RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 SERP2Q8N6R1 65 aa7.03□□□□□ -1.28
CDKN1A-202ENST00000373711 LINC00208Q96KT6 92 aa7.03□□□□□ -1.28
CDKN1A-202ENST00000373711 MP68P56378 58 aa7.02□□□□□ -1.29
CDKN1A-202ENST00000373711 C7orf65Q6ZTY9 151 aa7.02□□□□□ -1.29
CDKN1A-202ENST00000373711 C1orf64Q8NEQ6 169 aa7.01□□□□□ -1.29
CDKN1A-202ENST00000373711 CYP4F30PQ9H0H9 118 aa7.01□□□□□ -1.29
CDKN1A-202ENST00000373711 LOC101927531A0A1B0GV80 90 aa7□□□□□ -1.29
CDKN1A-202ENST00000373711 H3BPC8 53 aa6.98□□□□□ -1.29
CDKN1A-202ENST00000373711 COX7CP15954 63 aa6.97□□□□□ -1.29
CDKN1A-202ENST00000373711 ANAPC13Q9BS18 74 aa6.96□□□□□ -1.3
CDKN1A-202ENST00000373711 A6NN06 94 aa6.95□□□□□ -1.3
CDKN1A-202ENST00000373711 KLKP1Q107X0 134 aa6.95□□□□□ -1.3
CDKN1A-202ENST00000373711 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
CDKN1A-202ENST00000373711 SNURFQ9Y675 71 aa6.93□□□□□ -1.3
CDKN1A-202ENST00000373711 C4orf26Q17RF5 130 aa6.9□□□□□ -1.3
CDKN1A-202ENST00000373711 H1FX-AS1Q4G0G2 97 aa6.87□□□□□ -1.31
CDKN1A-202ENST00000373711 CCDC179H3BU77 68 aa6.86□□□□□ -1.31
CDKN1A-202ENST00000373711 KRTAP3-1Q9BYR8 98 aa6.85□□□□□ -1.31
CDKN1A-202ENST00000373711 KRTAP5-9P26371 169 aa6.84□□□□□ -1.31
CDKN1A-202ENST00000373711 CYSTM1Q9H1C7 97 aa6.84□□□□□ -1.31
CDKN1A-202ENST00000373711 MDN1Q9NU22 5596 aa6.81□□□□□ -1.32
CDKN1A-202ENST00000373711 Q5VV11 94 aa6.79□□□□□ -1.32
CDKN1A-202ENST00000373711 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
CDKN1A-202ENST00000373711 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
CDKN1A-202ENST00000373711 KMT2DO14686 5537 aa6.77□□□□□ -1.33
CDKN1A-202ENST00000373711 H7BZZ5 65 aa6.76□□□□□ -1.33
CDKN1A-202ENST00000373711 NDUFC1O43677 76 aa6.73□□□□□ -1.33
CDKN1A-202ENST00000373711 MT1BP07438 61 aa6.73□□□□□ -1.33
CDKN1A-202ENST00000373711 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
CDKN1A-202ENST00000373711 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
CDKN1A-202ENST00000373711 DMAC1Q96GE9 116 aa6.71□□□□□ -1.34
CDKN1A-202ENST00000373711 PCP4P48539 62 aa6.7□□□□□ -1.34
CDKN1A-202ENST00000373711 A8MUN3 132 aa6.69□□□□□ -1.34
CDKN1A-202ENST00000373711 KRTAP19-8Q3LI54 63 aa6.68□□□□□ -1.34
CDKN1A-202ENST00000373711 SPRR2GQ9BYE4 73 aa6.64□□□□□ -1.35
CDKN1A-202ENST00000373711 S4R3F8 94 aa6.64□□□□□ -1.35
CDKN1A-202ENST00000373711 ACYP2P14621 99 aa6.63□□□□□ -1.35
CDKN1A-202ENST00000373711 LCA10Q71F78 164 aa6.63□□□□□ -1.35
CDKN1A-202ENST00000373711 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
CDKN1A-202ENST00000373711 SPRR2EP22531 72 aa6.57□□□□□ -1.36
CDKN1A-202ENST00000373711 SPRR2BP35325 72 aa6.57□□□□□ -1.36
CDKN1A-202ENST00000373711 SPRR2AP35326 72 aa6.57□□□□□ -1.36
CDKN1A-202ENST00000373711 TMEM258P61165 79 aa6.56□□□□□ -1.36
CDKN1A-202ENST00000373711 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
CDKN1A-202ENST00000373711 SPRR2FQ96RM1 72 aa6.54□□□□□ -1.36
CDKN1A-202ENST00000373711 KRTAP2-2Q9BYT5 123 aa6.54□□□□□ -1.36
CDKN1A-202ENST00000373711 KRTAP2-1Q9BYU5 128 aa6.54□□□□□ -1.36
CDKN1A-202ENST00000373711 COA5Q86WW8 74 aa6.53□□□□□ -1.36
CDKN1A-202ENST00000373711 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
CDKN1A-202ENST00000373711 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
CDKN1A-202ENST00000373711 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
CDKN1A-202ENST00000373711 SPTSSBQ8NFR3 76 aa6.41□□□□□ -1.38
CDKN1A-202ENST00000373711 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
CDKN1A-202ENST00000373711 SERP1Q9Y6X1 66 aa6.37□□□□□ -1.39
CDKN1A-202ENST00000373711 SPRR2DP22532 72 aa6.36□□□□□ -1.39
CDKN1A-202ENST00000373711 LCE1AQ5T7P2 110 aa6.36□□□□□ -1.39
CDKN1A-202ENST00000373711 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
CDKN1A-202ENST00000373711 H0YAA0 97 aa6.34□□□□□ -1.39
CDKN1A-202ENST00000373711 ADM2Q7Z4H4 148 aa6.33□□□□□ -1.4
CDKN1A-202ENST00000373711 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
CDKN1A-202ENST00000373711 P0C880 135 aa6.27□□□□□ -1.41
CDKN1A-202ENST00000373711 RPS28P62857 69 aaKnown RBP6.24□□□□□ -1.41
CDKN1A-202ENST00000373711 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
CDKN1A-202ENST00000373711 KRTAP12-2P59991 146 aa6.21□□□□□ -1.42
CDKN1A-202ENST00000373711 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
CDKN1A-202ENST00000373711 MT1XP80297 61 aa6.19□□□□□ -1.42
CDKN1A-202ENST00000373711 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
CDKN1A-202ENST00000373711 GPR98Q8WXG9 6306 aa6.17□□□□□ -1.42
CDKN1A-202ENST00000373711 SMIM26A0A096LP01 95 aa6.17□□□□□ -1.42
CDKN1A-202ENST00000373711 SEC61GP60059 68 aa6.17□□□□□ -1.42
CDKN1A-202ENST00000373711 A0A1B0GU69 56 aa6.16□□□□□ -1.42
CDKN1A-202ENST00000373711 Q1T7F1 81 aa6.12□□□□□ -1.43
CDKN1A-202ENST00000373711 R4GN34 69 aa6.09□□□□□ -1.43
CDKN1A-202ENST00000373711 M0QZ58 72 aa6.08□□□□□ -1.44
CDKN1A-202ENST00000373711 PRR15LQ9BU68 103 aa6.08□□□□□ -1.44
CDKN1A-202ENST00000373711 V9GYY9 64 aa6.08□□□□□ -1.44
CDKN1A-202ENST00000373711 A0A1B0GU33 70 aa6.07□□□□□ -1.44
CDKN1A-202ENST00000373711 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
CDKN1A-202ENST00000373711 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
CDKN1A-202ENST00000373711 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
CDKN1A-202ENST00000373711 PSPHP1O15172 72 aa6.03□□□□□ -1.44
CDKN1A-202ENST00000373711 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
CDKN1A-202ENST00000373711 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
CDKN1A-202ENST00000373711 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
CDKN1A-202ENST00000373711 UQCR11O14957 56 aa5.91□□□□□ -1.46
CDKN1A-202ENST00000373711 A0A0D9SG42 100 aa5.9□□□□□ -1.46
CDKN1A-202ENST00000373711 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
CDKN1A-202ENST00000373711 A8MU10 97 aa5.89□□□□□ -1.47
CDKN1A-202ENST00000373711 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
CDKN1A-202ENST00000373711 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
CDKN1A-202ENST00000373711 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
CDKN1A-202ENST00000373711 A6NED7 52 aa5.82□□□□□ -1.48
CDKN1A-202ENST00000373711 KRTAP12-1P59990 96 aa5.81□□□□□ -1.48
CDKN1A-202ENST00000373711 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
CDKN1A-202ENST00000373711 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
CDKN1A-202ENST00000373711 CDC42SE1Q9NRR8 79 aa5.69□□□□□ -1.5
CDKN1A-202ENST00000373711 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
CDKN1A-202ENST00000373711 CAMK2N1Q7Z7J9 78 aa5.66□□□□□ -1.5
CDKN1A-202ENST00000373711 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
CDKN1A-202ENST00000373711 HMCN1Q96RW7 5635 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms