RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 S4R3F8 94 aa7.36□□□□□ -1.23
POLR1E-202ENST00000377798 UBR4Q5T4S7 5183 aa7.36□□□□□ -1.23
POLR1E-202ENST00000377798 LCA10Q71F78 164 aa7.35□□□□□ -1.23
POLR1E-202ENST00000377798 SVIPQ8NHG7 77 aa7.34□□□□□ -1.23
POLR1E-202ENST00000377798 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
POLR1E-202ENST00000377798 KRTAP19-2Q3LHN2 52 aa7.32□□□□□ -1.24
POLR1E-202ENST00000377798 KRTAP3-3Q9BYR6 98 aa7.32□□□□□ -1.24
POLR1E-202ENST00000377798 RNF213Q63HN8 5207 aa7.31□□□□□ -1.24
POLR1E-202ENST00000377798 PSPHP1O15172 72 aa7.26□□□□□ -1.25
POLR1E-202ENST00000377798 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
POLR1E-202ENST00000377798 FLGP20930 4061 aaPredicted RBP7.23□□□□□ -1.25
POLR1E-202ENST00000377798 A0A1B0GU69 56 aa7.22□□□□□ -1.25
POLR1E-202ENST00000377798 Q5VV11 94 aa7.21□□□□□ -1.26
POLR1E-202ENST00000377798 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
POLR1E-202ENST00000377798 SEC61GP60059 68 aa7.17□□□□□ -1.26
POLR1E-202ENST00000377798 FAT4Q6V0I7 4981 aa7.16□□□□□ -1.26
POLR1E-202ENST00000377798 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
POLR1E-202ENST00000377798 KRTAP3-2Q9BYR7 98 aa7.05□□□□□ -1.28
POLR1E-202ENST00000377798 A6NED7 52 aa7.04□□□□□ -1.28
POLR1E-202ENST00000377798 H0YAA0 97 aa7.04□□□□□ -1.28
POLR1E-202ENST00000377798 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
POLR1E-202ENST00000377798 ADM2Q7Z4H4 148 aa7.03□□□□□ -1.28
POLR1E-202ENST00000377798 UQCR11O14957 56 aa7□□□□□ -1.29
POLR1E-202ENST00000377798 MT1HP80294 61 aa7□□□□□ -1.29
POLR1E-202ENST00000377798 A0A1B0GU33 70 aa7□□□□□ -1.29
POLR1E-202ENST00000377798 P0C880 135 aa7□□□□□ -1.29
POLR1E-202ENST00000377798 BRK1Q8WUW1 75 aa6.97□□□□□ -1.29
POLR1E-202ENST00000377798 M0R2T5 61 aa6.94□□□□□ -1.3
POLR1E-202ENST00000377798 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
POLR1E-202ENST00000377798 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
POLR1E-202ENST00000377798 SPATA8Q6RVD6 105 aa6.9□□□□□ -1.3
POLR1E-202ENST00000377798 A8MU10 97 aa6.89□□□□□ -1.31
POLR1E-202ENST00000377798 KRTAP13-4Q3LI77 160 aa6.85□□□□□ -1.31
POLR1E-202ENST00000377798 M0QZ58 72 aa6.82□□□□□ -1.32
POLR1E-202ENST00000377798 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
POLR1E-202ENST00000377798 PRO0628Q9UI54 55 aa6.81□□□□□ -1.32
POLR1E-202ENST00000377798 R4GN34 69 aa6.79□□□□□ -1.32
POLR1E-202ENST00000377798 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
POLR1E-202ENST00000377798 CRIPTQ9P021 101 aa6.74□□□□□ -1.33
POLR1E-202ENST00000377798 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
POLR1E-202ENST00000377798 A0A0D9SG42 100 aa6.73□□□□□ -1.33
POLR1E-202ENST00000377798 MT2AP02795 61 aa6.73□□□□□ -1.33
POLR1E-202ENST00000377798 MT1FP04733 61 aa6.69□□□□□ -1.34
POLR1E-202ENST00000377798 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
POLR1E-202ENST00000377798 LINC01554Q52M75 96 aa6.66□□□□□ -1.34
POLR1E-202ENST00000377798 K7ERS5 55 aa6.61□□□□□ -1.35
POLR1E-202ENST00000377798 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
POLR1E-202ENST00000377798 KRTAP12-1P59990 96 aa6.6□□□□□ -1.35
POLR1E-202ENST00000377798 PMAIP1Q13794 54 aa6.58□□□□□ -1.36
POLR1E-202ENST00000377798 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
POLR1E-202ENST00000377798 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
POLR1E-202ENST00000377798 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
POLR1E-202ENST00000377798 A6NN06 94 aa6.55□□□□□ -1.36
POLR1E-202ENST00000377798 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
POLR1E-202ENST00000377798 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
POLR1E-202ENST00000377798 KRTAP19-8Q3LI54 63 aa6.42□□□□□ -1.38
POLR1E-202ENST00000377798 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
POLR1E-202ENST00000377798 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
POLR1E-202ENST00000377798 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
POLR1E-202ENST00000377798 MT1BP07438 61 aa6.34□□□□□ -1.39
POLR1E-202ENST00000377798 ROMO1P60602 79 aa6.34□□□□□ -1.39
POLR1E-202ENST00000377798 LCE2BO14633 110 aa6.32□□□□□ -1.4
POLR1E-202ENST00000377798 KTN1-AS1Q86SY8 53 aa6.32□□□□□ -1.4
POLR1E-202ENST00000377798 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
POLR1E-202ENST00000377798 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
POLR1E-202ENST00000377798 USH2AO75445 5202 aa6.2□□□□□ -1.42
POLR1E-202ENST00000377798 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
POLR1E-202ENST00000377798 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
POLR1E-202ENST00000377798 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
POLR1E-202ENST00000377798 MT1XP80297 61 aa6.13□□□□□ -1.43
POLR1E-202ENST00000377798 KRTAP10-5P60370 271 aa6.12□□□□□ -1.43
POLR1E-202ENST00000377798 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
POLR1E-202ENST00000377798 PRO2289Q9P1D8 64 aa6.07□□□□□ -1.44
POLR1E-202ENST00000377798 TNP1P09430 55 aa6.05□□□□□ -1.44
POLR1E-202ENST00000377798 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
POLR1E-202ENST00000377798 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
POLR1E-202ENST00000377798 KRTAP10-7P60409 375 aaPredicted RBP5.88□□□□□ -1.47
POLR1E-202ENST00000377798 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
POLR1E-202ENST00000377798 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
POLR1E-202ENST00000377798 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
POLR1E-202ENST00000377798 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
POLR1E-202ENST00000377798 FCGBPQ9Y6R7 5405 aaPredicted RBP5.74□□□□□ -1.49
POLR1E-202ENST00000377798 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
POLR1E-202ENST00000377798 KMT2DO14686 5537 aa5.73□□□□□ -1.49
POLR1E-202ENST00000377798 KRTAP8-1Q8IUC2 63 aa5.68□□□□□ -1.5
POLR1E-202ENST00000377798 KRTAP9-7A8MTY7 169 aa5.67□□□□□ -1.5
POLR1E-202ENST00000377798 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
POLR1E-202ENST00000377798 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
POLR1E-202ENST00000377798 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
POLR1E-202ENST00000377798 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
POLR1E-202ENST00000377798 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
POLR1E-202ENST00000377798 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
POLR1E-202ENST00000377798 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
POLR1E-202ENST00000377798 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
POLR1E-202ENST00000377798 MT1EP04732 61 aa5.37□□□□□ -1.55
POLR1E-202ENST00000377798 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
POLR1E-202ENST00000377798 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
POLR1E-202ENST00000377798 SPRR2FQ96RM1 72 aa5.28□□□□□ -1.56
POLR1E-202ENST00000377798 MT1LQ93083 61 aa5.26□□□□□ -1.57
POLR1E-202ENST00000377798 KRTAP5-9P26371 169 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms