RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 PCLOQ9Y6V0 5065 aa10.61□□□□□ -0.71
FAM3A-202ENST00000359889 SEC61GP60059 68 aa10.58□□□□□ -0.72
FAM3A-202ENST00000359889 S4R3F8 94 aa10.58□□□□□ -0.72
FAM3A-202ENST00000359889 LCA10Q71F78 164 aa10.52□□□□□ -0.73
FAM3A-202ENST00000359889 A6NED7 52 aa10.5□□□□□ -0.73
FAM3A-202ENST00000359889 BRK1Q8WUW1 75 aa10.5□□□□□ -0.73
FAM3A-202ENST00000359889 MUC17Q685J3 4493 aa10.45□□□□□ -0.74
FAM3A-202ENST00000359889 KRTAP4-1Q9BYQ7 146 aa10.44□□□□□ -0.74
FAM3A-202ENST00000359889 KRTAP3-3Q9BYR6 98 aa10.44□□□□□ -0.74
FAM3A-202ENST00000359889 HERC1Q15751 4861 aa10.4□□□□□ -0.74
FAM3A-202ENST00000359889 HMCN2Q8NDA2 5059 aa10.39□□□□□ -0.75
FAM3A-202ENST00000359889 CSAG1Q6PB30 78 aa10.36□□□□□ -0.75
FAM3A-202ENST00000359889 PRO0628Q9UI54 55 aa10.36□□□□□ -0.75
FAM3A-202ENST00000359889 UQCR11O14957 56 aa10.35□□□□□ -0.75
FAM3A-202ENST00000359889 CDC42SE1Q9NRR8 79 aa10.31□□□□□ -0.76
FAM3A-202ENST00000359889 A0A1B0GU33 70 aa10.24□□□□□ -0.77
FAM3A-202ENST00000359889 MIR22HGQ0VDD5 57 aa10.23□□□□□ -0.77
FAM3A-202ENST00000359889 SPATA8Q6RVD6 105 aa10.2□□□□□ -0.78
FAM3A-202ENST00000359889 KRTAP19-2Q3LHN2 52 aa10.18□□□□□ -0.78
FAM3A-202ENST00000359889 A8MU10 97 aa10.14□□□□□ -0.79
FAM3A-202ENST00000359889 KRTAP10-6P60371 365 aaPredicted RBP10.13□□□□□ -0.79
FAM3A-202ENST00000359889 ADM2Q7Z4H4 148 aa10.13□□□□□ -0.79
FAM3A-202ENST00000359889 KRTAP3-2Q9BYR7 98 aa10.12□□□□□ -0.79
FAM3A-202ENST00000359889 H0YAA0 97 aa10.11□□□□□ -0.79
FAM3A-202ENST00000359889 P0C880 135 aa10.04□□□□□ -0.8
FAM3A-202ENST00000359889 MUC2Q02817 5179 aa9.96□□□□□ -0.81
FAM3A-202ENST00000359889 PMAIP1Q13794 54 aa9.94□□□□□ -0.82
FAM3A-202ENST00000359889 M0QZ58 72 aa9.9□□□□□ -0.83
FAM3A-202ENST00000359889 LCE2CQ5TA81 110 aa9.9□□□□□ -0.83
FAM3A-202ENST00000359889 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
FAM3A-202ENST00000359889 FLGP20930 4061 aaPredicted RBP9.85□□□□□ -0.83
FAM3A-202ENST00000359889 UBR4Q5T4S7 5183 aa9.85□□□□□ -0.83
FAM3A-202ENST00000359889 RNF213Q63HN8 5207 aa9.84□□□□□ -0.83
FAM3A-202ENST00000359889 K7ERS5 55 aa9.83□□□□□ -0.84
FAM3A-202ENST00000359889 A0A0D9SG42 100 aa9.79□□□□□ -0.84
FAM3A-202ENST00000359889 A6NN06 94 aa9.79□□□□□ -0.84
FAM3A-202ENST00000359889 M0R2T5 61 aa9.79□□□□□ -0.84
FAM3A-202ENST00000359889 R4GN34 69 aa9.79□□□□□ -0.84
FAM3A-202ENST00000359889 MT1HP80294 61 aa9.73□□□□□ -0.85
FAM3A-202ENST00000359889 CRIPTQ9P021 101 aa9.66□□□□□ -0.86
FAM3A-202ENST00000359889 LORP23490 312 aaPredicted RBP9.62□□□□□ -0.87
FAM3A-202ENST00000359889 LINC01554Q52M75 96 aa9.61□□□□□ -0.87
FAM3A-202ENST00000359889 SPINT4Q6UDR6 99 aa9.57□□□□□ -0.88
FAM3A-202ENST00000359889 KTN1-AS1Q86SY8 53 aa9.56□□□□□ -0.88
FAM3A-202ENST00000359889 FAT4Q6V0I7 4981 aa9.56□□□□□ -0.88
FAM3A-202ENST00000359889 KRTAP12-1P59990 96 aa9.53□□□□□ -0.88
FAM3A-202ENST00000359889 KRTAP12-2P59991 146 aa9.51□□□□□ -0.89
FAM3A-202ENST00000359889 KRTAP10-10P60014 251 aa9.39□□□□□ -0.91
FAM3A-202ENST00000359889 MT2AP02795 61 aa9.39□□□□□ -0.91
FAM3A-202ENST00000359889 KRTAP9-8Q9BYQ0 159 aa9.38□□□□□ -0.91
FAM3A-202ENST00000359889 ROMO1P60602 79 aa9.37□□□□□ -0.91
FAM3A-202ENST00000359889 MT1FP04733 61 aa9.32□□□□□ -0.92
FAM3A-202ENST00000359889 SPRR2GQ9BYE4 73 aa9.31□□□□□ -0.92
FAM3A-202ENST00000359889 CAMK2N1Q7Z7J9 78 aa9.22□□□□□ -0.93
FAM3A-202ENST00000359889 KRTAP19-1Q8IUB9 90 aa9.22□□□□□ -0.93
FAM3A-202ENST00000359889 PRAC1Q96KF2 57 aa9.22□□□□□ -0.93
FAM3A-202ENST00000359889 LCE2AQ5TA79 106 aaPredicted RBP9.18□□□□□ -0.94
FAM3A-202ENST00000359889 PLAC4Q8WY50 150 aa9.16□□□□□ -0.94
FAM3A-202ENST00000359889 KRTAP19-8Q3LI54 63 aa9.03□□□□□ -0.96
FAM3A-202ENST00000359889 KRTAP9-3Q9BYQ3 159 aa9.03□□□□□ -0.96
FAM3A-202ENST00000359889 KRTAP25-1Q3LHN0 102 aa9.01□□□□□ -0.97
FAM3A-202ENST00000359889 C10orf95Q9H7T3 257 aa9□□□□□ -0.97
FAM3A-202ENST00000359889 MT1BP07438 61 aa8.86□□□□□ -0.99
FAM3A-202ENST00000359889 TNP1P09430 55 aa8.79□□□□□ -1
FAM3A-202ENST00000359889 LCE2BO14633 110 aa8.73□□□□□ -1.01
FAM3A-202ENST00000359889 PP632Q6XCG6 107 aa8.66□□□□□ -1.02
FAM3A-202ENST00000359889 PRO2289Q9P1D8 64 aa8.66□□□□□ -1.02
FAM3A-202ENST00000359889 KRTAP10-5P60370 271 aa8.62□□□□□ -1.03
FAM3A-202ENST00000359889 MT1XP80297 61 aa8.62□□□□□ -1.03
FAM3A-202ENST00000359889 KRTAP23-1A1A580 65 aa8.56□□□□□ -1.04
FAM3A-202ENST00000359889 USH2AO75445 5202 aa8.38□□□□□ -1.07
FAM3A-202ENST00000359889 LCE2DQ5TA82 110 aaPredicted RBP8.33□□□□□ -1.08
FAM3A-202ENST00000359889 KRTAP10-12P60413 245 aa8.31□□□□□ -1.08
FAM3A-202ENST00000359889 LCE3AQ5TA76 89 aa8.3□□□□□ -1.08
FAM3A-202ENST00000359889 KRTAP10-7P60409 375 aaPredicted RBP8.28□□□□□ -1.08
FAM3A-202ENST00000359889 KRTAP19-6Q3LI70 58 aa8.2□□□□□ -1.1
FAM3A-202ENST00000359889 KRTAP8-1Q8IUC2 63 aa8.15□□□□□ -1.1
FAM3A-202ENST00000359889 SSPOA2VEC9 5147 aa8.07□□□□□ -1.12
FAM3A-202ENST00000359889 KRTAP12-3P60328 96 aa8□□□□□ -1.13
FAM3A-202ENST00000359889 KRTAP15-1Q3LI76 137 aa7.97□□□□□ -1.13
FAM3A-202ENST00000359889 FSIP2Q5CZC0 6907 aa7.94□□□□□ -1.14
FAM3A-202ENST00000359889 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
FAM3A-202ENST00000359889 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
FAM3A-202ENST00000359889 KRTAP9-2Q9BYQ4 174 aa7.88□□□□□ -1.15
FAM3A-202ENST00000359889 H3BS24 57 aa7.87□□□□□ -1.15
FAM3A-202ENST00000359889 KRTAP19-5Q3LI72 72 aa7.86□□□□□ -1.15
FAM3A-202ENST00000359889 FCGBPQ9Y6R7 5405 aaPredicted RBP7.72□□□□□ -1.17
FAM3A-202ENST00000359889 KMT2DO14686 5537 aa7.71□□□□□ -1.18
FAM3A-202ENST00000359889 KRTAP19-7Q3SYF9 63 aa7.68□□□□□ -1.18
FAM3A-202ENST00000359889 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
FAM3A-202ENST00000359889 SPRR5A0A1B0GTR4 108 aa7.64□□□□□ -1.19
FAM3A-202ENST00000359889 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
FAM3A-202ENST00000359889 KRTAP9-6A0A140TA67 174 aa7.57□□□□□ -1.2
FAM3A-202ENST00000359889 MT1EP04732 61 aa7.56□□□□□ -1.2
FAM3A-202ENST00000359889 KRTAP19-4Q3LI73 84 aa7.54□□□□□ -1.2
FAM3A-202ENST00000359889 NDUFAF8A1L188 74 aa7.47□□□□□ -1.21
FAM3A-202ENST00000359889 LCE3CQ5T5A8 94 aa7.47□□□□□ -1.21
FAM3A-202ENST00000359889 MT1LQ93083 61 aa7.44□□□□□ -1.22
FAM3A-202ENST00000359889 MACF1Q9UPN3 7388 aaKnown RBP7.36□□□□□ -1.23
FAM3A-202ENST00000359889 SPRR2FQ96RM1 72 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms