RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 A0A1B0GU69 56 aa8.62□□□□□ -1.03
HLA-A-202ENST00000376806 A6NED7 52 aa8.61□□□□□ -1.03
HLA-A-202ENST00000376806 LRP2P98164 4655 aa8.6□□□□□ -1.03
HLA-A-202ENST00000376806 A8MU10 97 aa8.52□□□□□ -1.05
HLA-A-202ENST00000376806 LCA10Q71F78 164 aa8.51□□□□□ -1.05
HLA-A-202ENST00000376806 SEC61BP60468 96 aaKnown RBP8.5□□□□□ -1.05
HLA-A-202ENST00000376806 CDC42SE1Q9NRR8 79 aa8.49□□□□□ -1.05
HLA-A-202ENST00000376806 SEC61GP60059 68 aa8.47□□□□□ -1.05
HLA-A-202ENST00000376806 S4R3F8 94 aa8.47□□□□□ -1.05
HLA-A-202ENST00000376806 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
HLA-A-202ENST00000376806 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
HLA-A-202ENST00000376806 RBM12B-AS1Q9P1G2 102 aa8.45□□□□□ -1.06
HLA-A-202ENST00000376806 UQCR11O14957 56 aa8.4□□□□□ -1.07
HLA-A-202ENST00000376806 UBR4Q5T4S7 5183 aa8.38□□□□□ -1.07
HLA-A-202ENST00000376806 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
HLA-A-202ENST00000376806 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
HLA-A-202ENST00000376806 MUC17Q685J3 4493 aa8.34□□□□□ -1.07
HLA-A-202ENST00000376806 KRTAP4-1Q9BYQ7 146 aa8.34□□□□□ -1.07
HLA-A-202ENST00000376806 A0A1B0GU33 70 aa8.28□□□□□ -1.08
HLA-A-202ENST00000376806 MUC2Q02817 5179 aa8.27□□□□□ -1.09
HLA-A-202ENST00000376806 H0YAA0 97 aa8.23□□□□□ -1.09
HLA-A-202ENST00000376806 KRTAP10-6P60371 365 aaPredicted RBP8.23□□□□□ -1.09
HLA-A-202ENST00000376806 PMAIP1Q13794 54 aa8.22□□□□□ -1.09
HLA-A-202ENST00000376806 RNF213Q63HN8 5207 aa8.22□□□□□ -1.09
HLA-A-202ENST00000376806 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.09
HLA-A-202ENST00000376806 CSAG1Q6PB30 78 aa8.21□□□□□ -1.1
HLA-A-202ENST00000376806 A6NN06 94 aa8.17□□□□□ -1.1
HLA-A-202ENST00000376806 KRTAP19-2Q3LHN2 52 aa8.16□□□□□ -1.1
HLA-A-202ENST00000376806 P0C880 135 aa8.13□□□□□ -1.11
HLA-A-202ENST00000376806 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
HLA-A-202ENST00000376806 KRTAP13-4Q3LI77 160 aa8.06□□□□□ -1.12
HLA-A-202ENST00000376806 KTN1-AS1Q86SY8 53 aa7.98□□□□□ -1.13
HLA-A-202ENST00000376806 FAT4Q6V0I7 4981 aa7.95□□□□□ -1.14
HLA-A-202ENST00000376806 FLGP20930 4061 aaPredicted RBP7.94□□□□□ -1.14
HLA-A-202ENST00000376806 A0A0D9SG42 100 aa7.93□□□□□ -1.14
HLA-A-202ENST00000376806 M0QZ58 72 aa7.89□□□□□ -1.15
HLA-A-202ENST00000376806 K7ERS5 55 aa7.89□□□□□ -1.15
HLA-A-202ENST00000376806 LCE2CQ5TA81 110 aa7.89□□□□□ -1.15
HLA-A-202ENST00000376806 R4GN34 69 aa7.8□□□□□ -1.16
HLA-A-202ENST00000376806 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
HLA-A-202ENST00000376806 KRTAP12-1P59990 96 aa7.75□□□□□ -1.17
HLA-A-202ENST00000376806 KRTAP12-2P59991 146 aa7.75□□□□□ -1.17
HLA-A-202ENST00000376806 MT1HP80294 61 aa7.72□□□□□ -1.17
HLA-A-202ENST00000376806 PRAC1Q96KF2 57 aa7.72□□□□□ -1.17
HLA-A-202ENST00000376806 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
HLA-A-202ENST00000376806 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
HLA-A-202ENST00000376806 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
HLA-A-202ENST00000376806 ROMO1P60602 79 aa7.63□□□□□ -1.19
HLA-A-202ENST00000376806 M0R2T5 61 aa7.62□□□□□ -1.19
HLA-A-202ENST00000376806 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
HLA-A-202ENST00000376806 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
HLA-A-202ENST00000376806 MT2AP02795 61 aa7.45□□□□□ -1.22
HLA-A-202ENST00000376806 KRTAP9-8Q9BYQ0 159 aa7.43□□□□□ -1.22
HLA-A-202ENST00000376806 MT1FP04733 61 aa7.42□□□□□ -1.22
HLA-A-202ENST00000376806 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
HLA-A-202ENST00000376806 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
HLA-A-202ENST00000376806 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
HLA-A-202ENST00000376806 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
HLA-A-202ENST00000376806 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
HLA-A-202ENST00000376806 PLAC4Q8WY50 150 aa7.21□□□□□ -1.25
HLA-A-202ENST00000376806 KRTAP19-8Q3LI54 63 aa7.17□□□□□ -1.26
HLA-A-202ENST00000376806 H3BS24 57 aa7.15□□□□□ -1.26
HLA-A-202ENST00000376806 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.27
HLA-A-202ENST00000376806 MT1BP07438 61 aa7.08□□□□□ -1.28
HLA-A-202ENST00000376806 LCE2DQ5TA82 110 aaPredicted RBP7.04□□□□□ -1.28
HLA-A-202ENST00000376806 LCE2BO14633 110 aa7.03□□□□□ -1.28
HLA-A-202ENST00000376806 TNP1P09430 55 aa7.02□□□□□ -1.29
HLA-A-202ENST00000376806 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
HLA-A-202ENST00000376806 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
HLA-A-202ENST00000376806 USH2AO75445 5202 aa6.93□□□□□ -1.3
HLA-A-202ENST00000376806 FSIP2Q5CZC0 6907 aa6.91□□□□□ -1.3
HLA-A-202ENST00000376806 MT1XP80297 61 aa6.91□□□□□ -1.3
HLA-A-202ENST00000376806 KRTAP10-5P60370 271 aa6.9□□□□□ -1.3
HLA-A-202ENST00000376806 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
HLA-A-202ENST00000376806 SSPOA2VEC9 5147 aa6.79□□□□□ -1.32
HLA-A-202ENST00000376806 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
HLA-A-202ENST00000376806 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
HLA-A-202ENST00000376806 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
HLA-A-202ENST00000376806 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
HLA-A-202ENST00000376806 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
HLA-A-202ENST00000376806 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
HLA-A-202ENST00000376806 KRTAP19-6Q3LI70 58 aa6.62□□□□□ -1.35
HLA-A-202ENST00000376806 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
HLA-A-202ENST00000376806 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
HLA-A-202ENST00000376806 FCGBPQ9Y6R7 5405 aaPredicted RBP6.53□□□□□ -1.36
HLA-A-202ENST00000376806 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
HLA-A-202ENST00000376806 A0A0A0MQY5 61 aa6.38□□□□□ -1.39
HLA-A-202ENST00000376806 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
HLA-A-202ENST00000376806 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
HLA-A-202ENST00000376806 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
HLA-A-202ENST00000376806 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
HLA-A-202ENST00000376806 NDUFAF8A1L188 74 aa6.27□□□□□ -1.41
HLA-A-202ENST00000376806 KMT2DO14686 5537 aa6.24□□□□□ -1.41
HLA-A-202ENST00000376806 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
HLA-A-202ENST00000376806 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
HLA-A-202ENST00000376806 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
HLA-A-202ENST00000376806 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
HLA-A-202ENST00000376806 SYNE2Q8WXH0 6885 aaKnown RBP6.1□□□□□ -1.43
HLA-A-202ENST00000376806 MT1EP04732 61 aa6.03□□□□□ -1.44
HLA-A-202ENST00000376806 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms