RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SPANXA2-OT1Q8N9U9 137 aa8.22□□□□□ -1.09
TMEM53-203ENST00000372242 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
TMEM53-203ENST00000372242 M0R2T5 61 aa8.11□□□□□ -1.11
TMEM53-203ENST00000372242 FLGP20930 4061 aaPredicted RBP8.11□□□□□ -1.11
TMEM53-203ENST00000372242 PSPHP1O15172 72 aa8.1□□□□□ -1.11
TMEM53-203ENST00000372242 A8MUN3 132 aa8.07□□□□□ -1.12
TMEM53-203ENST00000372242 Q5VV11 94 aa8.06□□□□□ -1.12
TMEM53-203ENST00000372242 PMAIP1Q13794 54 aa8.04□□□□□ -1.12
TMEM53-203ENST00000372242 H1FX-AS1Q4G0G2 97 aa8.03□□□□□ -1.12
TMEM53-203ENST00000372242 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
TMEM53-203ENST00000372242 KRTAP10-6P60371 365 aaPredicted RBP7.99□□□□□ -1.13
TMEM53-203ENST00000372242 COA5Q86WW8 74 aa7.99□□□□□ -1.13
TMEM53-203ENST00000372242 SEC61GP60059 68 aa7.98□□□□□ -1.13
TMEM53-203ENST00000372242 CHKB-CPT1BH3BT56 60 aa7.97□□□□□ -1.13
TMEM53-203ENST00000372242 PRR15LQ9BU68 103 aa7.97□□□□□ -1.13
TMEM53-203ENST00000372242 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.13
TMEM53-203ENST00000372242 LINC01558Q9Y6Z2 57 aa7.92□□□□□ -1.14
TMEM53-203ENST00000372242 A6NED7 52 aa7.86□□□□□ -1.15
TMEM53-203ENST00000372242 S4R3F8 94 aa7.86□□□□□ -1.15
TMEM53-203ENST00000372242 LCA10Q71F78 164 aa7.85□□□□□ -1.15
TMEM53-203ENST00000372242 CDC42SE1Q9NRR8 79 aa7.85□□□□□ -1.15
TMEM53-203ENST00000372242 A8MU10 97 aa7.85□□□□□ -1.15
TMEM53-203ENST00000372242 KRTAP9-8Q9BYQ0 159 aa7.85□□□□□ -1.15
TMEM53-203ENST00000372242 KTN1-AS1Q86SY8 53 aa7.82□□□□□ -1.16
TMEM53-203ENST00000372242 DMAC1Q96GE9 116 aa7.8□□□□□ -1.16
TMEM53-203ENST00000372242 SPTSSBQ8NFR3 76 aa7.78□□□□□ -1.16
TMEM53-203ENST00000372242 A6NN06 94 aa7.78□□□□□ -1.16
TMEM53-203ENST00000372242 MT2AP02795 61 aa7.78□□□□□ -1.16
TMEM53-203ENST00000372242 ACYP2P14621 99 aa7.78□□□□□ -1.16
TMEM53-203ENST00000372242 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
TMEM53-203ENST00000372242 CSAG1Q6PB30 78 aa7.73□□□□□ -1.17
TMEM53-203ENST00000372242 MT1FP04733 61 aa7.73□□□□□ -1.17
TMEM53-203ENST00000372242 KRTAP10-10P60014 251 aa7.71□□□□□ -1.18
TMEM53-203ENST00000372242 KRTAP9-2Q9BYQ4 174 aa7.69□□□□□ -1.18
TMEM53-203ENST00000372242 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
TMEM53-203ENST00000372242 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
TMEM53-203ENST00000372242 A0A1B0GU69 56 aa7.53□□□□□ -1.2
TMEM53-203ENST00000372242 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.2
TMEM53-203ENST00000372242 H0YAA0 97 aa7.48□□□□□ -1.21
TMEM53-203ENST00000372242 LCE2BO14633 110 aa7.47□□□□□ -1.21
TMEM53-203ENST00000372242 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
TMEM53-203ENST00000372242 ADM2Q7Z4H4 148 aa7.46□□□□□ -1.21
TMEM53-203ENST00000372242 UQCR11O14957 56 aa7.45□□□□□ -1.22
TMEM53-203ENST00000372242 MIR22HGQ0VDD5 57 aa7.43□□□□□ -1.22
TMEM53-203ENST00000372242 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
TMEM53-203ENST00000372242 USH2AO75445 5202 aa7.38□□□□□ -1.23
TMEM53-203ENST00000372242 P0C880 135 aa7.36□□□□□ -1.23
TMEM53-203ENST00000372242 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
TMEM53-203ENST00000372242 SPRR2GQ9BYE4 73 aa7.34□□□□□ -1.24
TMEM53-203ENST00000372242 CRCT1Q9UGL9 99 aa7.33□□□□□ -1.24
TMEM53-203ENST00000372242 PRAC1Q96KF2 57 aa7.32□□□□□ -1.24
TMEM53-203ENST00000372242 CRIPTQ9P021 101 aa7.32□□□□□ -1.24
TMEM53-203ENST00000372242 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
TMEM53-203ENST00000372242 LINC01554Q52M75 96 aa7.26□□□□□ -1.25
TMEM53-203ENST00000372242 R4GN34 69 aa7.22□□□□□ -1.25
TMEM53-203ENST00000372242 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
TMEM53-203ENST00000372242 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
TMEM53-203ENST00000372242 M0QZ58 72 aa7.2□□□□□ -1.26
TMEM53-203ENST00000372242 MT1BP07438 61 aa7.19□□□□□ -1.26
TMEM53-203ENST00000372242 A0A1B0GU33 70 aa7.13□□□□□ -1.27
TMEM53-203ENST00000372242 KRTAP19-6Q3LI70 58 aa7.11□□□□□ -1.27
TMEM53-203ENST00000372242 KRTAP13-4Q3LI77 160 aa7.05□□□□□ -1.28
TMEM53-203ENST00000372242 FCGBPQ9Y6R7 5405 aaPredicted RBP7.01□□□□□ -1.29
TMEM53-203ENST00000372242 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
TMEM53-203ENST00000372242 PLAC4Q8WY50 150 aa6.98□□□□□ -1.29
TMEM53-203ENST00000372242 K7ERS5 55 aa6.96□□□□□ -1.3
TMEM53-203ENST00000372242 KRTAP10-5P60370 271 aa6.92□□□□□ -1.3
TMEM53-203ENST00000372242 A0A0D9SG42 100 aa6.88□□□□□ -1.31
TMEM53-203ENST00000372242 H3BS24 57 aa6.86□□□□□ -1.31
TMEM53-203ENST00000372242 MT1XP80297 61 aa6.85□□□□□ -1.31
TMEM53-203ENST00000372242 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
TMEM53-203ENST00000372242 ROMO1P60602 79 aa6.8□□□□□ -1.32
TMEM53-203ENST00000372242 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
TMEM53-203ENST00000372242 SPINT4Q6UDR6 99 aa6.74□□□□□ -1.33
TMEM53-203ENST00000372242 KRTAP12-1P59990 96 aa6.73□□□□□ -1.33
TMEM53-203ENST00000372242 MACF1Q9UPN3 7388 aaKnown RBP6.72□□□□□ -1.33
TMEM53-203ENST00000372242 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.33
TMEM53-203ENST00000372242 KRTAP12-2P59991 146 aa6.7□□□□□ -1.34
TMEM53-203ENST00000372242 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
TMEM53-203ENST00000372242 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.36
TMEM53-203ENST00000372242 KRTAP10-7P60409 375 aaPredicted RBP6.56□□□□□ -1.36
TMEM53-203ENST00000372242 KMT2DO14686 5537 aa6.49□□□□□ -1.37
TMEM53-203ENST00000372242 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
TMEM53-203ENST00000372242 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
TMEM53-203ENST00000372242 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.38
TMEM53-203ENST00000372242 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.38
TMEM53-203ENST00000372242 C10orf95Q9H7T3 257 aa6.43□□□□□ -1.38
TMEM53-203ENST00000372242 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
TMEM53-203ENST00000372242 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
TMEM53-203ENST00000372242 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
TMEM53-203ENST00000372242 A0A0A0MQY5 61 aa6.34□□□□□ -1.4
TMEM53-203ENST00000372242 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
TMEM53-203ENST00000372242 TNP1P09430 55 aa6.27□□□□□ -1.41
TMEM53-203ENST00000372242 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
TMEM53-203ENST00000372242 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
TMEM53-203ENST00000372242 LCE3AQ5TA76 89 aa6.14□□□□□ -1.43
TMEM53-203ENST00000372242 MDN1Q9NU22 5596 aa6.13□□□□□ -1.43
TMEM53-203ENST00000372242 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
TMEM53-203ENST00000372242 SPRR2EP22531 72 aa6.1□□□□□ -1.43
TMEM53-203ENST00000372242 SPRR2BP35325 72 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms