RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 CRCT1Q9UGL9 99 aa9.36□□□□□ -0.91
DDR1-228ENST00000376575 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
DDR1-228ENST00000376575 SERP2Q8N6R1 65 aa9.32□□□□□ -0.92
DDR1-228ENST00000376575 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
DDR1-228ENST00000376575 SNURFQ9Y675 71 aa9.23□□□□□ -0.93
DDR1-228ENST00000376575 LCE2BO14633 110 aa9.22□□□□□ -0.93
DDR1-228ENST00000376575 NDUFC1O43677 76 aa9.21□□□□□ -0.94
DDR1-228ENST00000376575 C20orf197Q8N268 126 aa9.2□□□□□ -0.94
DDR1-228ENST00000376575 USH2AO75445 5202 aa9.19□□□□□ -0.94
DDR1-228ENST00000376575 COX7CP15954 63 aa9.15□□□□□ -0.94
DDR1-228ENST00000376575 H0YAA0 97 aa9.12□□□□□ -0.95
DDR1-228ENST00000376575 SPANXA2-OT1Q8N9U9 137 aa9.12□□□□□ -0.95
DDR1-228ENST00000376575 ACYP2P14621 99 aa9.1□□□□□ -0.95
DDR1-228ENST00000376575 KRTAP19-1Q8IUB9 90 aa9.06□□□□□ -0.96
DDR1-228ENST00000376575 SSPOA2VEC9 5147 aa9.04□□□□□ -0.96
DDR1-228ENST00000376575 SPRR2GQ9BYE4 73 aa9.01□□□□□ -0.97
DDR1-228ENST00000376575 ANAPC13Q9BS18 74 aa8.98□□□□□ -0.97
DDR1-228ENST00000376575 CYSTM1Q9H1C7 97 aa8.97□□□□□ -0.97
DDR1-228ENST00000376575 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
DDR1-228ENST00000376575 H7BZZ5 65 aa8.95□□□□□ -0.98
DDR1-228ENST00000376575 ADM2Q7Z4H4 148 aa8.95□□□□□ -0.98
DDR1-228ENST00000376575 KRTAP19-8Q3LI54 63 aa8.89□□□□□ -0.99
DDR1-228ENST00000376575 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
DDR1-228ENST00000376575 SPTSSBQ8NFR3 76 aa8.87□□□□□ -0.99
DDR1-228ENST00000376575 CHKB-CPT1BH3BT56 60 aa8.86□□□□□ -0.99
DDR1-228ENST00000376575 KRTAP19-6Q3LI70 58 aa8.84□□□□□ -0.99
DDR1-228ENST00000376575 CCDC179H3BU77 68 aa8.83□□□□□ -1
DDR1-228ENST00000376575 P0C880 135 aa8.83□□□□□ -1
DDR1-228ENST00000376575 MT1BP07438 61 aa8.82□□□□□ -1
DDR1-228ENST00000376575 COA5Q86WW8 74 aa8.79□□□□□ -1
DDR1-228ENST00000376575 KRTAP9-7A8MTY7 169 aa8.78□□□□□ -1
DDR1-228ENST00000376575 Q5VV11 94 aa8.77□□□□□ -1.01
DDR1-228ENST00000376575 FCGBPQ9Y6R7 5405 aaPredicted RBP8.77□□□□□ -1.01
DDR1-228ENST00000376575 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.73□□□□□ -1.01
DDR1-228ENST00000376575 R4GN34 69 aa8.67□□□□□ -1.02
DDR1-228ENST00000376575 M0QZ58 72 aa8.62□□□□□ -1.03
DDR1-228ENST00000376575 ATP5EP56381 51 aaPredicted RBP8.6□□□□□ -1.03
DDR1-228ENST00000376575 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
DDR1-228ENST00000376575 TMEM258P61165 79 aa8.52□□□□□ -1.05
DDR1-228ENST00000376575 A6NN06 94 aa8.49□□□□□ -1.05
DDR1-228ENST00000376575 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
DDR1-228ENST00000376575 PLAC4Q8WY50 150 aa8.44□□□□□ -1.06
DDR1-228ENST00000376575 SEC61GP60059 68 aa8.43□□□□□ -1.06
DDR1-228ENST00000376575 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
DDR1-228ENST00000376575 SERP1Q9Y6X1 66 aa8.42□□□□□ -1.06
DDR1-228ENST00000376575 MT1XP80297 61 aa8.37□□□□□ -1.07
DDR1-228ENST00000376575 MACF1Q9UPN3 7388 aaKnown RBP8.35□□□□□ -1.07
DDR1-228ENST00000376575 SYNE2Q8WXH0 6885 aaKnown RBP8.35□□□□□ -1.07
DDR1-228ENST00000376575 A0A1B0GU33 70 aa8.3□□□□□ -1.08
DDR1-228ENST00000376575 A0A1B0GU69 56 aa8.3□□□□□ -1.08
DDR1-228ENST00000376575 PRO2289Q9P1D8 64 aa8.3□□□□□ -1.08
DDR1-228ENST00000376575 LINC01558Q9Y6Z2 57 aa8.25□□□□□ -1.09
DDR1-228ENST00000376575 SPATA8Q6RVD6 105 aa8.22□□□□□ -1.09
DDR1-228ENST00000376575 PCP4P48539 62 aa8.17□□□□□ -1.1
DDR1-228ENST00000376575 PRR15LQ9BU68 103 aa8.16□□□□□ -1.1
DDR1-228ENST00000376575 KRTAP6-3Q3LI67 103 aa8.12□□□□□ -1.11
DDR1-228ENST00000376575 A0A0D9SG42 100 aa8.11□□□□□ -1.11
DDR1-228ENST00000376575 KRTAP12-2P59991 146 aa8.1□□□□□ -1.11
DDR1-228ENST00000376575 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
DDR1-228ENST00000376575 SMIM26A0A096LP01 95 aa8.05□□□□□ -1.12
DDR1-228ENST00000376575 KMT2DO14686 5537 aa8.01□□□□□ -1.13
DDR1-228ENST00000376575 A8MU10 97 aa8□□□□□ -1.13
DDR1-228ENST00000376575 CAMK2N1Q7Z7J9 78 aa8□□□□□ -1.13
DDR1-228ENST00000376575 Q1T7F1 81 aa7.98□□□□□ -1.13
DDR1-228ENST00000376575 KRTAP10-7P60409 375 aaPredicted RBP7.97□□□□□ -1.13
DDR1-228ENST00000376575 KRTAP10-12P60413 245 aa7.97□□□□□ -1.13
DDR1-228ENST00000376575 SPINT4Q6UDR6 99 aa7.97□□□□□ -1.13
DDR1-228ENST00000376575 V9GYY9 64 aa7.96□□□□□ -1.14
DDR1-228ENST00000376575 KRTAP5-9P26371 169 aa7.95□□□□□ -1.14
DDR1-228ENST00000376575 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
DDR1-228ENST00000376575 UQCR11O14957 56 aa7.93□□□□□ -1.14
DDR1-228ENST00000376575 NEBP20929 6669 aa7.92□□□□□ -1.14
DDR1-228ENST00000376575 KRTAP4-8A0A0G2JLE6 195 aa7.86□□□□□ -1.15
DDR1-228ENST00000376575 KRTAP4-8Q9BYQ9 185 aa7.86□□□□□ -1.15
DDR1-228ENST00000376575 MUC12Q9UKN1 5478 aa7.85□□□□□ -1.15
DDR1-228ENST00000376575 PSPHP1O15172 72 aa7.83□□□□□ -1.16
DDR1-228ENST00000376575 KRTAP8-1Q8IUC2 63 aa7.81□□□□□ -1.16
DDR1-228ENST00000376575 MIR22HGQ0VDD5 57 aa7.77□□□□□ -1.17
DDR1-228ENST00000376575 SPRR2FQ96RM1 72 aa7.71□□□□□ -1.18
DDR1-228ENST00000376575 MDN1Q9NU22 5596 aa7.67□□□□□ -1.18
DDR1-228ENST00000376575 KRTAP20-1Q3LI63 56 aa7.67□□□□□ -1.18
DDR1-228ENST00000376575 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
DDR1-228ENST00000376575 A6NED7 52 aa7.57□□□□□ -1.2
DDR1-228ENST00000376575 TNP1P09430 55 aa7.52□□□□□ -1.21
DDR1-228ENST00000376575 LCE1AQ5T7P2 110 aa7.52□□□□□ -1.21
DDR1-228ENST00000376575 K7ERS5 55 aa7.5□□□□□ -1.21
DDR1-228ENST00000376575 SPRR2EP22531 72 aa7.49□□□□□ -1.21
DDR1-228ENST00000376575 SPRR2BP35325 72 aa7.49□□□□□ -1.21
DDR1-228ENST00000376575 SPRR2AP35326 72 aa7.49□□□□□ -1.21
DDR1-228ENST00000376575 KRTAP19-7Q3SYF9 63 aa7.49□□□□□ -1.21
DDR1-228ENST00000376575 MT1EP04732 61 aa7.39□□□□□ -1.23
DDR1-228ENST00000376575 LCE3AQ5TA76 89 aa7.37□□□□□ -1.23
DDR1-228ENST00000376575 CDC42SE1Q9NRR8 79 aa7.37□□□□□ -1.23
DDR1-228ENST00000376575 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
DDR1-228ENST00000376575 KRTAP2-3P0C7H8 128 aa7.32□□□□□ -1.24
DDR1-228ENST00000376575 KRTAP25-1Q3LHN0 102 aa7.32□□□□□ -1.24
DDR1-228ENST00000376575 KRTAP2-4Q9BYR9 128 aa7.32□□□□□ -1.24
DDR1-228ENST00000376575 SPRR2DP22532 72 aa7.23□□□□□ -1.25
DDR1-228ENST00000376575 LCE5AQ5TCM9 118 aa7.23□□□□□ -1.25
DDR1-228ENST00000376575 KRTAP19-3Q7Z4W3 81 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms