RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 M0R2T5 61 aa6.79□□□□□ -1.32
TCEA3-201ENST00000374601 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
TCEA3-201ENST00000374601 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
TCEA3-201ENST00000374601 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
TCEA3-201ENST00000374601 ACYP2P14621 99 aa6.74□□□□□ -1.33
TCEA3-201ENST00000374601 PCP4P48539 62 aa6.74□□□□□ -1.33
TCEA3-201ENST00000374601 KRTAP10-6P60371 365 aaPredicted RBP6.74□□□□□ -1.33
TCEA3-201ENST00000374601 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
TCEA3-201ENST00000374601 CSAG1Q6PB30 78 aa6.68□□□□□ -1.34
TCEA3-201ENST00000374601 TMEM258P61165 79 aa6.67□□□□□ -1.34
TCEA3-201ENST00000374601 ATP5EP56381 51 aaPredicted RBP6.66□□□□□ -1.34
TCEA3-201ENST00000374601 COA5Q86WW8 74 aa6.65□□□□□ -1.34
TCEA3-201ENST00000374601 KRTAP9-8Q9BYQ0 159 aa6.65□□□□□ -1.34
TCEA3-201ENST00000374601 CHKB-CPT1BH3BT56 60 aa6.62□□□□□ -1.35
TCEA3-201ENST00000374601 MT2AP02795 61 aa6.61□□□□□ -1.35
TCEA3-201ENST00000374601 MT1FP04733 61 aa6.57□□□□□ -1.36
TCEA3-201ENST00000374601 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
TCEA3-201ENST00000374601 SPTSSBQ8NFR3 76 aa6.55□□□□□ -1.36
TCEA3-201ENST00000374601 KRTAP9-7A8MTY7 169 aa6.54□□□□□ -1.36
TCEA3-201ENST00000374601 H0YAA0 97 aa6.52□□□□□ -1.37
TCEA3-201ENST00000374601 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
TCEA3-201ENST00000374601 ADM2Q7Z4H4 148 aa6.47□□□□□ -1.37
TCEA3-201ENST00000374601 SERP1Q9Y6X1 66 aa6.47□□□□□ -1.37
TCEA3-201ENST00000374601 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.38
TCEA3-201ENST00000374601 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
TCEA3-201ENST00000374601 P0C880 135 aa6.42□□□□□ -1.38
TCEA3-201ENST00000374601 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
TCEA3-201ENST00000374601 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.39
TCEA3-201ENST00000374601 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
TCEA3-201ENST00000374601 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
TCEA3-201ENST00000374601 LCE2BO14633 110 aa6.3□□□□□ -1.4
TCEA3-201ENST00000374601 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
TCEA3-201ENST00000374601 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
TCEA3-201ENST00000374601 SEC61GP60059 68 aa6.28□□□□□ -1.4
TCEA3-201ENST00000374601 A0A1B0GU69 56 aa6.27□□□□□ -1.41
TCEA3-201ENST00000374601 SMIM26A0A096LP01 95 aa6.24□□□□□ -1.41
TCEA3-201ENST00000374601 M0QZ58 72 aa6.24□□□□□ -1.41
TCEA3-201ENST00000374601 R4GN34 69 aa6.24□□□□□ -1.41
TCEA3-201ENST00000374601 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
TCEA3-201ENST00000374601 Q1T7F1 81 aa6.2□□□□□ -1.42
TCEA3-201ENST00000374601 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
TCEA3-201ENST00000374601 PRR15LQ9BU68 103 aa6.19□□□□□ -1.42
TCEA3-201ENST00000374601 A0A1B0GU33 70 aa6.18□□□□□ -1.42
TCEA3-201ENST00000374601 V9GYY9 64 aa6.18□□□□□ -1.42
TCEA3-201ENST00000374601 MT1BP07438 61 aa6.16□□□□□ -1.42
TCEA3-201ENST00000374601 USH2AO75445 5202 aa6.13□□□□□ -1.43
TCEA3-201ENST00000374601 Q5VV11 94 aa6.13□□□□□ -1.43
TCEA3-201ENST00000374601 SPATA8Q6RVD6 105 aa6.12□□□□□ -1.43
TCEA3-201ENST00000374601 PSPHP1O15172 72 aa6.11□□□□□ -1.43
TCEA3-201ENST00000374601 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
TCEA3-201ENST00000374601 A0A0D9SG42 100 aa6.02□□□□□ -1.45
TCEA3-201ENST00000374601 A6NN06 94 aa6.02□□□□□ -1.45
TCEA3-201ENST00000374601 UQCR11O14957 56 aa6.01□□□□□ -1.45
TCEA3-201ENST00000374601 A8MU10 97 aa5.99□□□□□ -1.45
TCEA3-201ENST00000374601 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
TCEA3-201ENST00000374601 KRTAP19-6Q3LI70 58 aa5.98□□□□□ -1.45
TCEA3-201ENST00000374601 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
TCEA3-201ENST00000374601 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
TCEA3-201ENST00000374601 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
TCEA3-201ENST00000374601 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
TCEA3-201ENST00000374601 A6NED7 52 aa5.91□□□□□ -1.46
TCEA3-201ENST00000374601 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
TCEA3-201ENST00000374601 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
TCEA3-201ENST00000374601 MT1XP80297 61 aa5.89□□□□□ -1.47
TCEA3-201ENST00000374601 SPINT4Q6UDR6 99 aa5.88□□□□□ -1.47
TCEA3-201ENST00000374601 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
TCEA3-201ENST00000374601 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
TCEA3-201ENST00000374601 CAMK2N1Q7Z7J9 78 aa5.8□□□□□ -1.48
TCEA3-201ENST00000374601 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
TCEA3-201ENST00000374601 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
TCEA3-201ENST00000374601 K7ERS5 55 aa5.68□□□□□ -1.5
TCEA3-201ENST00000374601 KRTAP20-1Q3LI63 56 aa5.65□□□□□ -1.5
TCEA3-201ENST00000374601 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.5
TCEA3-201ENST00000374601 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
TCEA3-201ENST00000374601 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
TCEA3-201ENST00000374601 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
TCEA3-201ENST00000374601 NEBP20929 6669 aa5.61□□□□□ -1.51
TCEA3-201ENST00000374601 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
TCEA3-201ENST00000374601 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
TCEA3-201ENST00000374601 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
TCEA3-201ENST00000374601 TNP1P09430 55 aa5.47□□□□□ -1.53
TCEA3-201ENST00000374601 ROMO1P60602 79 aa5.44□□□□□ -1.54
TCEA3-201ENST00000374601 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
TCEA3-201ENST00000374601 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
TCEA3-201ENST00000374601 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
TCEA3-201ENST00000374601 KMT2DO14686 5537 aa5.38□□□□□ -1.55
TCEA3-201ENST00000374601 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
TCEA3-201ENST00000374601 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
TCEA3-201ENST00000374601 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
TCEA3-201ENST00000374601 PMAIP1Q13794 54 aa5.29□□□□□ -1.56
TCEA3-201ENST00000374601 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
TCEA3-201ENST00000374601 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
TCEA3-201ENST00000374601 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
TCEA3-201ENST00000374601 KRTAP2-4Q9BYR9 128 aa5.25□□□□□ -1.57
TCEA3-201ENST00000374601 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
TCEA3-201ENST00000374601 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
TCEA3-201ENST00000374601 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.57
TCEA3-201ENST00000374601 MT1EP04732 61 aa5.18□□□□□ -1.58
TCEA3-201ENST00000374601 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
TCEA3-201ENST00000374601 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms