RNA–Protein interactions for RNA: ENST00000376504.3

PTF1A-201, Transcript of pancreas associated transcription factor 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTF1A, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1A-201ENST00000376504 LCA10Q71F78 164 aa15.51■□□□□ 0.07
PTF1A-201ENST00000376504 TMEM258P61165 79 aa15.47■□□□□ 0.07
PTF1A-201ENST00000376504 KRTAP3-3Q9BYR6 98 aa15.44■□□□□ 0.06
PTF1A-201ENST00000376504 M0R2T5 61 aa15.4■□□□□ 0.06
PTF1A-201ENST00000376504 ATP5EP56381 51 aaPredicted RBP15.4■□□□□ 0.06
PTF1A-201ENST00000376504 COA5Q86WW8 74 aa15.32■□□□□ 0.04
PTF1A-201ENST00000376504 KRTAP3-2Q9BYR7 98 aa15.32■□□□□ 0.04
PTF1A-201ENST00000376504 CSAG1Q6PB30 78 aa15.26■□□□□ 0.03
PTF1A-201ENST00000376504 CHKB-CPT1BH3BT56 60 aa15.25■□□□□ 0.03
PTF1A-201ENST00000376504 KRTAP10-6P60371 365 aaPredicted RBP15.2■□□□□ 0.02
PTF1A-201ENST00000376504 LORP23490 312 aaPredicted RBP15.14■□□□□ 0.01
PTF1A-201ENST00000376504 SPTSSBQ8NFR3 76 aa15.07■□□□□ 0
PTF1A-201ENST00000376504 KRTAP9-8Q9BYQ0 159 aa15.03■□□□□ -0
PTF1A-201ENST00000376504 SERP1Q9Y6X1 66 aa14.99□□□□□ -0.01
PTF1A-201ENST00000376504 MT2AP02795 61 aa14.92□□□□□ -0.02
PTF1A-201ENST00000376504 H0YAA0 97 aa14.88□□□□□ -0.03
PTF1A-201ENST00000376504 MT1FP04733 61 aa14.83□□□□□ -0.04
PTF1A-201ENST00000376504 ADM2Q7Z4H4 148 aa14.79□□□□□ -0.04
PTF1A-201ENST00000376504 KRTAP10-10P60014 251 aa14.74□□□□□ -0.05
PTF1A-201ENST00000376504 RPS28P62857 69 aaKnown RBP14.68□□□□□ -0.06
PTF1A-201ENST00000376504 P0C880 135 aa14.66□□□□□ -0.06
PTF1A-201ENST00000376504 LINC01558Q9Y6Z2 57 aa14.54□□□□□ -0.08
PTF1A-201ENST00000376504 KRTAP9-3Q9BYQ3 159 aa14.52□□□□□ -0.08
PTF1A-201ENST00000376504 SEC61GP60059 68 aa14.51□□□□□ -0.09
PTF1A-201ENST00000376504 SMIM26A0A096LP01 95 aa14.49□□□□□ -0.09
PTF1A-201ENST00000376504 A0A1B0GU69 56 aa14.46□□□□□ -0.09
PTF1A-201ENST00000376504 CRIPTQ9P021 101 aa14.43□□□□□ -0.1
PTF1A-201ENST00000376504 Q1T7F1 81 aa14.37□□□□□ -0.11
PTF1A-201ENST00000376504 KRTAP19-1Q8IUB9 90 aa14.36□□□□□ -0.11
PTF1A-201ENST00000376504 V9GYY9 64 aa14.34□□□□□ -0.11
PTF1A-201ENST00000376504 SPRR2GQ9BYE4 73 aa14.32□□□□□ -0.12
PTF1A-201ENST00000376504 PRR15LQ9BU68 103 aa14.31□□□□□ -0.12
PTF1A-201ENST00000376504 R4GN34 69 aa14.28□□□□□ -0.12
PTF1A-201ENST00000376504 M0QZ58 72 aa14.25□□□□□ -0.13
PTF1A-201ENST00000376504 A0A1B0GU33 70 aa14.22□□□□□ -0.13
PTF1A-201ENST00000376504 LCE2BO14633 110 aa14.21□□□□□ -0.13
PTF1A-201ENST00000376504 KRTAP13-4Q3LI77 160 aa14.19□□□□□ -0.14
PTF1A-201ENST00000376504 PSPHP1O15172 72 aa14.15□□□□□ -0.14
PTF1A-201ENST00000376504 KRTAP19-8Q3LI54 63 aa14.05□□□□□ -0.16
PTF1A-201ENST00000376504 Q5VV11 94 aa14.05□□□□□ -0.16
PTF1A-201ENST00000376504 SPATA8Q6RVD6 105 aa14.05□□□□□ -0.16
PTF1A-201ENST00000376504 KRTAP9-2Q9BYQ4 174 aa14.05□□□□□ -0.16
PTF1A-201ENST00000376504 LINC01554Q52M75 96 aa13.98□□□□□ -0.17
PTF1A-201ENST00000376504 USH2AO75445 5202 aa13.97□□□□□ -0.17
PTF1A-201ENST00000376504 MT1BP07438 61 aa13.93□□□□□ -0.18
PTF1A-201ENST00000376504 UQCR11O14957 56 aa13.91□□□□□ -0.18
PTF1A-201ENST00000376504 A0A0D9SG42 100 aa13.81□□□□□ -0.2
PTF1A-201ENST00000376504 A8MU10 97 aa13.77□□□□□ -0.21
PTF1A-201ENST00000376504 A6NN06 94 aa13.74□□□□□ -0.21
PTF1A-201ENST00000376504 MIR22HGQ0VDD5 57 aa13.72□□□□□ -0.21
PTF1A-201ENST00000376504 A6NED7 52 aa13.7□□□□□ -0.22
PTF1A-201ENST00000376504 PLAC4Q8WY50 150 aa13.65□□□□□ -0.22
PTF1A-201ENST00000376504 SSPOA2VEC9 5147 aa13.62□□□□□ -0.23
PTF1A-201ENST00000376504 KRTAP12-1P59990 96 aa13.59□□□□□ -0.23
PTF1A-201ENST00000376504 FSIP2Q5CZC0 6907 aa13.56□□□□□ -0.24
PTF1A-201ENST00000376504 KRTAP12-2P59991 146 aa13.53□□□□□ -0.24
PTF1A-201ENST00000376504 SPINT4Q6UDR6 99 aa13.52□□□□□ -0.25
PTF1A-201ENST00000376504 KRTAP19-6Q3LI70 58 aa13.48□□□□□ -0.25
PTF1A-201ENST00000376504 CRCT1Q9UGL9 99 aa13.44□□□□□ -0.26
PTF1A-201ENST00000376504 CDC42SE1Q9NRR8 79 aa13.39□□□□□ -0.27
PTF1A-201ENST00000376504 MT1XP80297 61 aa13.34□□□□□ -0.27
PTF1A-201ENST00000376504 KRTAP10-5P60370 271 aa13.33□□□□□ -0.28
PTF1A-201ENST00000376504 CAMK2N1Q7Z7J9 78 aa13.29□□□□□ -0.28
PTF1A-201ENST00000376504 PRO2289Q9P1D8 64 aa13.18□□□□□ -0.3
PTF1A-201ENST00000376504 KRTAP9-6A0A140TA67 174 aa13.17□□□□□ -0.3
PTF1A-201ENST00000376504 K7ERS5 55 aa13.15□□□□□ -0.3
PTF1A-201ENST00000376504 FCGBPQ9Y6R7 5405 aaPredicted RBP13.14□□□□□ -0.31
PTF1A-201ENST00000376504 BRK1Q8WUW1 75 aa13.1□□□□□ -0.31
PTF1A-201ENST00000376504 C10orf95Q9H7T3 257 aa12.91□□□□□ -0.34
PTF1A-201ENST00000376504 KRTAP10-7P60409 375 aaPredicted RBP12.76□□□□□ -0.37
PTF1A-201ENST00000376504 KRTAP10-12P60413 245 aa12.65□□□□□ -0.38
PTF1A-201ENST00000376504 ROMO1P60602 79 aa12.57□□□□□ -0.4
PTF1A-201ENST00000376504 TNP1P09430 55 aa12.56□□□□□ -0.4
PTF1A-201ENST00000376504 PRO0628Q9UI54 55 aa12.51□□□□□ -0.41
PTF1A-201ENST00000376504 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.49□□□□□ -0.41
PTF1A-201ENST00000376504 MACF1Q9UPN3 7388 aaKnown RBP12.45□□□□□ -0.42
PTF1A-201ENST00000376504 KMT2DO14686 5537 aa12.44□□□□□ -0.42
PTF1A-201ENST00000376504 KRTAP25-1Q3LHN0 102 aa12.42□□□□□ -0.42
PTF1A-201ENST00000376504 KRTAP4-8A0A0G2JLE6 195 aa12.42□□□□□ -0.42
PTF1A-201ENST00000376504 KRTAP4-8Q9BYQ9 185 aa12.42□□□□□ -0.42
PTF1A-201ENST00000376504 PMAIP1Q13794 54 aa12.37□□□□□ -0.43
PTF1A-201ENST00000376504 LCE3AQ5TA76 89 aa12.2□□□□□ -0.46
PTF1A-201ENST00000376504 KRTAP8-1Q8IUC2 63 aa12.19□□□□□ -0.46
PTF1A-201ENST00000376504 SYNE2Q8WXH0 6885 aaKnown RBP12.09□□□□□ -0.47
PTF1A-201ENST00000376504 KRTAP6-3Q3LI67 103 aa12.02□□□□□ -0.48
PTF1A-201ENST00000376504 KRTAP23-1A1A580 65 aa12.01□□□□□ -0.49
PTF1A-201ENST00000376504 KRTAP9-7A8MTY7 169 aa11.97□□□□□ -0.49
PTF1A-201ENST00000376504 KRTAP5-9P26371 169 aa11.97□□□□□ -0.49
PTF1A-201ENST00000376504 KRTAP19-7Q3SYF9 63 aa11.91□□□□□ -0.5
PTF1A-201ENST00000376504 KRTAP19-5Q3LI72 72 aa11.9□□□□□ -0.5
PTF1A-201ENST00000376504 SPRR2FQ96RM1 72 aa11.88□□□□□ -0.51
PTF1A-201ENST00000376504 PP632Q6XCG6 107 aa11.84□□□□□ -0.51
PTF1A-201ENST00000376504 MT1EP04732 61 aa11.73□□□□□ -0.53
PTF1A-201ENST00000376504 KRTAP12-3P60328 96 aa11.7□□□□□ -0.54
PTF1A-201ENST00000376504 PRAC1Q96KF2 57 aa11.7□□□□□ -0.54
PTF1A-201ENST00000376504 MUC12Q9UKN1 5478 aa11.69□□□□□ -0.54
PTF1A-201ENST00000376504 KTN1-AS1Q86SY8 53 aa11.67□□□□□ -0.54
PTF1A-201ENST00000376504 MDN1Q9NU22 5596 aa11.49□□□□□ -0.57
PTF1A-201ENST00000376504 LCE1AQ5T7P2 110 aa11.46□□□□□ -0.57
PTF1A-201ENST00000376504 SPRR2EP22531 72 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms