RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 CSAG1Q6PB30 78 aa10.62□□□□□ -0.71
YIF1A-202ENST00000376899 KRTAP3-3Q9BYR6 98 aa10.61□□□□□ -0.71
YIF1A-202ENST00000376899 CRCT1Q9UGL9 99 aa10.61□□□□□ -0.71
YIF1A-202ENST00000376899 LCE2BO14633 110 aa10.54□□□□□ -0.72
YIF1A-202ENST00000376899 DMAC1Q96GE9 116 aa10.45□□□□□ -0.74
YIF1A-202ENST00000376899 NDUFC1O43677 76 aa10.44□□□□□ -0.74
YIF1A-202ENST00000376899 USH2AO75445 5202 aa10.43□□□□□ -0.74
YIF1A-202ENST00000376899 SERP2Q8N6R1 65 aa10.4□□□□□ -0.74
YIF1A-202ENST00000376899 SNURFQ9Y675 71 aa10.34□□□□□ -0.75
YIF1A-202ENST00000376899 H0YAA0 97 aa10.32□□□□□ -0.76
YIF1A-202ENST00000376899 KRTAP19-1Q8IUB9 90 aa10.3□□□□□ -0.76
YIF1A-202ENST00000376899 C20orf197Q8N268 126 aa10.3□□□□□ -0.76
YIF1A-202ENST00000376899 ACYP2P14621 99 aa10.24□□□□□ -0.77
YIF1A-202ENST00000376899 SSPOA2VEC9 5147 aa10.24□□□□□ -0.77
YIF1A-202ENST00000376899 SPRR2GQ9BYE4 73 aa10.23□□□□□ -0.77
YIF1A-202ENST00000376899 SPANXA2-OT1Q8N9U9 137 aa10.21□□□□□ -0.77
YIF1A-202ENST00000376899 CRIPTQ9P021 101 aa10.19□□□□□ -0.78
YIF1A-202ENST00000376899 COX7CP15954 63 aa10.18□□□□□ -0.78
YIF1A-202ENST00000376899 ADM2Q7Z4H4 148 aa10.15□□□□□ -0.78
YIF1A-202ENST00000376899 KRTAP19-6Q3LI70 58 aa10.13□□□□□ -0.79
YIF1A-202ENST00000376899 KRTAP19-8Q3LI54 63 aa10.12□□□□□ -0.79
YIF1A-202ENST00000376899 MT1BP07438 61 aa10.06□□□□□ -0.8
YIF1A-202ENST00000376899 Q5VV11 94 aa10.04□□□□□ -0.8
YIF1A-202ENST00000376899 SPTSSBQ8NFR3 76 aa10.04□□□□□ -0.8
YIF1A-202ENST00000376899 CHKB-CPT1BH3BT56 60 aa10.02□□□□□ -0.81
YIF1A-202ENST00000376899 FCGBPQ9Y6R7 5405 aaPredicted RBP10□□□□□ -0.81
YIF1A-202ENST00000376899 P0C880 135 aa9.99□□□□□ -0.81
YIF1A-202ENST00000376899 ANAPC13Q9BS18 74 aa9.99□□□□□ -0.81
YIF1A-202ENST00000376899 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
YIF1A-202ENST00000376899 CYSTM1Q9H1C7 97 aa9.97□□□□□ -0.81
YIF1A-202ENST00000376899 H7BZZ5 65 aa9.96□□□□□ -0.82
YIF1A-202ENST00000376899 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.92□□□□□ -0.82
YIF1A-202ENST00000376899 COA5Q86WW8 74 aa9.87□□□□□ -0.83
YIF1A-202ENST00000376899 R4GN34 69 aa9.86□□□□□ -0.83
YIF1A-202ENST00000376899 KRTAP9-7A8MTY7 169 aa9.83□□□□□ -0.84
YIF1A-202ENST00000376899 M0QZ58 72 aa9.8□□□□□ -0.84
YIF1A-202ENST00000376899 CCDC179H3BU77 68 aa9.79□□□□□ -0.84
YIF1A-202ENST00000376899 A6NN06 94 aa9.76□□□□□ -0.85
YIF1A-202ENST00000376899 KRTAP10-5P60370 271 aa9.75□□□□□ -0.85
YIF1A-202ENST00000376899 PCP4P48539 62 aa9.69□□□□□ -0.86
YIF1A-202ENST00000376899 PLAC4Q8WY50 150 aa9.62□□□□□ -0.87
YIF1A-202ENST00000376899 MACF1Q9UPN3 7388 aaKnown RBP9.61□□□□□ -0.87
YIF1A-202ENST00000376899 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
YIF1A-202ENST00000376899 ATP5EP56381 51 aaPredicted RBP9.59□□□□□ -0.87
YIF1A-202ENST00000376899 MT1XP80297 61 aa9.52□□□□□ -0.89
YIF1A-202ENST00000376899 SYNE2Q8WXH0 6885 aaKnown RBP9.51□□□□□ -0.89
YIF1A-202ENST00000376899 SEC61GP60059 68 aa9.51□□□□□ -0.89
YIF1A-202ENST00000376899 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
YIF1A-202ENST00000376899 SERP1Q9Y6X1 66 aa9.5□□□□□ -0.89
YIF1A-202ENST00000376899 PRO2289Q9P1D8 64 aa9.49□□□□□ -0.89
YIF1A-202ENST00000376899 TMEM258P61165 79 aa9.46□□□□□ -0.9
YIF1A-202ENST00000376899 KRTAP6-3Q3LI67 103 aa9.37□□□□□ -0.91
YIF1A-202ENST00000376899 A0A1B0GU33 70 aa9.34□□□□□ -0.91
YIF1A-202ENST00000376899 A0A1B0GU69 56 aa9.33□□□□□ -0.92
YIF1A-202ENST00000376899 SPATA8Q6RVD6 105 aa9.26□□□□□ -0.93
YIF1A-202ENST00000376899 KRTAP12-2P59991 146 aa9.24□□□□□ -0.93
YIF1A-202ENST00000376899 LINC01558Q9Y6Z2 57 aa9.2□□□□□ -0.94
YIF1A-202ENST00000376899 A0A0D9SG42 100 aa9.19□□□□□ -0.94
YIF1A-202ENST00000376899 PRR15LQ9BU68 103 aa9.16□□□□□ -0.94
YIF1A-202ENST00000376899 KRTAP5-9P26371 169 aa9.12□□□□□ -0.95
YIF1A-202ENST00000376899 CAMK2N1Q7Z7J9 78 aa9.11□□□□□ -0.95
YIF1A-202ENST00000376899 SMIM26A0A096LP01 95 aa9.08□□□□□ -0.96
YIF1A-202ENST00000376899 KRTAP12-1P59990 96 aa9.08□□□□□ -0.96
YIF1A-202ENST00000376899 KRTAP10-7P60409 375 aaPredicted RBP9.07□□□□□ -0.96
YIF1A-202ENST00000376899 KRTAP10-12P60413 245 aa9.06□□□□□ -0.96
YIF1A-202ENST00000376899 SPINT4Q6UDR6 99 aa9.04□□□□□ -0.96
YIF1A-202ENST00000376899 KMT2DO14686 5537 aa9□□□□□ -0.97
YIF1A-202ENST00000376899 A8MU10 97 aa9□□□□□ -0.97
YIF1A-202ENST00000376899 KRTAP8-1Q8IUC2 63 aa8.97□□□□□ -0.97
YIF1A-202ENST00000376899 NEBP20929 6669 aa8.95□□□□□ -0.98
YIF1A-202ENST00000376899 KRTAP4-8A0A0G2JLE6 195 aa8.95□□□□□ -0.98
YIF1A-202ENST00000376899 KRTAP4-8Q9BYQ9 185 aa8.95□□□□□ -0.98
YIF1A-202ENST00000376899 UQCR11O14957 56 aa8.88□□□□□ -0.99
YIF1A-202ENST00000376899 SPRR2FQ96RM1 72 aa8.87□□□□□ -0.99
YIF1A-202ENST00000376899 MUC12Q9UKN1 5478 aa8.87□□□□□ -0.99
YIF1A-202ENST00000376899 V9GYY9 64 aa8.86□□□□□ -0.99
YIF1A-202ENST00000376899 Q1T7F1 81 aa8.84□□□□□ -0.99
YIF1A-202ENST00000376899 PSPHP1O15172 72 aa8.73□□□□□ -1.01
YIF1A-202ENST00000376899 RPS28P62857 69 aaKnown RBP8.72□□□□□ -1.01
YIF1A-202ENST00000376899 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
YIF1A-202ENST00000376899 MDN1Q9NU22 5596 aa8.69□□□□□ -1.02
YIF1A-202ENST00000376899 SPRR2EP22531 72 aa8.66□□□□□ -1.02
YIF1A-202ENST00000376899 SPRR2BP35325 72 aa8.66□□□□□ -1.02
YIF1A-202ENST00000376899 SPRR2AP35326 72 aa8.66□□□□□ -1.02
YIF1A-202ENST00000376899 C10orf95Q9H7T3 257 aa8.64□□□□□ -1.03
YIF1A-202ENST00000376899 LCE1AQ5T7P2 110 aa8.63□□□□□ -1.03
YIF1A-202ENST00000376899 KRTAP20-1Q3LI63 56 aa8.57□□□□□ -1.04
YIF1A-202ENST00000376899 TNP1P09430 55 aa8.52□□□□□ -1.05
YIF1A-202ENST00000376899 KRTAP19-7Q3SYF9 63 aa8.51□□□□□ -1.05
YIF1A-202ENST00000376899 A6NED7 52 aa8.46□□□□□ -1.06
YIF1A-202ENST00000376899 K7ERS5 55 aa8.45□□□□□ -1.06
YIF1A-202ENST00000376899 MT1EP04732 61 aa8.41□□□□□ -1.06
YIF1A-202ENST00000376899 SPRR2DP22532 72 aa8.37□□□□□ -1.07
YIF1A-202ENST00000376899 KRTAP2-3P0C7H8 128 aa8.36□□□□□ -1.07
YIF1A-202ENST00000376899 KRTAP19-5Q3LI72 72 aa8.36□□□□□ -1.07
YIF1A-202ENST00000376899 LCE3AQ5TA76 89 aa8.36□□□□□ -1.07
YIF1A-202ENST00000376899 KRTAP2-4Q9BYR9 128 aa8.36□□□□□ -1.07
YIF1A-202ENST00000376899 SVIPQ8NHG7 77 aa8.33□□□□□ -1.08
YIF1A-202ENST00000376899 KRTAP19-3Q7Z4W3 81 aa8.26□□□□□ -1.09
YIF1A-202ENST00000376899 KRTAP25-1Q3LHN0 102 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms