RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 ATOX1O00244 68 aa8.21□□□□□ -1.1
H2AFX-201ENST00000375167 C7orf65Q6ZTY9 151 aa8.21□□□□□ -1.1
H2AFX-201ENST00000375167 ANAPC13Q9BS18 74 aa8.21□□□□□ -1.1
H2AFX-201ENST00000375167 UQCRQO14949 82 aa8.2□□□□□ -1.1
H2AFX-201ENST00000375167 TRAV22A0A0B4J277 110 aa8.18□□□□□ -1.1
H2AFX-201ENST00000375167 IGKV2D-30A0A075B6S6 120 aa8.15□□□□□ -1.1
H2AFX-201ENST00000375167 IGKV2-30P06310 120 aa8.15□□□□□ -1.1
H2AFX-201ENST00000375167 Q5W150 140 aa8.15□□□□□ -1.1
H2AFX-201ENST00000375167 SPRR2EP22531 72 aa8.14□□□□□ -1.11
H2AFX-201ENST00000375167 SPRR2BP35325 72 aa8.14□□□□□ -1.11
H2AFX-201ENST00000375167 SPRR2AP35326 72 aa8.14□□□□□ -1.11
H2AFX-201ENST00000375167 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
H2AFX-201ENST00000375167 MP68P56378 58 aa8.11□□□□□ -1.11
H2AFX-201ENST00000375167 LOC101927531A0A1B0GV80 90 aa8.1□□□□□ -1.11
H2AFX-201ENST00000375167 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
H2AFX-201ENST00000375167 COX7CP15954 63 aa8.09□□□□□ -1.12
H2AFX-201ENST00000375167 C5orf47Q569G3 176 aa8.09□□□□□ -1.12
H2AFX-201ENST00000375167 H0Y9P7 68 aa8.08□□□□□ -1.12
H2AFX-201ENST00000375167 OCR1Q9BZK8 76 aa8.08□□□□□ -1.12
H2AFX-201ENST00000375167 TRAV7A0A075B6U4 112 aa8.07□□□□□ -1.12
H2AFX-201ENST00000375167 H3BPC8 53 aa8.05□□□□□ -1.12
H2AFX-201ENST00000375167 CCDC179H3BU77 68 aa8.04□□□□□ -1.12
H2AFX-201ENST00000375167 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
H2AFX-201ENST00000375167 SPRR2FQ96RM1 72 aa8.02□□□□□ -1.13
H2AFX-201ENST00000375167 C1orf64Q8NEQ6 169 aa8□□□□□ -1.13
H2AFX-201ENST00000375167 CYP4F30PQ9H0H9 118 aa8□□□□□ -1.13
H2AFX-201ENST00000375167 MT1BP07438 61 aa7.98□□□□□ -1.13
H2AFX-201ENST00000375167 Q5VV11 94 aa7.98□□□□□ -1.13
H2AFX-201ENST00000375167 LINC00208Q96KT6 92 aa7.98□□□□□ -1.13
H2AFX-201ENST00000375167 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
H2AFX-201ENST00000375167 C4orf26Q17RF5 130 aa7.93□□□□□ -1.14
H2AFX-201ENST00000375167 KLKP1Q107X0 134 aa7.92□□□□□ -1.14
H2AFX-201ENST00000375167 SPRR2DP22532 72 aa7.89□□□□□ -1.15
H2AFX-201ENST00000375167 C20orf197Q8N268 126 aa7.89□□□□□ -1.15
H2AFX-201ENST00000375167 CYSTM1Q9H1C7 97 aa7.88□□□□□ -1.15
H2AFX-201ENST00000375167 LCE1AQ5T7P2 110 aa7.86□□□□□ -1.15
H2AFX-201ENST00000375167 A8MUN3 132 aa7.84□□□□□ -1.15
H2AFX-201ENST00000375167 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
H2AFX-201ENST00000375167 H7BZZ5 65 aa7.81□□□□□ -1.16
H2AFX-201ENST00000375167 NDUFC1O43677 76 aa7.81□□□□□ -1.16
H2AFX-201ENST00000375167 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
H2AFX-201ENST00000375167 SNURFQ9Y675 71 aa7.81□□□□□ -1.16
H2AFX-201ENST00000375167 TMEM258P61165 79 aa7.79□□□□□ -1.16
H2AFX-201ENST00000375167 LCE3BQ5TA77 95 aa7.75□□□□□ -1.17
H2AFX-201ENST00000375167 S4R3F8 94 aa7.75□□□□□ -1.17
H2AFX-201ENST00000375167 SPRR2GQ9BYE4 73 aa7.71□□□□□ -1.18
H2AFX-201ENST00000375167 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
H2AFX-201ENST00000375167 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
H2AFX-201ENST00000375167 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
H2AFX-201ENST00000375167 LCA10Q71F78 164 aa7.66□□□□□ -1.18
H2AFX-201ENST00000375167 KRTAP8-1Q8IUC2 63 aa7.66□□□□□ -1.18
H2AFX-201ENST00000375167 SPANXA2-OT1Q8N9U9 137 aa7.66□□□□□ -1.18
H2AFX-201ENST00000375167 ACYP2P14621 99 aa7.64□□□□□ -1.19
H2AFX-201ENST00000375167 RPS28P62857 69 aaKnown RBP7.59□□□□□ -1.19
H2AFX-201ENST00000375167 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
H2AFX-201ENST00000375167 DSTQ03001 7570 aaKnown RBP7.57□□□□□ -1.2
H2AFX-201ENST00000375167 SPTSSBQ8NFR3 76 aa7.56□□□□□ -1.2
H2AFX-201ENST00000375167 SERP1Q9Y6X1 66 aa7.54□□□□□ -1.2
H2AFX-201ENST00000375167 CHKB-CPT1BH3BT56 60 aa7.53□□□□□ -1.2
H2AFX-201ENST00000375167 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
H2AFX-201ENST00000375167 H0YAA0 97 aa7.44□□□□□ -1.22
H2AFX-201ENST00000375167 PRO2289Q9P1D8 64 aa7.4□□□□□ -1.22
H2AFX-201ENST00000375167 COA5Q86WW8 74 aa7.35□□□□□ -1.23
H2AFX-201ENST00000375167 CRIPTQ9P021 101 aa7.35□□□□□ -1.23
H2AFX-201ENST00000375167 SMIM26A0A096LP01 95 aa7.33□□□□□ -1.24
H2AFX-201ENST00000375167 ADM2Q7Z4H4 148 aa7.31□□□□□ -1.24
H2AFX-201ENST00000375167 KRTAP12-2P59991 146 aa7.29□□□□□ -1.24
H2AFX-201ENST00000375167 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
H2AFX-201ENST00000375167 HMCN1Q96RW7 5635 aa7.25□□□□□ -1.25
H2AFX-201ENST00000375167 MT1XP80297 61 aa7.25□□□□□ -1.25
H2AFX-201ENST00000375167 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
H2AFX-201ENST00000375167 SEC61GP60059 68 aa7.24□□□□□ -1.25
H2AFX-201ENST00000375167 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
H2AFX-201ENST00000375167 AHNAK2Q8IVF2 5795 aa7.24□□□□□ -1.25
H2AFX-201ENST00000375167 Q1T7F1 81 aa7.2□□□□□ -1.26
H2AFX-201ENST00000375167 R4GN34 69 aa7.18□□□□□ -1.26
H2AFX-201ENST00000375167 LCE1DQ5T752 114 aa7.17□□□□□ -1.26
H2AFX-201ENST00000375167 KRTAP5-10Q6L8G5 202 aa7.17□□□□□ -1.26
H2AFX-201ENST00000375167 V9GYY9 64 aa7.15□□□□□ -1.26
H2AFX-201ENST00000375167 P0C880 135 aa7.14□□□□□ -1.27
H2AFX-201ENST00000375167 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
H2AFX-201ENST00000375167 M0QZ58 72 aa7.08□□□□□ -1.28
H2AFX-201ENST00000375167 A0A1B0GU69 56 aa7.06□□□□□ -1.28
H2AFX-201ENST00000375167 PRR15LQ9BU68 103 aa7.06□□□□□ -1.28
H2AFX-201ENST00000375167 KRTAP5-7Q6L8G8 165 aa7.04□□□□□ -1.28
H2AFX-201ENST00000375167 PLAC4Q8WY50 150 aa7.01□□□□□ -1.29
H2AFX-201ENST00000375167 PSPHP1O15172 72 aa6.98□□□□□ -1.29
H2AFX-201ENST00000375167 MT4P47944 62 aa6.98□□□□□ -1.29
H2AFX-201ENST00000375167 A0A1B0GU33 70 aa6.95□□□□□ -1.3
H2AFX-201ENST00000375167 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
H2AFX-201ENST00000375167 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
H2AFX-201ENST00000375167 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.31
H2AFX-201ENST00000375167 LCE4AQ5TA78 99 aa6.89□□□□□ -1.31
H2AFX-201ENST00000375167 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
H2AFX-201ENST00000375167 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
H2AFX-201ENST00000375167 A6NED7 52 aa6.77□□□□□ -1.33
H2AFX-201ENST00000375167 UQCR11O14957 56 aa6.77□□□□□ -1.33
H2AFX-201ENST00000375167 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
H2AFX-201ENST00000375167 KRTAP5-3Q6L8H2 238 aa6.77□□□□□ -1.33
H2AFX-201ENST00000375167 SPATA8Q6RVD6 105 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms