RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 S4R3F8 94 aa7.43□□□□□ -1.22
TPM1-206ENST00000358278 KRTAP10-6P60371 365 aaPredicted RBP7.4□□□□□ -1.23
TPM1-206ENST00000358278 CYSTM1Q9H1C7 97 aa7.38□□□□□ -1.23
TPM1-206ENST00000358278 DMAC1Q96GE9 116 aa7.38□□□□□ -1.23
TPM1-206ENST00000358278 TMEM258P61165 79 aa7.37□□□□□ -1.23
TPM1-206ENST00000358278 LCA10Q71F78 164 aa7.37□□□□□ -1.23
TPM1-206ENST00000358278 NDUFC1O43677 76 aa7.33□□□□□ -1.24
TPM1-206ENST00000358278 SPANXA2-OT1Q8N9U9 137 aa7.32□□□□□ -1.24
TPM1-206ENST00000358278 H7BZZ5 65 aa7.3□□□□□ -1.24
TPM1-206ENST00000358278 CSAG1Q6PB30 78 aa7.3□□□□□ -1.24
TPM1-206ENST00000358278 ACYP2P14621 99 aa7.29□□□□□ -1.24
TPM1-206ENST00000358278 KRTAP9-8Q9BYQ0 159 aa7.25□□□□□ -1.25
TPM1-206ENST00000358278 ATP5EP56381 51 aaPredicted RBP7.22□□□□□ -1.25
TPM1-206ENST00000358278 MT2AP02795 61 aa7.21□□□□□ -1.26
TPM1-206ENST00000358278 CHKB-CPT1BH3BT56 60 aa7.19□□□□□ -1.26
TPM1-206ENST00000358278 RPS28P62857 69 aaKnown RBP7.18□□□□□ -1.26
TPM1-206ENST00000358278 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
TPM1-206ENST00000358278 MT1FP04733 61 aa7.15□□□□□ -1.26
TPM1-206ENST00000358278 SPTSSBQ8NFR3 76 aa7.13□□□□□ -1.27
TPM1-206ENST00000358278 SERP1Q9Y6X1 66 aa7.13□□□□□ -1.27
TPM1-206ENST00000358278 COA5Q86WW8 74 aa7.12□□□□□ -1.27
TPM1-206ENST00000358278 H0YAA0 97 aa7.06□□□□□ -1.28
TPM1-206ENST00000358278 ADM2Q7Z4H4 148 aa7.03□□□□□ -1.28
TPM1-206ENST00000358278 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
TPM1-206ENST00000358278 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
TPM1-206ENST00000358278 SMIM26A0A096LP01 95 aa6.96□□□□□ -1.29
TPM1-206ENST00000358278 P0C880 135 aa6.92□□□□□ -1.3
TPM1-206ENST00000358278 CRIPTQ9P021 101 aa6.92□□□□□ -1.3
TPM1-206ENST00000358278 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
TPM1-206ENST00000358278 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
TPM1-206ENST00000358278 SPRR2GQ9BYE4 73 aa6.86□□□□□ -1.31
TPM1-206ENST00000358278 SEC61GP60059 68 aa6.85□□□□□ -1.31
TPM1-206ENST00000358278 R4GN34 69 aa6.84□□□□□ -1.31
TPM1-206ENST00000358278 M0QZ58 72 aa6.8□□□□□ -1.32
TPM1-206ENST00000358278 USH2AO75445 5202 aa6.79□□□□□ -1.32
TPM1-206ENST00000358278 Q1T7F1 81 aa6.78□□□□□ -1.32
TPM1-206ENST00000358278 V9GYY9 64 aa6.76□□□□□ -1.33
TPM1-206ENST00000358278 A0A1B0GU69 56 aa6.76□□□□□ -1.33
TPM1-206ENST00000358278 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
TPM1-206ENST00000358278 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
TPM1-206ENST00000358278 Q5VV11 94 aa6.73□□□□□ -1.33
TPM1-206ENST00000358278 CRCT1Q9UGL9 99 aa6.71□□□□□ -1.34
TPM1-206ENST00000358278 LINC01554Q52M75 96 aa6.7□□□□□ -1.34
TPM1-206ENST00000358278 PRR15LQ9BU68 103 aa6.69□□□□□ -1.34
TPM1-206ENST00000358278 LINC01558Q9Y6Z2 57 aa6.69□□□□□ -1.34
TPM1-206ENST00000358278 MT1BP07438 61 aa6.67□□□□□ -1.34
TPM1-206ENST00000358278 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
TPM1-206ENST00000358278 A0A1B0GU33 70 aa6.66□□□□□ -1.34
TPM1-206ENST00000358278 KRTAP9-6A0A140TA67 174 aa6.64□□□□□ -1.35
TPM1-206ENST00000358278 PSPHP1O15172 72 aa6.63□□□□□ -1.35
TPM1-206ENST00000358278 KRTAP13-4Q3LI77 160 aa6.63□□□□□ -1.35
TPM1-206ENST00000358278 PLAC4Q8WY50 150 aa6.59□□□□□ -1.36
TPM1-206ENST00000358278 SPATA8Q6RVD6 105 aa6.58□□□□□ -1.36
TPM1-206ENST00000358278 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
TPM1-206ENST00000358278 A0A0D9SG42 100 aa6.52□□□□□ -1.37
TPM1-206ENST00000358278 BRK1Q8WUW1 75 aa6.52□□□□□ -1.37
TPM1-206ENST00000358278 A6NN06 94 aa6.51□□□□□ -1.37
TPM1-206ENST00000358278 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
TPM1-206ENST00000358278 PRO0628Q9UI54 55 aa6.47□□□□□ -1.37
TPM1-206ENST00000358278 UQCR11O14957 56 aa6.47□□□□□ -1.37
TPM1-206ENST00000358278 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
TPM1-206ENST00000358278 A6NED7 52 aa6.45□□□□□ -1.38
TPM1-206ENST00000358278 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
TPM1-206ENST00000358278 A8MU10 97 aa6.42□□□□□ -1.38
TPM1-206ENST00000358278 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
TPM1-206ENST00000358278 SPINT4Q6UDR6 99 aa6.39□□□□□ -1.39
TPM1-206ENST00000358278 MT1XP80297 61 aa6.37□□□□□ -1.39
TPM1-206ENST00000358278 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
TPM1-206ENST00000358278 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
TPM1-206ENST00000358278 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
TPM1-206ENST00000358278 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
TPM1-206ENST00000358278 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
TPM1-206ENST00000358278 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
TPM1-206ENST00000358278 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
TPM1-206ENST00000358278 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
TPM1-206ENST00000358278 MACF1Q9UPN3 7388 aaKnown RBP6.25□□□□□ -1.41
TPM1-206ENST00000358278 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
TPM1-206ENST00000358278 K7ERS5 55 aa6.18□□□□□ -1.42
TPM1-206ENST00000358278 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
TPM1-206ENST00000358278 SYNE2Q8WXH0 6885 aaKnown RBP6.1□□□□□ -1.43
TPM1-206ENST00000358278 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
TPM1-206ENST00000358278 KRTAP4-12Q9BQ66 201 aa6.1□□□□□ -1.43
TPM1-206ENST00000358278 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
TPM1-206ENST00000358278 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
TPM1-206ENST00000358278 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
TPM1-206ENST00000358278 KMT2DO14686 5537 aa6.04□□□□□ -1.44
TPM1-206ENST00000358278 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
TPM1-206ENST00000358278 C10orf95Q9H7T3 257 aa6.03□□□□□ -1.44
TPM1-206ENST00000358278 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
TPM1-206ENST00000358278 TNP1P09430 55 aa5.96□□□□□ -1.45
TPM1-206ENST00000358278 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
TPM1-206ENST00000358278 KRTAP8-1Q8IUC2 63 aa5.95□□□□□ -1.46
TPM1-206ENST00000358278 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
TPM1-206ENST00000358278 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.47
TPM1-206ENST00000358278 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
TPM1-206ENST00000358278 KRTAP5-9P26371 169 aa5.85□□□□□ -1.47
TPM1-206ENST00000358278 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.47
TPM1-206ENST00000358278 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
TPM1-206ENST00000358278 ROMO1P60602 79 aa5.82□□□□□ -1.48
TPM1-206ENST00000358278 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms