RNA–Protein interactions for RNA: ENST00000366822.2

LINC01558-201, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2

Gene LINC01558, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-201ENST00000366822 S4R3F8 94 aa8.52□□□□□ -1.05
LINC01558-201ENST00000366822 KRTAP10-6P60371 365 aaPredicted RBP8.51□□□□□ -1.05
LINC01558-201ENST00000366822 LORP23490 312 aaPredicted RBP8.5□□□□□ -1.05
LINC01558-201ENST00000366822 H7BZZ5 65 aa8.49□□□□□ -1.05
LINC01558-201ENST00000366822 LCA10Q71F78 164 aa8.47□□□□□ -1.05
LINC01558-201ENST00000366822 ACYP2P14621 99 aa8.43□□□□□ -1.06
LINC01558-201ENST00000366822 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
LINC01558-201ENST00000366822 CRCT1Q9UGL9 99 aa8.41□□□□□ -1.06
LINC01558-201ENST00000366822 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
LINC01558-201ENST00000366822 KRTAP9-8Q9BYQ0 159 aa8.34□□□□□ -1.07
LINC01558-201ENST00000366822 CHKB-CPT1BH3BT56 60 aa8.27□□□□□ -1.09
LINC01558-201ENST00000366822 MT2AP02795 61 aa8.27□□□□□ -1.09
LINC01558-201ENST00000366822 FSIP2Q5CZC0 6907 aa8.26□□□□□ -1.09
LINC01558-201ENST00000366822 PCP4P48539 62 aa8.26□□□□□ -1.09
LINC01558-201ENST00000366822 ATP5EP56381 51 aaPredicted RBP8.25□□□□□ -1.09
LINC01558-201ENST00000366822 TMEM258P61165 79 aa8.25□□□□□ -1.09
LINC01558-201ENST00000366822 COA5Q86WW8 74 aa8.25□□□□□ -1.09
LINC01558-201ENST00000366822 MT1FP04733 61 aa8.21□□□□□ -1.1
LINC01558-201ENST00000366822 SPTSSBQ8NFR3 76 aa8.21□□□□□ -1.1
LINC01558-201ENST00000366822 H0YAA0 97 aa8.17□□□□□ -1.1
LINC01558-201ENST00000366822 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
LINC01558-201ENST00000366822 ADM2Q7Z4H4 148 aa8.08□□□□□ -1.12
LINC01558-201ENST00000366822 KRTAP9-3Q9BYQ3 159 aa8.06□□□□□ -1.12
LINC01558-201ENST00000366822 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
LINC01558-201ENST00000366822 USH2AO75445 5202 aa8.02□□□□□ -1.13
LINC01558-201ENST00000366822 SERP1Q9Y6X1 66 aa7.99□□□□□ -1.13
LINC01558-201ENST00000366822 P0C880 135 aa7.98□□□□□ -1.13
LINC01558-201ENST00000366822 CRIPTQ9P021 101 aa7.97□□□□□ -1.13
LINC01558-201ENST00000366822 SSPOA2VEC9 5147 aa7.93□□□□□ -1.14
LINC01558-201ENST00000366822 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
LINC01558-201ENST00000366822 LCE2BO14633 110 aa7.91□□□□□ -1.14
LINC01558-201ENST00000366822 SPRR2GQ9BYE4 73 aa7.9□□□□□ -1.14
LINC01558-201ENST00000366822 SEC61GP60059 68 aa7.87□□□□□ -1.15
LINC01558-201ENST00000366822 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.82□□□□□ -1.16
LINC01558-201ENST00000366822 R4GN34 69 aa7.82□□□□□ -1.16
LINC01558-201ENST00000366822 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
LINC01558-201ENST00000366822 A0A1B0GU69 56 aa7.8□□□□□ -1.16
LINC01558-201ENST00000366822 M0QZ58 72 aa7.79□□□□□ -1.16
LINC01558-201ENST00000366822 RPS28P62857 69 aaKnown RBP7.79□□□□□ -1.16
LINC01558-201ENST00000366822 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
LINC01558-201ENST00000366822 KRTAP9-7A8MTY7 169 aa7.76□□□□□ -1.17
LINC01558-201ENST00000366822 PRR15LQ9BU68 103 aa7.73□□□□□ -1.17
LINC01558-201ENST00000366822 FCGBPQ9Y6R7 5405 aaPredicted RBP7.73□□□□□ -1.17
LINC01558-201ENST00000366822 SMIM26A0A096LP01 95 aa7.72□□□□□ -1.17
LINC01558-201ENST00000366822 A0A1B0GU33 70 aa7.7□□□□□ -1.18
LINC01558-201ENST00000366822 MT1BP07438 61 aa7.69□□□□□ -1.18
LINC01558-201ENST00000366822 Q5VV11 94 aa7.69□□□□□ -1.18
LINC01558-201ENST00000366822 Q1T7F1 81 aa7.68□□□□□ -1.18
LINC01558-201ENST00000366822 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
LINC01558-201ENST00000366822 V9GYY9 64 aa7.68□□□□□ -1.18
LINC01558-201ENST00000366822 KRTAP19-6Q3LI70 58 aa7.64□□□□□ -1.19
LINC01558-201ENST00000366822 LINC01554Q52M75 96 aa7.63□□□□□ -1.19
LINC01558-201ENST00000366822 SPATA8Q6RVD6 105 aa7.59□□□□□ -1.19
LINC01558-201ENST00000366822 A6NN06 94 aa7.54□□□□□ -1.2
LINC01558-201ENST00000366822 PSPHP1O15172 72 aa7.54□□□□□ -1.2
LINC01558-201ENST00000366822 MACF1Q9UPN3 7388 aaKnown RBP7.53□□□□□ -1.2
LINC01558-201ENST00000366822 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
LINC01558-201ENST00000366822 UQCR11O14957 56 aa7.49□□□□□ -1.21
LINC01558-201ENST00000366822 A0A0D9SG42 100 aa7.48□□□□□ -1.21
LINC01558-201ENST00000366822 A8MU10 97 aa7.43□□□□□ -1.22
LINC01558-201ENST00000366822 SYNE2Q8WXH0 6885 aaKnown RBP7.4□□□□□ -1.22
LINC01558-201ENST00000366822 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
LINC01558-201ENST00000366822 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
LINC01558-201ENST00000366822 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
LINC01558-201ENST00000366822 SPINT4Q6UDR6 99 aa7.35□□□□□ -1.23
LINC01558-201ENST00000366822 MT1XP80297 61 aa7.34□□□□□ -1.23
LINC01558-201ENST00000366822 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
LINC01558-201ENST00000366822 A6NED7 52 aa7.31□□□□□ -1.24
LINC01558-201ENST00000366822 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
LINC01558-201ENST00000366822 KRTAP6-3Q3LI67 103 aa7.3□□□□□ -1.24
LINC01558-201ENST00000366822 CAMK2N1Q7Z7J9 78 aa7.26□□□□□ -1.25
LINC01558-201ENST00000366822 CDC42SE1Q9NRR8 79 aa7.14□□□□□ -1.27
LINC01558-201ENST00000366822 K7ERS5 55 aa7.1□□□□□ -1.27
LINC01558-201ENST00000366822 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
LINC01558-201ENST00000366822 C10orf95Q9H7T3 257 aa7.01□□□□□ -1.29
LINC01558-201ENST00000366822 NEBP20929 6669 aa6.99□□□□□ -1.29
LINC01558-201ENST00000366822 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
LINC01558-201ENST00000366822 MUC12Q9UKN1 5478 aa6.96□□□□□ -1.3
LINC01558-201ENST00000366822 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
LINC01558-201ENST00000366822 BRK1Q8WUW1 75 aa6.9□□□□□ -1.3
LINC01558-201ENST00000366822 KMT2DO14686 5537 aa6.89□□□□□ -1.31
LINC01558-201ENST00000366822 TNP1P09430 55 aa6.86□□□□□ -1.31
LINC01558-201ENST00000366822 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
LINC01558-201ENST00000366822 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
LINC01558-201ENST00000366822 KRTAP20-1Q3LI63 56 aa6.83□□□□□ -1.32
LINC01558-201ENST00000366822 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
LINC01558-201ENST00000366822 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
LINC01558-201ENST00000366822 MDN1Q9NU22 5596 aa6.76□□□□□ -1.33
LINC01558-201ENST00000366822 ROMO1P60602 79 aa6.76□□□□□ -1.33
LINC01558-201ENST00000366822 KRTAP25-1Q3LHN0 102 aa6.75□□□□□ -1.33
LINC01558-201ENST00000366822 SVIPQ8NHG7 77 aa6.73□□□□□ -1.33
LINC01558-201ENST00000366822 SPRR2EP22531 72 aa6.69□□□□□ -1.34
LINC01558-201ENST00000366822 SPRR2BP35325 72 aa6.69□□□□□ -1.34
LINC01558-201ENST00000366822 SPRR2AP35326 72 aa6.69□□□□□ -1.34
LINC01558-201ENST00000366822 LCE3AQ5TA76 89 aa6.65□□□□□ -1.34
LINC01558-201ENST00000366822 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
LINC01558-201ENST00000366822 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
LINC01558-201ENST00000366822 KRTAP19-7Q3SYF9 63 aa6.56□□□□□ -1.36
LINC01558-201ENST00000366822 KRTAP23-1A1A580 65 aa6.55□□□□□ -1.36
LINC01558-201ENST00000366822 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms