RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 A0A1B0GU69 56 aa7.54□□□□□ -1.2
NEK2-201ENST00000366998 H1FX-AS1Q4G0G2 97 aa7.53□□□□□ -1.2
NEK2-201ENST00000366998 S4R3F8 94 aa7.53□□□□□ -1.2
NEK2-201ENST00000366998 MUC17Q685J3 4493 aa7.53□□□□□ -1.2
NEK2-201ENST00000366998 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
NEK2-201ENST00000366998 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
NEK2-201ENST00000366998 LCA10Q71F78 164 aa7.51□□□□□ -1.21
NEK2-201ENST00000366998 BRK1Q8WUW1 75 aa7.48□□□□□ -1.21
NEK2-201ENST00000366998 SEC61GP60059 68 aa7.47□□□□□ -1.21
NEK2-201ENST00000366998 A6NED7 52 aa7.46□□□□□ -1.22
NEK2-201ENST00000366998 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.22
NEK2-201ENST00000366998 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
NEK2-201ENST00000366998 A8MU10 97 aa7.32□□□□□ -1.24
NEK2-201ENST00000366998 UQCR11O14957 56 aa7.32□□□□□ -1.24
NEK2-201ENST00000366998 PRO0628Q9UI54 55 aa7.32□□□□□ -1.24
NEK2-201ENST00000366998 CDC42SE1Q9NRR8 79 aa7.31□□□□□ -1.24
NEK2-201ENST00000366998 KRTAP19-2Q3LHN2 52 aa7.3□□□□□ -1.24
NEK2-201ENST00000366998 A0A1B0GU33 70 aa7.27□□□□□ -1.25
NEK2-201ENST00000366998 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
NEK2-201ENST00000366998 MUC2Q02817 5179 aa7.26□□□□□ -1.25
NEK2-201ENST00000366998 KRTAP10-6P60371 365 aaPredicted RBP7.23□□□□□ -1.25
NEK2-201ENST00000366998 SPATA8Q6RVD6 105 aa7.22□□□□□ -1.25
NEK2-201ENST00000366998 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
NEK2-201ENST00000366998 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
NEK2-201ENST00000366998 P0C880 135 aa7.19□□□□□ -1.26
NEK2-201ENST00000366998 RNF213Q63HN8 5207 aa7.17□□□□□ -1.26
NEK2-201ENST00000366998 FLGP20930 4061 aaPredicted RBP7.17□□□□□ -1.26
NEK2-201ENST00000366998 H0YAA0 97 aa7.17□□□□□ -1.26
NEK2-201ENST00000366998 UBR4Q5T4S7 5183 aa7.14□□□□□ -1.27
NEK2-201ENST00000366998 LCE2CQ5TA81 110 aa7.09□□□□□ -1.28
NEK2-201ENST00000366998 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
NEK2-201ENST00000366998 PMAIP1Q13794 54 aa7.05□□□□□ -1.28
NEK2-201ENST00000366998 A0A0D9SG42 100 aa7.01□□□□□ -1.29
NEK2-201ENST00000366998 M0QZ58 72 aa6.98□□□□□ -1.29
NEK2-201ENST00000366998 A6NN06 94 aa6.97□□□□□ -1.29
NEK2-201ENST00000366998 M0R2T5 61 aa6.97□□□□□ -1.29
NEK2-201ENST00000366998 MT1HP80294 61 aa6.96□□□□□ -1.3
NEK2-201ENST00000366998 FAT4Q6V0I7 4981 aa6.96□□□□□ -1.3
NEK2-201ENST00000366998 R4GN34 69 aa6.95□□□□□ -1.3
NEK2-201ENST00000366998 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
NEK2-201ENST00000366998 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
NEK2-201ENST00000366998 K7ERS5 55 aa6.92□□□□□ -1.3
NEK2-201ENST00000366998 LINC01554Q52M75 96 aa6.87□□□□□ -1.31
NEK2-201ENST00000366998 SPINT4Q6UDR6 99 aa6.83□□□□□ -1.32
NEK2-201ENST00000366998 KRTAP12-1P59990 96 aa6.81□□□□□ -1.32
NEK2-201ENST00000366998 KRTAP12-2P59991 146 aa6.81□□□□□ -1.32
NEK2-201ENST00000366998 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
NEK2-201ENST00000366998 KTN1-AS1Q86SY8 53 aa6.78□□□□□ -1.32
NEK2-201ENST00000366998 MT2AP02795 61 aa6.72□□□□□ -1.33
NEK2-201ENST00000366998 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
NEK2-201ENST00000366998 KRTAP9-8Q9BYQ0 159 aa6.7□□□□□ -1.34
NEK2-201ENST00000366998 MT1FP04733 61 aa6.68□□□□□ -1.34
NEK2-201ENST00000366998 ROMO1P60602 79 aa6.64□□□□□ -1.35
NEK2-201ENST00000366998 PRAC1Q96KF2 57 aa6.62□□□□□ -1.35
NEK2-201ENST00000366998 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
NEK2-201ENST00000366998 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
NEK2-201ENST00000366998 LCE2AQ5TA79 106 aaPredicted RBP6.56□□□□□ -1.36
NEK2-201ENST00000366998 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
NEK2-201ENST00000366998 PLAC4Q8WY50 150 aa6.48□□□□□ -1.37
NEK2-201ENST00000366998 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
NEK2-201ENST00000366998 C10orf95Q9H7T3 257 aa6.43□□□□□ -1.38
NEK2-201ENST00000366998 KRTAP19-8Q3LI54 63 aa6.42□□□□□ -1.38
NEK2-201ENST00000366998 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.39
NEK2-201ENST00000366998 MT1BP07438 61 aa6.34□□□□□ -1.39
NEK2-201ENST00000366998 LCE2BO14633 110 aa6.27□□□□□ -1.41
NEK2-201ENST00000366998 TNP1P09430 55 aa6.22□□□□□ -1.41
NEK2-201ENST00000366998 MT1XP80297 61 aa6.17□□□□□ -1.42
NEK2-201ENST00000366998 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
NEK2-201ENST00000366998 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
NEK2-201ENST00000366998 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
NEK2-201ENST00000366998 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
NEK2-201ENST00000366998 USH2AO75445 5202 aa6.09□□□□□ -1.43
NEK2-201ENST00000366998 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
NEK2-201ENST00000366998 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
NEK2-201ENST00000366998 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
NEK2-201ENST00000366998 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
NEK2-201ENST00000366998 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
NEK2-201ENST00000366998 SSPOA2VEC9 5147 aa5.9□□□□□ -1.46
NEK2-201ENST00000366998 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
NEK2-201ENST00000366998 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
NEK2-201ENST00000366998 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
NEK2-201ENST00000366998 KRTAP9-2Q9BYQ4 174 aa5.74□□□□□ -1.49
NEK2-201ENST00000366998 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
NEK2-201ENST00000366998 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
NEK2-201ENST00000366998 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
NEK2-201ENST00000366998 KMT2DO14686 5537 aa5.67□□□□□ -1.5
NEK2-201ENST00000366998 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
NEK2-201ENST00000366998 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
NEK2-201ENST00000366998 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
NEK2-201ENST00000366998 KRTAP19-7Q3SYF9 63 aa5.49□□□□□ -1.53
NEK2-201ENST00000366998 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
NEK2-201ENST00000366998 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
NEK2-201ENST00000366998 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
NEK2-201ENST00000366998 MT1EP04732 61 aa5.4□□□□□ -1.55
NEK2-201ENST00000366998 LUZP6Q538Z0 58 aa5.36□□□□□ -1.55
NEK2-201ENST00000366998 NDUFAF8A1L188 74 aa5.33□□□□□ -1.56
NEK2-201ENST00000366998 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
NEK2-201ENST00000366998 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
NEK2-201ENST00000366998 MT1LQ93083 61 aa5.31□□□□□ -1.56
NEK2-201ENST00000366998 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms