RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 RPS28P62857 69 aaKnown RBP7.54□□□□□ -1.2
TRIM13-201ENST00000356017 S4R3F8 94 aa7.52□□□□□ -1.2
TRIM13-201ENST00000356017 SERP1Q9Y6X1 66 aa7.52□□□□□ -1.21
TRIM13-201ENST00000356017 LCA10Q71F78 164 aa7.47□□□□□ -1.21
TRIM13-201ENST00000356017 SPANXA2-OT1Q8N9U9 137 aa7.47□□□□□ -1.21
TRIM13-201ENST00000356017 CSAG1Q6PB30 78 aa7.45□□□□□ -1.22
TRIM13-201ENST00000356017 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
TRIM13-201ENST00000356017 DMAC1Q96GE9 116 aa7.44□□□□□ -1.22
TRIM13-201ENST00000356017 MT2AP02795 61 aa7.38□□□□□ -1.23
TRIM13-201ENST00000356017 KRTAP3-3Q9BYR6 98 aa7.38□□□□□ -1.23
TRIM13-201ENST00000356017 ACYP2P14621 99 aa7.37□□□□□ -1.23
TRIM13-201ENST00000356017 KRTAP10-10P60014 251 aa7.34□□□□□ -1.24
TRIM13-201ENST00000356017 LCE2DQ5TA82 110 aaPredicted RBP7.34□□□□□ -1.24
TRIM13-201ENST00000356017 SMIM26A0A096LP01 95 aa7.33□□□□□ -1.24
TRIM13-201ENST00000356017 MT1FP04733 61 aa7.31□□□□□ -1.24
TRIM13-201ENST00000356017 COA5Q86WW8 74 aa7.3□□□□□ -1.24
TRIM13-201ENST00000356017 KRTAP9-2Q9BYQ4 174 aa7.29□□□□□ -1.24
TRIM13-201ENST00000356017 CHKB-CPT1BH3BT56 60 aa7.23□□□□□ -1.25
TRIM13-201ENST00000356017 H0YAA0 97 aa7.22□□□□□ -1.25
TRIM13-201ENST00000356017 SPTSSBQ8NFR3 76 aa7.22□□□□□ -1.25
TRIM13-201ENST00000356017 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
TRIM13-201ENST00000356017 Q1T7F1 81 aa7.16□□□□□ -1.26
TRIM13-201ENST00000356017 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
TRIM13-201ENST00000356017 CRIPTQ9P021 101 aa7.1□□□□□ -1.27
TRIM13-201ENST00000356017 LCE2BO14633 110 aa7.06□□□□□ -1.28
TRIM13-201ENST00000356017 PSPHP1O15172 72 aa7.06□□□□□ -1.28
TRIM13-201ENST00000356017 V9GYY9 64 aa7.06□□□□□ -1.28
TRIM13-201ENST00000356017 LINC01558Q9Y6Z2 57 aa7.04□□□□□ -1.28
TRIM13-201ENST00000356017 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
TRIM13-201ENST00000356017 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
TRIM13-201ENST00000356017 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.29
TRIM13-201ENST00000356017 PRR15LQ9BU68 103 aa7.01□□□□□ -1.29
TRIM13-201ENST00000356017 Q5VV11 94 aa7.01□□□□□ -1.29
TRIM13-201ENST00000356017 P0C880 135 aa6.99□□□□□ -1.29
TRIM13-201ENST00000356017 KRTAP3-2Q9BYR7 98 aa6.99□□□□□ -1.29
TRIM13-201ENST00000356017 USH2AO75445 5202 aa6.97□□□□□ -1.29
TRIM13-201ENST00000356017 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
TRIM13-201ENST00000356017 R4GN34 69 aa6.94□□□□□ -1.3
TRIM13-201ENST00000356017 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
TRIM13-201ENST00000356017 SEC61GP60059 68 aa6.9□□□□□ -1.3
TRIM13-201ENST00000356017 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.31
TRIM13-201ENST00000356017 M0QZ58 72 aa6.88□□□□□ -1.31
TRIM13-201ENST00000356017 A0A1B0GU69 56 aa6.86□□□□□ -1.31
TRIM13-201ENST00000356017 BRK1Q8WUW1 75 aa6.86□□□□□ -1.31
TRIM13-201ENST00000356017 MT1BP07438 61 aa6.82□□□□□ -1.32
TRIM13-201ENST00000356017 A8MU10 97 aa6.81□□□□□ -1.32
TRIM13-201ENST00000356017 A6NED7 52 aa6.8□□□□□ -1.32
TRIM13-201ENST00000356017 SSPOA2VEC9 5147 aa6.8□□□□□ -1.32
TRIM13-201ENST00000356017 KRTAP19-6Q3LI70 58 aa6.78□□□□□ -1.32
TRIM13-201ENST00000356017 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
TRIM13-201ENST00000356017 LINC01554Q52M75 96 aa6.76□□□□□ -1.33
TRIM13-201ENST00000356017 A0A1B0GU33 70 aa6.72□□□□□ -1.33
TRIM13-201ENST00000356017 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
TRIM13-201ENST00000356017 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
TRIM13-201ENST00000356017 KRTAP13-4Q3LI77 160 aa6.67□□□□□ -1.34
TRIM13-201ENST00000356017 UQCR11O14957 56 aa6.65□□□□□ -1.34
TRIM13-201ENST00000356017 A6NN06 94 aa6.65□□□□□ -1.35
TRIM13-201ENST00000356017 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
TRIM13-201ENST00000356017 SPATA8Q6RVD6 105 aa6.64□□□□□ -1.35
TRIM13-201ENST00000356017 MIR22HGQ0VDD5 57 aa6.62□□□□□ -1.35
TRIM13-201ENST00000356017 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
TRIM13-201ENST00000356017 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
TRIM13-201ENST00000356017 SVIPQ8NHG7 77 aa6.56□□□□□ -1.36
TRIM13-201ENST00000356017 A0A0D9SG42 100 aa6.54□□□□□ -1.36
TRIM13-201ENST00000356017 MT1XP80297 61 aa6.5□□□□□ -1.37
TRIM13-201ENST00000356017 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
TRIM13-201ENST00000356017 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
TRIM13-201ENST00000356017 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
TRIM13-201ENST00000356017 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
TRIM13-201ENST00000356017 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
TRIM13-201ENST00000356017 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
TRIM13-201ENST00000356017 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
TRIM13-201ENST00000356017 SYNE2Q8WXH0 6885 aaKnown RBP6.28□□□□□ -1.4
TRIM13-201ENST00000356017 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
TRIM13-201ENST00000356017 KTN1-AS1Q86SY8 53 aa6.25□□□□□ -1.41
TRIM13-201ENST00000356017 K7ERS5 55 aa6.21□□□□□ -1.41
TRIM13-201ENST00000356017 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
TRIM13-201ENST00000356017 KRTAP10-12P60413 245 aa6.19□□□□□ -1.42
TRIM13-201ENST00000356017 KRTAP6-3Q3LI67 103 aa6.18□□□□□ -1.42
TRIM13-201ENST00000356017 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
TRIM13-201ENST00000356017 KMT2DO14686 5537 aa6.11□□□□□ -1.43
TRIM13-201ENST00000356017 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
TRIM13-201ENST00000356017 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
TRIM13-201ENST00000356017 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
TRIM13-201ENST00000356017 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
TRIM13-201ENST00000356017 KRTAP5-9P26371 169 aa6.07□□□□□ -1.44
TRIM13-201ENST00000356017 ROMO1P60602 79 aa6.06□□□□□ -1.44
TRIM13-201ENST00000356017 TNP1P09430 55 aa6.05□□□□□ -1.44
TRIM13-201ENST00000356017 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
TRIM13-201ENST00000356017 MUC12Q9UKN1 5478 aa5.91□□□□□ -1.46
TRIM13-201ENST00000356017 KRTAP25-1Q3LHN0 102 aa5.91□□□□□ -1.46
TRIM13-201ENST00000356017 NEBP20929 6669 aa5.84□□□□□ -1.47
TRIM13-201ENST00000356017 MDN1Q9NU22 5596 aa5.83□□□□□ -1.48
TRIM13-201ENST00000356017 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
TRIM13-201ENST00000356017 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
TRIM13-201ENST00000356017 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
TRIM13-201ENST00000356017 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
TRIM13-201ENST00000356017 SPRR2EP22531 72 aa5.79□□□□□ -1.48
TRIM13-201ENST00000356017 SPRR2BP35325 72 aa5.79□□□□□ -1.48
TRIM13-201ENST00000356017 SPRR2AP35326 72 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms