378815 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
RAB3IP-204ENST00000378815 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
RAB3IP-204ENST00000378815 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
RAB3IP-204ENST00000378815 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
RAB3IP-204ENST00000378815 SSPOA2VEC9 5147 aa5.96□□□□□ -1.45
RAB3IP-204ENST00000378815 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.45
RAB3IP-204ENST00000378815 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
RAB3IP-204ENST00000378815 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
RAB3IP-204ENST00000378815 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
RAB3IP-204ENST00000378815 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
RAB3IP-204ENST00000378815 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
RAB3IP-204ENST00000378815 KMT2DO14686 5537 aa5.79□□□□□ -1.48
RAB3IP-204ENST00000378815 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
RAB3IP-204ENST00000378815 FCGBPQ9Y6R7 5405 aaPredicted RBP5.69□□□□□ -1.5
RAB3IP-204ENST00000378815 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
RAB3IP-204ENST00000378815 KRTAP9-2Q9BYQ4 174 aa5.68□□□□□ -1.5
RAB3IP-204ENST00000378815 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
RAB3IP-204ENST00000378815 NDUFAF8A1L188 74 aa5.55□□□□□ -1.52
RAB3IP-204ENST00000378815 MT1EP04732 61 aa5.55□□□□□ -1.52
RAB3IP-204ENST00000378815 LUZP6Q538Z0 58 aa5.52□□□□□ -1.53
RAB3IP-204ENST00000378815 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
RAB3IP-204ENST00000378815 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
RAB3IP-204ENST00000378815 MT1LQ93083 61 aa5.46□□□□□ -1.54
RAB3IP-204ENST00000378815 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
RAB3IP-204ENST00000378815 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
RAB3IP-204ENST00000378815 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms