RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 Q1T7F1 81 aa8.99□□□□□ -0.97
IRF3-203ENST00000377139 KRTAP19-2Q3LHN2 52 aa8.98□□□□□ -0.97
IRF3-203ENST00000377139 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
IRF3-203ENST00000377139 LINC01558Q9Y6Z2 57 aa8.93□□□□□ -0.98
IRF3-203ENST00000377139 CSAG1Q6PB30 78 aa8.86□□□□□ -0.99
IRF3-203ENST00000377139 MUC2Q02817 5179 aa8.85□□□□□ -0.99
IRF3-203ENST00000377139 UBR4Q5T4S7 5183 aa8.85□□□□□ -0.99
IRF3-203ENST00000377139 PRR15LQ9BU68 103 aa8.83□□□□□ -1
IRF3-203ENST00000377139 A0A1B0GU69 56 aa8.82□□□□□ -1
IRF3-203ENST00000377139 SEC61GP60059 68 aa8.81□□□□□ -1
IRF3-203ENST00000377139 RNF213Q63HN8 5207 aa8.81□□□□□ -1
IRF3-203ENST00000377139 PSPHP1O15172 72 aa8.8□□□□□ -1
IRF3-203ENST00000377139 LCE2CQ5TA81 110 aa8.78□□□□□ -1
IRF3-203ENST00000377139 Q5VV11 94 aa8.72□□□□□ -1.01
IRF3-203ENST00000377139 FLGP20930 4061 aaPredicted RBP8.69□□□□□ -1.02
IRF3-203ENST00000377139 H0YAA0 97 aa8.69□□□□□ -1.02
IRF3-203ENST00000377139 MT1HP80294 61 aa8.63□□□□□ -1.03
IRF3-203ENST00000377139 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
IRF3-203ENST00000377139 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
IRF3-203ENST00000377139 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
IRF3-203ENST00000377139 M0R2T5 61 aa8.58□□□□□ -1.04
IRF3-203ENST00000377139 A6NED7 52 aa8.57□□□□□ -1.04
IRF3-203ENST00000377139 A0A1B0GU33 70 aa8.55□□□□□ -1.04
IRF3-203ENST00000377139 UQCR11O14957 56 aa8.55□□□□□ -1.04
IRF3-203ENST00000377139 P0C880 135 aa8.54□□□□□ -1.04
IRF3-203ENST00000377139 FAT4Q6V0I7 4981 aa8.5□□□□□ -1.05
IRF3-203ENST00000377139 SVIPQ8NHG7 77 aa8.45□□□□□ -1.06
IRF3-203ENST00000377139 MIR22HGQ0VDD5 57 aa8.43□□□□□ -1.06
IRF3-203ENST00000377139 BRK1Q8WUW1 75 aa8.43□□□□□ -1.06
IRF3-203ENST00000377139 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
IRF3-203ENST00000377139 CDC42SE1Q9NRR8 79 aa8.41□□□□□ -1.06
IRF3-203ENST00000377139 M0QZ58 72 aa8.39□□□□□ -1.07
IRF3-203ENST00000377139 R4GN34 69 aa8.35□□□□□ -1.07
IRF3-203ENST00000377139 KRTAP13-4Q3LI77 160 aa8.34□□□□□ -1.07
IRF3-203ENST00000377139 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
IRF3-203ENST00000377139 CRIPTQ9P021 101 aa8.33□□□□□ -1.08
IRF3-203ENST00000377139 LORP23490 312 aaPredicted RBP8.3□□□□□ -1.08
IRF3-203ENST00000377139 KRTAP9-8Q9BYQ0 159 aa8.3□□□□□ -1.08
IRF3-203ENST00000377139 A8MU10 97 aa8.28□□□□□ -1.08
IRF3-203ENST00000377139 MT2AP02795 61 aa8.28□□□□□ -1.08
IRF3-203ENST00000377139 KRTAP10-10P60014 251 aa8.23□□□□□ -1.09
IRF3-203ENST00000377139 PRO0628Q9UI54 55 aa8.22□□□□□ -1.09
IRF3-203ENST00000377139 MT1FP04733 61 aa8.21□□□□□ -1.09
IRF3-203ENST00000377139 A0A0D9SG42 100 aa8.2□□□□□ -1.1
IRF3-203ENST00000377139 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
IRF3-203ENST00000377139 SPRR2GQ9BYE4 73 aa8.12□□□□□ -1.11
IRF3-203ENST00000377139 K7ERS5 55 aa8.11□□□□□ -1.11
IRF3-203ENST00000377139 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
IRF3-203ENST00000377139 A6NN06 94 aa8.06□□□□□ -1.12
IRF3-203ENST00000377139 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
IRF3-203ENST00000377139 SPINT4Q6UDR6 99 aa8.03□□□□□ -1.12
IRF3-203ENST00000377139 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
IRF3-203ENST00000377139 KRTAP9-3Q9BYQ3 159 aa8□□□□□ -1.13
IRF3-203ENST00000377139 PMAIP1Q13794 54 aa7.97□□□□□ -1.13
IRF3-203ENST00000377139 KRTAP19-8Q3LI54 63 aa7.91□□□□□ -1.14
IRF3-203ENST00000377139 PLAC4Q8WY50 150 aa7.87□□□□□ -1.15
IRF3-203ENST00000377139 CAMK2N1Q7Z7J9 78 aa7.81□□□□□ -1.16
IRF3-203ENST00000377139 MT1BP07438 61 aa7.78□□□□□ -1.16
IRF3-203ENST00000377139 LCE2BO14633 110 aa7.77□□□□□ -1.17
IRF3-203ENST00000377139 ROMO1P60602 79 aa7.73□□□□□ -1.17
IRF3-203ENST00000377139 KTN1-AS1Q86SY8 53 aa7.63□□□□□ -1.19
IRF3-203ENST00000377139 LCE2DQ5TA82 110 aaPredicted RBP7.61□□□□□ -1.19
IRF3-203ENST00000377139 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
IRF3-203ENST00000377139 PRO2289Q9P1D8 64 aa7.52□□□□□ -1.2
IRF3-203ENST00000377139 MT1XP80297 61 aa7.52□□□□□ -1.21
IRF3-203ENST00000377139 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
IRF3-203ENST00000377139 KRTAP25-1Q3LHN0 102 aa7.46□□□□□ -1.21
IRF3-203ENST00000377139 KRTAP9-2Q9BYQ4 174 aa7.46□□□□□ -1.21
IRF3-203ENST00000377139 USH2AO75445 5202 aa7.46□□□□□ -1.22
IRF3-203ENST00000377139 TNP1P09430 55 aa7.44□□□□□ -1.22
IRF3-203ENST00000377139 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
IRF3-203ENST00000377139 KRTAP19-6Q3LI70 58 aa7.35□□□□□ -1.23
IRF3-203ENST00000377139 SSPOA2VEC9 5147 aa7.25□□□□□ -1.25
IRF3-203ENST00000377139 FSIP2Q5CZC0 6907 aa7.24□□□□□ -1.25
IRF3-203ENST00000377139 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
IRF3-203ENST00000377139 PP632Q6XCG6 107 aa7.22□□□□□ -1.25
IRF3-203ENST00000377139 KRTAP10-7P60409 375 aaPredicted RBP7.2□□□□□ -1.26
IRF3-203ENST00000377139 KRTAP10-12P60413 245 aa7.16□□□□□ -1.26
IRF3-203ENST00000377139 CRCT1Q9UGL9 99 aa7.12□□□□□ -1.27
IRF3-203ENST00000377139 KRTAP9-6A0A140TA67 174 aa7.11□□□□□ -1.27
IRF3-203ENST00000377139 LCE3AQ5TA76 89 aa7.09□□□□□ -1.28
IRF3-203ENST00000377139 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.3
IRF3-203ENST00000377139 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
IRF3-203ENST00000377139 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
IRF3-203ENST00000377139 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
IRF3-203ENST00000377139 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
IRF3-203ENST00000377139 KMT2DO14686 5537 aa6.78□□□□□ -1.32
IRF3-203ENST00000377139 KRTAP19-5Q3LI72 72 aa6.78□□□□□ -1.32
IRF3-203ENST00000377139 KRTAP19-7Q3SYF9 63 aa6.71□□□□□ -1.34
IRF3-203ENST00000377139 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
IRF3-203ENST00000377139 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
IRF3-203ENST00000377139 MT1EP04732 61 aa6.61□□□□□ -1.35
IRF3-203ENST00000377139 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
IRF3-203ENST00000377139 SPRR2FQ96RM1 72 aa6.51□□□□□ -1.37
IRF3-203ENST00000377139 KRTAP5-9P26371 169 aa6.47□□□□□ -1.37
IRF3-203ENST00000377139 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
IRF3-203ENST00000377139 MT1LQ93083 61 aa6.47□□□□□ -1.37
IRF3-203ENST00000377139 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
IRF3-203ENST00000377139 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
IRF3-203ENST00000377139 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms