RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 A0A1B0GU69 56 aa7.52□□□□□ -1.21
USF1-202ENST00000368020 SPINK7P58062 85 aa7.5□□□□□ -1.21
USF1-202ENST00000368020 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
USF1-202ENST00000368020 KTN1-AS1Q86SY8 53 aa7.46□□□□□ -1.22
USF1-202ENST00000368020 LCA10Q71F78 164 aa7.44□□□□□ -1.22
USF1-202ENST00000368020 RPL37P61927 97 aaKnown RBP7.44□□□□□ -1.22
USF1-202ENST00000368020 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
USF1-202ENST00000368020 XP32Q5T750 250 aa7.38□□□□□ -1.23
USF1-202ENST00000368020 UQCR11O14957 56 aa7.38□□□□□ -1.23
USF1-202ENST00000368020 HERC1Q15751 4861 aa7.36□□□□□ -1.23
USF1-202ENST00000368020 A8MU10 97 aa7.35□□□□□ -1.23
USF1-202ENST00000368020 KRTAP3-1Q9BYR8 98 aa7.35□□□□□ -1.23
USF1-202ENST00000368020 A6NN06 94 aa7.34□□□□□ -1.23
USF1-202ENST00000368020 TPRXLQ17RH7 258 aa7.32□□□□□ -1.24
USF1-202ENST00000368020 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
USF1-202ENST00000368020 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
USF1-202ENST00000368020 RBM12B-AS1Q9P1G2 102 aa7.3□□□□□ -1.24
USF1-202ENST00000368020 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
USF1-202ENST00000368020 A0A1B0GU33 70 aa7.15□□□□□ -1.26
USF1-202ENST00000368020 S4R3F8 94 aa7.15□□□□□ -1.26
USF1-202ENST00000368020 KRTAP4-8Q9BYQ9 185 aa7.14□□□□□ -1.27
USF1-202ENST00000368020 H1FX-AS1Q4G0G2 97 aa7.13□□□□□ -1.27
USF1-202ENST00000368020 HMCN2Q8NDA2 5059 aa7.13□□□□□ -1.27
USF1-202ENST00000368020 LPAP08519 4548 aa7.08□□□□□ -1.28
USF1-202ENST00000368020 LRP2P98164 4655 aa7.07□□□□□ -1.28
USF1-202ENST00000368020 H0YAA0 97 aa7.07□□□□□ -1.28
USF1-202ENST00000368020 SEC61BP60468 96 aaKnown RBP7.07□□□□□ -1.28
USF1-202ENST00000368020 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
USF1-202ENST00000368020 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
USF1-202ENST00000368020 KRTAP9-6A0A140TA67 174 aa6.99□□□□□ -1.29
USF1-202ENST00000368020 UBR4Q5T4S7 5183 aa6.99□□□□□ -1.29
USF1-202ENST00000368020 K7ERS5 55 aa6.98□□□□□ -1.29
USF1-202ENST00000368020 CSAG1Q6PB30 78 aa6.97□□□□□ -1.29
USF1-202ENST00000368020 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.29
USF1-202ENST00000368020 LINC01554Q52M75 96 aa6.93□□□□□ -1.3
USF1-202ENST00000368020 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
USF1-202ENST00000368020 ADM2Q7Z4H4 148 aa6.85□□□□□ -1.31
USF1-202ENST00000368020 MUC17Q685J3 4493 aa6.85□□□□□ -1.31
USF1-202ENST00000368020 P0C880 135 aa6.82□□□□□ -1.32
USF1-202ENST00000368020 M0QZ58 72 aa6.81□□□□□ -1.32
USF1-202ENST00000368020 RNF213Q63HN8 5207 aa6.8□□□□□ -1.32
USF1-202ENST00000368020 KRTAP13-4Q3LI77 160 aa6.79□□□□□ -1.32
USF1-202ENST00000368020 PRAC1Q96KF2 57 aa6.78□□□□□ -1.32
USF1-202ENST00000368020 MUC2Q02817 5179 aa6.74□□□□□ -1.33
USF1-202ENST00000368020 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
USF1-202ENST00000368020 A0A0D9SG42 100 aa6.73□□□□□ -1.33
USF1-202ENST00000368020 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
USF1-202ENST00000368020 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
USF1-202ENST00000368020 ROMO1P60602 79 aa6.68□□□□□ -1.34
USF1-202ENST00000368020 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
USF1-202ENST00000368020 KRTAP9-9Q9BYP9 154 aa6.67□□□□□ -1.34
USF1-202ENST00000368020 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
USF1-202ENST00000368020 H3BS24 57 aa6.65□□□□□ -1.34
USF1-202ENST00000368020 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
USF1-202ENST00000368020 R4GN34 69 aa6.62□□□□□ -1.35
USF1-202ENST00000368020 KRTAP12-1P59990 96 aa6.61□□□□□ -1.35
USF1-202ENST00000368020 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
USF1-202ENST00000368020 KRTAP12-2P59991 146 aa6.59□□□□□ -1.36
USF1-202ENST00000368020 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
USF1-202ENST00000368020 KRTAP4-12Q9BQ66 201 aa6.54□□□□□ -1.36
USF1-202ENST00000368020 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
USF1-202ENST00000368020 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
USF1-202ENST00000368020 FAT4Q6V0I7 4981 aa6.5□□□□□ -1.37
USF1-202ENST00000368020 MT1HP80294 61 aa6.48□□□□□ -1.37
USF1-202ENST00000368020 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
USF1-202ENST00000368020 M0R2T5 61 aa6.39□□□□□ -1.39
USF1-202ENST00000368020 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
USF1-202ENST00000368020 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
USF1-202ENST00000368020 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
USF1-202ENST00000368020 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
USF1-202ENST00000368020 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
USF1-202ENST00000368020 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.42
USF1-202ENST00000368020 KRTAP4-9Q9BYQ8 210 aa6.21□□□□□ -1.42
USF1-202ENST00000368020 MT2AP02795 61 aa6.17□□□□□ -1.42
USF1-202ENST00000368020 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
USF1-202ENST00000368020 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
USF1-202ENST00000368020 MT1FP04733 61 aa6.12□□□□□ -1.43
USF1-202ENST00000368020 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
USF1-202ENST00000368020 PLAC4Q8WY50 150 aa6.09□□□□□ -1.43
USF1-202ENST00000368020 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
USF1-202ENST00000368020 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
USF1-202ENST00000368020 TNP1P09430 55 aa6.03□□□□□ -1.44
USF1-202ENST00000368020 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
USF1-202ENST00000368020 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
USF1-202ENST00000368020 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
USF1-202ENST00000368020 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
USF1-202ENST00000368020 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
USF1-202ENST00000368020 NDUFAF8A1L188 74 aa5.89□□□□□ -1.47
USF1-202ENST00000368020 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
USF1-202ENST00000368020 MT1BP07438 61 aa5.77□□□□□ -1.49
USF1-202ENST00000368020 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.5
USF1-202ENST00000368020 USH2AO75445 5202 aa5.7□□□□□ -1.5
USF1-202ENST00000368020 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
USF1-202ENST00000368020 MT1XP80297 61 aa5.68□□□□□ -1.5
USF1-202ENST00000368020 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
USF1-202ENST00000368020 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
USF1-202ENST00000368020 LUZP6Q538Z0 58 aa5.6□□□□□ -1.51
USF1-202ENST00000368020 A0A0A0MQY5 61 aa5.57□□□□□ -1.52
USF1-202ENST00000368020 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
USF1-202ENST00000368020 KRTAP8-1Q8IUC2 63 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms