RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 ACYP2P14621 99 aa6.24□□□□□ -1.41
SYN3-202ENST00000358763 Q5VV11 94 aa6.23□□□□□ -1.41
SYN3-202ENST00000358763 HERC1Q15751 4861 aa6.22□□□□□ -1.41
SYN3-202ENST00000358763 CHKB-CPT1BH3BT56 60 aa6.21□□□□□ -1.42
SYN3-202ENST00000358763 KRTAP3-1Q9BYR8 98 aa6.19□□□□□ -1.42
SYN3-202ENST00000358763 COX6B2Q6YFQ2 88 aa6.15□□□□□ -1.42
SYN3-202ENST00000358763 PRR15LQ9BU68 103 aa6.14□□□□□ -1.43
SYN3-202ENST00000358763 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
SYN3-202ENST00000358763 A6NED7 52 aa6.12□□□□□ -1.43
SYN3-202ENST00000358763 LINC01554Q52M75 96 aa6.12□□□□□ -1.43
SYN3-202ENST00000358763 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
SYN3-202ENST00000358763 HMCN2Q8NDA2 5059 aa6.12□□□□□ -1.43
SYN3-202ENST00000358763 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
SYN3-202ENST00000358763 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
SYN3-202ENST00000358763 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
SYN3-202ENST00000358763 PRAC1Q96KF2 57 aa6.01□□□□□ -1.45
SYN3-202ENST00000358763 H1FX-AS1Q4G0G2 97 aa5.99□□□□□ -1.45
SYN3-202ENST00000358763 S4R3F8 94 aa5.98□□□□□ -1.45
SYN3-202ENST00000358763 MUC2Q02817 5179 aa5.97□□□□□ -1.45
SYN3-202ENST00000358763 KRTAP3-3Q9BYR6 98 aa5.96□□□□□ -1.46
SYN3-202ENST00000358763 A0A1B0GU69 56 aa5.94□□□□□ -1.46
SYN3-202ENST00000358763 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
SYN3-202ENST00000358763 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
SYN3-202ENST00000358763 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
SYN3-202ENST00000358763 CSAG1Q6PB30 78 aa5.82□□□□□ -1.48
SYN3-202ENST00000358763 RNF213Q63HN8 5207 aa5.82□□□□□ -1.48
SYN3-202ENST00000358763 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
SYN3-202ENST00000358763 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
SYN3-202ENST00000358763 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
SYN3-202ENST00000358763 UQCR11O14957 56 aa5.75□□□□□ -1.49
SYN3-202ENST00000358763 FLGP20930 4061 aaPredicted RBP5.74□□□□□ -1.49
SYN3-202ENST00000358763 P0C880 135 aa5.74□□□□□ -1.49
SYN3-202ENST00000358763 A0A1B0GU33 70 aa5.73□□□□□ -1.49
SYN3-202ENST00000358763 FAT4Q6V0I7 4981 aa5.73□□□□□ -1.49
SYN3-202ENST00000358763 LCE2CQ5TA81 110 aa5.72□□□□□ -1.49
SYN3-202ENST00000358763 MIR22HGQ0VDD5 57 aa5.71□□□□□ -1.5
SYN3-202ENST00000358763 ROMO1P60602 79 aa5.7□□□□□ -1.5
SYN3-202ENST00000358763 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
SYN3-202ENST00000358763 H0YAA0 97 aa5.68□□□□□ -1.5
SYN3-202ENST00000358763 KRTAP13-4Q3LI77 160 aa5.64□□□□□ -1.51
SYN3-202ENST00000358763 MT1HP80294 61 aa5.61□□□□□ -1.51
SYN3-202ENST00000358763 M0R2T5 61 aa5.6□□□□□ -1.51
SYN3-202ENST00000358763 A0A0D9SG42 100 aa5.57□□□□□ -1.52
SYN3-202ENST00000358763 LORP23490 312 aaPredicted RBP5.57□□□□□ -1.52
SYN3-202ENST00000358763 M0QZ58 72 aa5.53□□□□□ -1.52
SYN3-202ENST00000358763 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
SYN3-202ENST00000358763 R4GN34 69 aa5.52□□□□□ -1.53
SYN3-202ENST00000358763 CRIPTQ9P021 101 aa5.52□□□□□ -1.53
SYN3-202ENST00000358763 KRTAP12-2P59991 146 aa5.41□□□□□ -1.54
SYN3-202ENST00000358763 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
SYN3-202ENST00000358763 K7ERS5 55 aa5.41□□□□□ -1.54
SYN3-202ENST00000358763 MT2AP02795 61 aa5.41□□□□□ -1.54
SYN3-202ENST00000358763 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.54
SYN3-202ENST00000358763 KRTAP12-1P59990 96 aa5.4□□□□□ -1.55
SYN3-202ENST00000358763 MT1FP04733 61 aa5.39□□□□□ -1.55
SYN3-202ENST00000358763 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
SYN3-202ENST00000358763 NDUFAF8A1L188 74 aa5.32□□□□□ -1.56
SYN3-202ENST00000358763 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
SYN3-202ENST00000358763 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
SYN3-202ENST00000358763 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
SYN3-202ENST00000358763 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
SYN3-202ENST00000358763 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
SYN3-202ENST00000358763 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
SYN3-202ENST00000358763 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
SYN3-202ENST00000358763 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
SYN3-202ENST00000358763 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
SYN3-202ENST00000358763 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
SYN3-202ENST00000358763 C10orf95Q9H7T3 257 aa5.12□□□□□ -1.59
SYN3-202ENST00000358763 MT1BP07438 61 aa5.1□□□□□ -1.59
SYN3-202ENST00000358763 LCE2BO14633 110 aa5.08□□□□□ -1.6
SYN3-202ENST00000358763 KRTAP9-6A0A140TA67 174 aa5.03□□□□□ -1.6
SYN3-202ENST00000358763 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
SYN3-202ENST00000358763 USH2AO75445 5202 aa4.98□□□□□ -1.61
SYN3-202ENST00000358763 MT1XP80297 61 aa4.96□□□□□ -1.62
SYN3-202ENST00000358763 KRTAP10-5P60370 271 aa4.94□□□□□ -1.62
SYN3-202ENST00000358763 TNP1P09430 55 aa4.92□□□□□ -1.62
SYN3-202ENST00000358763 LCE2DQ5TA82 110 aaPredicted RBP4.86□□□□□ -1.63
SYN3-202ENST00000358763 CRCT1Q9UGL9 99 aa4.85□□□□□ -1.63
SYN3-202ENST00000358763 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
SYN3-202ENST00000358763 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
SYN3-202ENST00000358763 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
SYN3-202ENST00000358763 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
SYN3-202ENST00000358763 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
SYN3-202ENST00000358763 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
SYN3-202ENST00000358763 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
SYN3-202ENST00000358763 KRTAP19-6Q3LI70 58 aa4.69□□□□□ -1.66
SYN3-202ENST00000358763 KMT2DO14686 5537 aa4.65□□□□□ -1.67
SYN3-202ENST00000358763 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
SYN3-202ENST00000358763 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
SYN3-202ENST00000358763 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.67
SYN3-202ENST00000358763 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
SYN3-202ENST00000358763 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
SYN3-202ENST00000358763 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
SYN3-202ENST00000358763 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
SYN3-202ENST00000358763 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
SYN3-202ENST00000358763 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
SYN3-202ENST00000358763 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
SYN3-202ENST00000358763 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
SYN3-202ENST00000358763 MT1EP04732 61 aa4.33□□□□□ -1.72
SYN3-202ENST00000358763 INE1O15225 51 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms