RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 LCA10Q71F78 164 aa9.57□□□□□ -0.88
PDLIM7-203ENST00000359895 TPRXLQ17RH7 258 aa9.54□□□□□ -0.88
PDLIM7-203ENST00000359895 A8MU10 97 aa9.51□□□□□ -0.89
PDLIM7-203ENST00000359895 SEC61GP60059 68 aa9.5□□□□□ -0.89
PDLIM7-203ENST00000359895 UQCR11O14957 56 aa9.44□□□□□ -0.9
PDLIM7-203ENST00000359895 PMAIP1Q13794 54 aa9.43□□□□□ -0.9
PDLIM7-203ENST00000359895 HMCN2Q8NDA2 5059 aa9.4□□□□□ -0.9
PDLIM7-203ENST00000359895 SPATA8Q6RVD6 105 aa9.39□□□□□ -0.91
PDLIM7-203ENST00000359895 MIR22HGQ0VDD5 57 aa9.36□□□□□ -0.91
PDLIM7-203ENST00000359895 S4R3F8 94 aa9.29□□□□□ -0.92
PDLIM7-203ENST00000359895 A6NN06 94 aa9.25□□□□□ -0.93
PDLIM7-203ENST00000359895 H1FX-AS1Q4G0G2 97 aa9.25□□□□□ -0.93
PDLIM7-203ENST00000359895 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
PDLIM7-203ENST00000359895 RBM12B-AS1Q9P1G2 102 aa9.24□□□□□ -0.93
PDLIM7-203ENST00000359895 A0A1B0GU33 70 aa9.22□□□□□ -0.93
PDLIM7-203ENST00000359895 SEC61BP60468 96 aaKnown RBP9.21□□□□□ -0.93
PDLIM7-203ENST00000359895 UBR4Q5T4S7 5183 aa9.19□□□□□ -0.94
PDLIM7-203ENST00000359895 KTN1-AS1Q86SY8 53 aa9.18□□□□□ -0.94
PDLIM7-203ENST00000359895 LPAP08519 4548 aa9.14□□□□□ -0.95
PDLIM7-203ENST00000359895 LRP2P98164 4655 aa9.13□□□□□ -0.95
PDLIM7-203ENST00000359895 H0YAA0 97 aa9.12□□□□□ -0.95
PDLIM7-203ENST00000359895 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
PDLIM7-203ENST00000359895 CSAG1Q6PB30 78 aa9.03□□□□□ -0.96
PDLIM7-203ENST00000359895 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
PDLIM7-203ENST00000359895 ADM2Q7Z4H4 148 aa8.91□□□□□ -0.98
PDLIM7-203ENST00000359895 KRTAP4-1Q9BYQ7 146 aa8.91□□□□□ -0.98
PDLIM7-203ENST00000359895 RNF213Q63HN8 5207 aa8.91□□□□□ -0.98
PDLIM7-203ENST00000359895 K7ERS5 55 aa8.9□□□□□ -0.99
PDLIM7-203ENST00000359895 P0C880 135 aa8.9□□□□□ -0.99
PDLIM7-203ENST00000359895 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
PDLIM7-203ENST00000359895 MUC17Q685J3 4493 aa8.83□□□□□ -1
PDLIM7-203ENST00000359895 M0QZ58 72 aa8.77□□□□□ -1.01
PDLIM7-203ENST00000359895 KRTAP19-2Q3LHN2 52 aa8.76□□□□□ -1.01
PDLIM7-203ENST00000359895 A0A0D9SG42 100 aa8.74□□□□□ -1.01
PDLIM7-203ENST00000359895 PRAC1Q96KF2 57 aa8.7□□□□□ -1.02
PDLIM7-203ENST00000359895 MUC2Q02817 5179 aa8.7□□□□□ -1.02
PDLIM7-203ENST00000359895 R4GN34 69 aa8.58□□□□□ -1.04
PDLIM7-203ENST00000359895 ROMO1P60602 79 aa8.57□□□□□ -1.04
PDLIM7-203ENST00000359895 KRTAP12-1P59990 96 aa8.56□□□□□ -1.04
PDLIM7-203ENST00000359895 KRTAP12-2P59991 146 aa8.55□□□□□ -1.04
PDLIM7-203ENST00000359895 SPINT4Q6UDR6 99 aa8.52□□□□□ -1.04
PDLIM7-203ENST00000359895 LINC01554Q52M75 96 aa8.51□□□□□ -1.05
PDLIM7-203ENST00000359895 FAT4Q6V0I7 4981 aa8.45□□□□□ -1.06
PDLIM7-203ENST00000359895 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
PDLIM7-203ENST00000359895 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
PDLIM7-203ENST00000359895 KRTAP25-1Q3LHN0 102 aa8.44□□□□□ -1.06
PDLIM7-203ENST00000359895 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
PDLIM7-203ENST00000359895 CRIPTQ9P021 101 aa8.37□□□□□ -1.07
PDLIM7-203ENST00000359895 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
PDLIM7-203ENST00000359895 M0R2T5 61 aa8.19□□□□□ -1.1
PDLIM7-203ENST00000359895 MT1HP80294 61 aa8.19□□□□□ -1.1
PDLIM7-203ENST00000359895 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
PDLIM7-203ENST00000359895 C10orf95Q9H7T3 257 aa8.1□□□□□ -1.11
PDLIM7-203ENST00000359895 CAMK2N1Q7Z7J9 78 aa8.09□□□□□ -1.11
PDLIM7-203ENST00000359895 SPRR2GQ9BYE4 73 aa8.05□□□□□ -1.12
PDLIM7-203ENST00000359895 H3BS24 57 aa7.97□□□□□ -1.13
PDLIM7-203ENST00000359895 MT2AP02795 61 aa7.97□□□□□ -1.13
PDLIM7-203ENST00000359895 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.14
PDLIM7-203ENST00000359895 KRTAP10-10P60014 251 aa7.95□□□□□ -1.14
PDLIM7-203ENST00000359895 KRTAP9-8Q9BYQ0 159 aa7.95□□□□□ -1.14
PDLIM7-203ENST00000359895 MT1FP04733 61 aa7.93□□□□□ -1.14
PDLIM7-203ENST00000359895 PLAC4Q8WY50 150 aa7.92□□□□□ -1.14
PDLIM7-203ENST00000359895 LCE2DQ5TA82 110 aaPredicted RBP7.87□□□□□ -1.15
PDLIM7-203ENST00000359895 KRTAP9-6A0A140TA67 174 aa7.81□□□□□ -1.16
PDLIM7-203ENST00000359895 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
PDLIM7-203ENST00000359895 TNP1P09430 55 aa7.78□□□□□ -1.16
PDLIM7-203ENST00000359895 KRTAP19-8Q3LI54 63 aa7.77□□□□□ -1.17
PDLIM7-203ENST00000359895 KRTAP23-1A1A580 65 aa7.69□□□□□ -1.18
PDLIM7-203ENST00000359895 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
PDLIM7-203ENST00000359895 KRTAP9-3Q9BYQ3 159 aa7.65□□□□□ -1.18
PDLIM7-203ENST00000359895 CRCT1Q9UGL9 99 aa7.65□□□□□ -1.18
PDLIM7-203ENST00000359895 MT1BP07438 61 aa7.61□□□□□ -1.19
PDLIM7-203ENST00000359895 KRTAP15-1Q3LI76 137 aa7.57□□□□□ -1.2
PDLIM7-203ENST00000359895 KRTAP10-5P60370 271 aa7.46□□□□□ -1.21
PDLIM7-203ENST00000359895 MT1XP80297 61 aa7.46□□□□□ -1.21
PDLIM7-203ENST00000359895 USH2AO75445 5202 aa7.43□□□□□ -1.22
PDLIM7-203ENST00000359895 LCE2BO14633 110 aa7.38□□□□□ -1.23
PDLIM7-203ENST00000359895 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
PDLIM7-203ENST00000359895 SSPOA2VEC9 5147 aa7.33□□□□□ -1.24
PDLIM7-203ENST00000359895 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
PDLIM7-203ENST00000359895 NDUFAF8A1L188 74 aa7.24□□□□□ -1.25
PDLIM7-203ENST00000359895 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
PDLIM7-203ENST00000359895 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
PDLIM7-203ENST00000359895 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
PDLIM7-203ENST00000359895 FCGBPQ9Y6R7 5405 aaPredicted RBP7.13□□□□□ -1.27
PDLIM7-203ENST00000359895 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.12□□□□□ -1.27
PDLIM7-203ENST00000359895 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
PDLIM7-203ENST00000359895 SPRR5A0A1B0GTR4 108 aa7.06□□□□□ -1.28
PDLIM7-203ENST00000359895 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
PDLIM7-203ENST00000359895 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
PDLIM7-203ENST00000359895 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
PDLIM7-203ENST00000359895 MACF1Q9UPN3 7388 aaKnown RBP6.89□□□□□ -1.31
PDLIM7-203ENST00000359895 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
PDLIM7-203ENST00000359895 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
PDLIM7-203ENST00000359895 A0A0A0MQY5 61 aa6.77□□□□□ -1.33
PDLIM7-203ENST00000359895 KRTAP4-8A0A0G2JLE6 195 aa6.77□□□□□ -1.33
PDLIM7-203ENST00000359895 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
PDLIM7-203ENST00000359895 KRTAP6-3Q3LI67 103 aa6.66□□□□□ -1.34
PDLIM7-203ENST00000359895 KRTAP19-7Q3SYF9 63 aa6.65□□□□□ -1.35
PDLIM7-203ENST00000359895 LCE3CQ5T5A8 94 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms