RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 M0R2T5 61 aa11.17□□□□□ -0.62
HLA-C-202ENST00000376237 ATP5EP56381 51 aaPredicted RBP11.17□□□□□ -0.62
HLA-C-202ENST00000376237 LCE2AQ5TA79 106 aaPredicted RBP11.15□□□□□ -0.62
HLA-C-202ENST00000376237 LCA10Q71F78 164 aa11.15□□□□□ -0.62
HLA-C-202ENST00000376237 CSAG1Q6PB30 78 aa11.07□□□□□ -0.64
HLA-C-202ENST00000376237 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
HLA-C-202ENST00000376237 CHKB-CPT1BH3BT56 60 aa11.06□□□□□ -0.64
HLA-C-202ENST00000376237 COA5Q86WW8 74 aa11.03□□□□□ -0.64
HLA-C-202ENST00000376237 SPTSSBQ8NFR3 76 aa10.99□□□□□ -0.65
HLA-C-202ENST00000376237 KRTAP10-6P60371 365 aaPredicted RBP10.93□□□□□ -0.66
HLA-C-202ENST00000376237 LORP23490 312 aaPredicted RBP10.89□□□□□ -0.67
HLA-C-202ENST00000376237 SERP1Q9Y6X1 66 aa10.82□□□□□ -0.68
HLA-C-202ENST00000376237 KRTAP9-8Q9BYQ0 159 aa10.8□□□□□ -0.68
HLA-C-202ENST00000376237 H0YAA0 97 aa10.79□□□□□ -0.68
HLA-C-202ENST00000376237 KRTAP9-2Q9BYQ4 174 aa10.79□□□□□ -0.68
HLA-C-202ENST00000376237 MT2AP02795 61 aa10.71□□□□□ -0.69
HLA-C-202ENST00000376237 ADM2Q7Z4H4 148 aa10.66□□□□□ -0.7
HLA-C-202ENST00000376237 KRTAP10-10P60014 251 aa10.63□□□□□ -0.71
HLA-C-202ENST00000376237 MT1FP04733 61 aa10.63□□□□□ -0.71
HLA-C-202ENST00000376237 RPS28P62857 69 aaKnown RBP10.63□□□□□ -0.71
HLA-C-202ENST00000376237 SEC61GP60059 68 aa10.58□□□□□ -0.72
HLA-C-202ENST00000376237 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
HLA-C-202ENST00000376237 P0C880 135 aa10.51□□□□□ -0.73
HLA-C-202ENST00000376237 CRIPTQ9P021 101 aa10.5□□□□□ -0.73
HLA-C-202ENST00000376237 SMIM26A0A096LP01 95 aa10.48□□□□□ -0.73
HLA-C-202ENST00000376237 LINC01558Q9Y6Z2 57 aa10.48□□□□□ -0.73
HLA-C-202ENST00000376237 A0A1B0GU69 56 aa10.48□□□□□ -0.73
HLA-C-202ENST00000376237 KRTAP9-6A0A140TA67 174 aa10.44□□□□□ -0.74
HLA-C-202ENST00000376237 LCE2DQ5TA82 110 aaPredicted RBP10.44□□□□□ -0.74
HLA-C-202ENST00000376237 V9GYY9 64 aa10.43□□□□□ -0.74
HLA-C-202ENST00000376237 KRTAP9-3Q9BYQ3 159 aa10.43□□□□□ -0.74
HLA-C-202ENST00000376237 PRR15LQ9BU68 103 aa10.42□□□□□ -0.74
HLA-C-202ENST00000376237 Q1T7F1 81 aa10.38□□□□□ -0.75
HLA-C-202ENST00000376237 R4GN34 69 aa10.36□□□□□ -0.75
HLA-C-202ENST00000376237 SPRR2GQ9BYE4 73 aa10.33□□□□□ -0.76
HLA-C-202ENST00000376237 FSIP2Q5CZC0 6907 aa10.31□□□□□ -0.76
HLA-C-202ENST00000376237 M0QZ58 72 aa10.3□□□□□ -0.76
HLA-C-202ENST00000376237 KRTAP19-1Q8IUB9 90 aa10.3□□□□□ -0.76
HLA-C-202ENST00000376237 A0A1B0GU33 70 aa10.29□□□□□ -0.76
HLA-C-202ENST00000376237 CRCT1Q9UGL9 99 aa10.19□□□□□ -0.78
HLA-C-202ENST00000376237 LCE2BO14633 110 aa10.18□□□□□ -0.78
HLA-C-202ENST00000376237 PSPHP1O15172 72 aa10.17□□□□□ -0.78
HLA-C-202ENST00000376237 Q5VV11 94 aa10.17□□□□□ -0.78
HLA-C-202ENST00000376237 KRTAP13-4Q3LI77 160 aa10.14□□□□□ -0.79
HLA-C-202ENST00000376237 KRTAP19-8Q3LI54 63 aa10.12□□□□□ -0.79
HLA-C-202ENST00000376237 UQCR11O14957 56 aa10.09□□□□□ -0.79
HLA-C-202ENST00000376237 LINC01554Q52M75 96 aa10.08□□□□□ -0.8
HLA-C-202ENST00000376237 SPATA8Q6RVD6 105 aa10.08□□□□□ -0.8
HLA-C-202ENST00000376237 A6NN06 94 aa9.97□□□□□ -0.81
HLA-C-202ENST00000376237 MT1BP07438 61 aa9.97□□□□□ -0.81
HLA-C-202ENST00000376237 A0A0D9SG42 100 aa9.93□□□□□ -0.82
HLA-C-202ENST00000376237 MIR22HGQ0VDD5 57 aa9.92□□□□□ -0.82
HLA-C-202ENST00000376237 PLAC4Q8WY50 150 aa9.92□□□□□ -0.82
HLA-C-202ENST00000376237 A6NED7 52 aa9.9□□□□□ -0.82
HLA-C-202ENST00000376237 USH2AO75445 5202 aa9.87□□□□□ -0.83
HLA-C-202ENST00000376237 A8MU10 97 aa9.87□□□□□ -0.83
HLA-C-202ENST00000376237 KRTAP12-1P59990 96 aa9.77□□□□□ -0.85
HLA-C-202ENST00000376237 SPINT4Q6UDR6 99 aa9.76□□□□□ -0.85
HLA-C-202ENST00000376237 KRTAP19-6Q3LI70 58 aa9.72□□□□□ -0.85
HLA-C-202ENST00000376237 KRTAP12-2P59991 146 aa9.7□□□□□ -0.86
HLA-C-202ENST00000376237 SSPOA2VEC9 5147 aa9.7□□□□□ -0.86
HLA-C-202ENST00000376237 CDC42SE1Q9NRR8 79 aa9.67□□□□□ -0.86
HLA-C-202ENST00000376237 CAMK2N1Q7Z7J9 78 aa9.65□□□□□ -0.86
HLA-C-202ENST00000376237 PRO2289Q9P1D8 64 aa9.61□□□□□ -0.87
HLA-C-202ENST00000376237 K7ERS5 55 aa9.61□□□□□ -0.87
HLA-C-202ENST00000376237 KRTAP10-5P60370 271 aa9.6□□□□□ -0.87
HLA-C-202ENST00000376237 MT1XP80297 61 aa9.56□□□□□ -0.88
HLA-C-202ENST00000376237 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.5□□□□□ -0.89
HLA-C-202ENST00000376237 BRK1Q8WUW1 75 aa9.45□□□□□ -0.9
HLA-C-202ENST00000376237 FCGBPQ9Y6R7 5405 aaPredicted RBP9.44□□□□□ -0.9
HLA-C-202ENST00000376237 KRTAP9-7A8MTY7 169 aa9.39□□□□□ -0.91
HLA-C-202ENST00000376237 C10orf95Q9H7T3 257 aa9.25□□□□□ -0.93
HLA-C-202ENST00000376237 MACF1Q9UPN3 7388 aaKnown RBP9.22□□□□□ -0.93
HLA-C-202ENST00000376237 KRTAP10-7P60409 375 aaPredicted RBP9.13□□□□□ -0.95
HLA-C-202ENST00000376237 TNP1P09430 55 aa9.12□□□□□ -0.95
HLA-C-202ENST00000376237 KRTAP10-12P60413 245 aa9.1□□□□□ -0.95
HLA-C-202ENST00000376237 SYNE2Q8WXH0 6885 aaKnown RBP9.1□□□□□ -0.95
HLA-C-202ENST00000376237 ROMO1P60602 79 aa9.09□□□□□ -0.95
HLA-C-202ENST00000376237 PRO0628Q9UI54 55 aa9.04□□□□□ -0.96
HLA-C-202ENST00000376237 KRTAP25-1Q3LHN0 102 aa9.01□□□□□ -0.97
HLA-C-202ENST00000376237 PMAIP1Q13794 54 aa8.95□□□□□ -0.98
HLA-C-202ENST00000376237 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
HLA-C-202ENST00000376237 KRTAP4-8Q9BYQ9 185 aa8.88□□□□□ -0.99
HLA-C-202ENST00000376237 KRTAP6-3Q3LI67 103 aa8.85□□□□□ -0.99
HLA-C-202ENST00000376237 KRTAP8-1Q8IUC2 63 aa8.81□□□□□ -1
HLA-C-202ENST00000376237 KRTAP23-1A1A580 65 aa8.75□□□□□ -1.01
HLA-C-202ENST00000376237 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
HLA-C-202ENST00000376237 KMT2DO14686 5537 aa8.74□□□□□ -1.01
HLA-C-202ENST00000376237 KRTAP5-9P26371 169 aa8.64□□□□□ -1.03
HLA-C-202ENST00000376237 PP632Q6XCG6 107 aa8.64□□□□□ -1.03
HLA-C-202ENST00000376237 SPRR2FQ96RM1 72 aa8.56□□□□□ -1.04
HLA-C-202ENST00000376237 MUC12Q9UKN1 5478 aa8.55□□□□□ -1.04
HLA-C-202ENST00000376237 KRTAP19-7Q3SYF9 63 aa8.54□□□□□ -1.04
HLA-C-202ENST00000376237 KRTAP19-5Q3LI72 72 aa8.53□□□□□ -1.04
HLA-C-202ENST00000376237 NEBP20929 6669 aa8.49□□□□□ -1.05
HLA-C-202ENST00000376237 KRTAP12-3P60328 96 aa8.44□□□□□ -1.06
HLA-C-202ENST00000376237 KTN1-AS1Q86SY8 53 aa8.43□□□□□ -1.06
HLA-C-202ENST00000376237 MT1EP04732 61 aa8.42□□□□□ -1.06
HLA-C-202ENST00000376237 PRAC1Q96KF2 57 aa8.34□□□□□ -1.07
HLA-C-202ENST00000376237 MDN1Q9NU22 5596 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms