RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 Q5VV11 94 aa10.44□□□□□ -0.74
TRIM4-202ENST00000354241 RBM12B-AS1Q9P1G2 102 aa10.41□□□□□ -0.74
TRIM4-202ENST00000354241 PRR15LQ9BU68 103 aa10.35□□□□□ -0.75
TRIM4-202ENST00000354241 LINC01558Q9Y6Z2 57 aa10.33□□□□□ -0.76
TRIM4-202ENST00000354241 H1FX-AS1Q4G0G2 97 aa10.29□□□□□ -0.76
TRIM4-202ENST00000354241 S4R3F8 94 aa10.24□□□□□ -0.77
TRIM4-202ENST00000354241 SPTSSBQ8NFR3 76 aa10.22□□□□□ -0.77
TRIM4-202ENST00000354241 LCA10Q71F78 164 aa10.21□□□□□ -0.78
TRIM4-202ENST00000354241 A6NED7 52 aa10.17□□□□□ -0.78
TRIM4-202ENST00000354241 A8MU10 97 aa10.15□□□□□ -0.78
TRIM4-202ENST00000354241 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
TRIM4-202ENST00000354241 MUC2Q02817 5179 aa10.14□□□□□ -0.79
TRIM4-202ENST00000354241 KRTAP19-2Q3LHN2 52 aa10.13□□□□□ -0.79
TRIM4-202ENST00000354241 CDC42SE1Q9NRR8 79 aa10.13□□□□□ -0.79
TRIM4-202ENST00000354241 PMAIP1Q13794 54 aa10.1□□□□□ -0.79
TRIM4-202ENST00000354241 UBR4Q5T4S7 5183 aa10.08□□□□□ -0.8
TRIM4-202ENST00000354241 RNF213Q63HN8 5207 aa10.02□□□□□ -0.8
TRIM4-202ENST00000354241 A0A1B0GU69 56 aa10.01□□□□□ -0.81
TRIM4-202ENST00000354241 CSAG1Q6PB30 78 aa9.99□□□□□ -0.81
TRIM4-202ENST00000354241 SEC61GP60059 68 aa9.96□□□□□ -0.81
TRIM4-202ENST00000354241 A6NN06 94 aa9.94□□□□□ -0.82
TRIM4-202ENST00000354241 LCE2CQ5TA81 110 aa9.92□□□□□ -0.82
TRIM4-202ENST00000354241 KTN1-AS1Q86SY8 53 aa9.9□□□□□ -0.83
TRIM4-202ENST00000354241 FLGP20930 4061 aaPredicted RBP9.87□□□□□ -0.83
TRIM4-202ENST00000354241 SPATA8Q6RVD6 105 aa9.8□□□□□ -0.84
TRIM4-202ENST00000354241 ADM2Q7Z4H4 148 aa9.79□□□□□ -0.84
TRIM4-202ENST00000354241 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
TRIM4-202ENST00000354241 UQCR11O14957 56 aa9.76□□□□□ -0.85
TRIM4-202ENST00000354241 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
TRIM4-202ENST00000354241 MT1HP80294 61 aa9.74□□□□□ -0.85
TRIM4-202ENST00000354241 FAT4Q6V0I7 4981 aa9.73□□□□□ -0.85
TRIM4-202ENST00000354241 H0YAA0 97 aa9.73□□□□□ -0.85
TRIM4-202ENST00000354241 P0C880 135 aa9.72□□□□□ -0.85
TRIM4-202ENST00000354241 A0A1B0GU33 70 aa9.71□□□□□ -0.86
TRIM4-202ENST00000354241 M0R2T5 61 aa9.7□□□□□ -0.86
TRIM4-202ENST00000354241 MIR22HGQ0VDD5 57 aa9.7□□□□□ -0.86
TRIM4-202ENST00000354241 KRTAP13-4Q3LI77 160 aa9.52□□□□□ -0.89
TRIM4-202ENST00000354241 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
TRIM4-202ENST00000354241 M0QZ58 72 aa9.44□□□□□ -0.9
TRIM4-202ENST00000354241 R4GN34 69 aa9.44□□□□□ -0.9
TRIM4-202ENST00000354241 A0A0D9SG42 100 aa9.39□□□□□ -0.91
TRIM4-202ENST00000354241 KRTAP9-8Q9BYQ0 159 aa9.37□□□□□ -0.91
TRIM4-202ENST00000354241 MT2AP02795 61 aa9.35□□□□□ -0.91
TRIM4-202ENST00000354241 PRAC1Q96KF2 57 aa9.35□□□□□ -0.91
TRIM4-202ENST00000354241 LCE2AQ5TA79 106 aaPredicted RBP9.34□□□□□ -0.91
TRIM4-202ENST00000354241 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
TRIM4-202ENST00000354241 MT1FP04733 61 aa9.31□□□□□ -0.92
TRIM4-202ENST00000354241 LINC01554Q52M75 96 aa9.31□□□□□ -0.92
TRIM4-202ENST00000354241 KRTAP10-10P60014 251 aa9.3□□□□□ -0.92
TRIM4-202ENST00000354241 K7ERS5 55 aa9.16□□□□□ -0.94
TRIM4-202ENST00000354241 SPINT4Q6UDR6 99 aa9.15□□□□□ -0.94
TRIM4-202ENST00000354241 KRTAP12-1P59990 96 aa9.14□□□□□ -0.95
TRIM4-202ENST00000354241 KRTAP12-2P59991 146 aa9.13□□□□□ -0.95
TRIM4-202ENST00000354241 SPRR2GQ9BYE4 73 aa9.13□□□□□ -0.95
TRIM4-202ENST00000354241 KRTAP19-1Q8IUB9 90 aa9.12□□□□□ -0.95
TRIM4-202ENST00000354241 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
TRIM4-202ENST00000354241 KRTAP25-1Q3LHN0 102 aa8.97□□□□□ -0.97
TRIM4-202ENST00000354241 KRTAP19-8Q3LI54 63 aa8.89□□□□□ -0.99
TRIM4-202ENST00000354241 ROMO1P60602 79 aa8.88□□□□□ -0.99
TRIM4-202ENST00000354241 PLAC4Q8WY50 150 aa8.88□□□□□ -0.99
TRIM4-202ENST00000354241 CAMK2N1Q7Z7J9 78 aa8.86□□□□□ -0.99
TRIM4-202ENST00000354241 LCE2BO14633 110 aa8.79□□□□□ -1
TRIM4-202ENST00000354241 MT1BP07438 61 aa8.79□□□□□ -1
TRIM4-202ENST00000354241 C10orf95Q9H7T3 257 aa8.66□□□□□ -1.02
TRIM4-202ENST00000354241 USH2AO75445 5202 aa8.5□□□□□ -1.05
TRIM4-202ENST00000354241 MT1XP80297 61 aa8.5□□□□□ -1.05
TRIM4-202ENST00000354241 KRTAP10-5P60370 271 aa8.5□□□□□ -1.05
TRIM4-202ENST00000354241 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
TRIM4-202ENST00000354241 PRO2289Q9P1D8 64 aa8.42□□□□□ -1.06
TRIM4-202ENST00000354241 TNP1P09430 55 aa8.4□□□□□ -1.06
TRIM4-202ENST00000354241 SSPOA2VEC9 5147 aa8.24□□□□□ -1.09
TRIM4-202ENST00000354241 KRTAP19-6Q3LI70 58 aa8.23□□□□□ -1.09
TRIM4-202ENST00000354241 KRTAP10-7P60409 375 aaPredicted RBP8.19□□□□□ -1.1
TRIM4-202ENST00000354241 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
TRIM4-202ENST00000354241 KRTAP15-1Q3LI76 137 aa8.17□□□□□ -1.1
TRIM4-202ENST00000354241 FSIP2Q5CZC0 6907 aa8.17□□□□□ -1.1
TRIM4-202ENST00000354241 H3BS24 57 aa8.15□□□□□ -1.1
TRIM4-202ENST00000354241 PP632Q6XCG6 107 aa8.1□□□□□ -1.11
TRIM4-202ENST00000354241 KRTAP10-12P60413 245 aa8.09□□□□□ -1.11
TRIM4-202ENST00000354241 KRTAP23-1A1A580 65 aa8.07□□□□□ -1.12
TRIM4-202ENST00000354241 LCE3AQ5TA76 89 aa8.06□□□□□ -1.12
TRIM4-202ENST00000354241 FCGBPQ9Y6R7 5405 aaPredicted RBP7.9□□□□□ -1.15
TRIM4-202ENST00000354241 CRCT1Q9UGL9 99 aa7.9□□□□□ -1.15
TRIM4-202ENST00000354241 KRTAP4-8A0A0G2JLE6 195 aa7.88□□□□□ -1.15
TRIM4-202ENST00000354241 KRTAP4-8Q9BYQ9 185 aa7.88□□□□□ -1.15
TRIM4-202ENST00000354241 NDUFAF8A1L188 74 aa7.85□□□□□ -1.15
TRIM4-202ENST00000354241 KRTAP8-1Q8IUC2 63 aa7.84□□□□□ -1.15
TRIM4-202ENST00000354241 KMT2DO14686 5537 aa7.84□□□□□ -1.15
TRIM4-202ENST00000354241 KRTAP12-3P60328 96 aa7.72□□□□□ -1.17
TRIM4-202ENST00000354241 KRTAP19-5Q3LI72 72 aa7.71□□□□□ -1.18
TRIM4-202ENST00000354241 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
TRIM4-202ENST00000354241 KRTAP9-6A0A140TA67 174 aa7.54□□□□□ -1.2
TRIM4-202ENST00000354241 MACF1Q9UPN3 7388 aaKnown RBP7.51□□□□□ -1.21
TRIM4-202ENST00000354241 LUZP6Q538Z0 58 aa7.47□□□□□ -1.21
TRIM4-202ENST00000354241 MT1EP04732 61 aa7.46□□□□□ -1.22
TRIM4-202ENST00000354241 SPRR5A0A1B0GTR4 108 aa7.4□□□□□ -1.23
TRIM4-202ENST00000354241 SPRR2FQ96RM1 72 aa7.36□□□□□ -1.23
TRIM4-202ENST00000354241 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
TRIM4-202ENST00000354241 MT1LQ93083 61 aa7.31□□□□□ -1.24
TRIM4-202ENST00000354241 SYNE2Q8WXH0 6885 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms