RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 C4orf26Q17RF5 130 aa6.88□□□□□ -1.31
SEC13-202ENST00000350697 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
SEC13-202ENST00000350697 ACYP2P14621 99 aa6.84□□□□□ -1.31
SEC13-202ENST00000350697 A8MUN3 132 aa6.84□□□□□ -1.32
SEC13-202ENST00000350697 DMAC1Q96GE9 116 aa6.84□□□□□ -1.32
SEC13-202ENST00000350697 SMIM26A0A096LP01 95 aa6.82□□□□□ -1.32
SEC13-202ENST00000350697 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
SEC13-202ENST00000350697 COA5Q86WW8 74 aa6.79□□□□□ -1.32
SEC13-202ENST00000350697 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
SEC13-202ENST00000350697 CHKB-CPT1BH3BT56 60 aa6.75□□□□□ -1.33
SEC13-202ENST00000350697 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
SEC13-202ENST00000350697 V9GYY9 64 aa6.72□□□□□ -1.33
SEC13-202ENST00000350697 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
SEC13-202ENST00000350697 S4R3F8 94 aa6.68□□□□□ -1.34
SEC13-202ENST00000350697 MT2AP02795 61 aa6.67□□□□□ -1.34
SEC13-202ENST00000350697 SPTSSBQ8NFR3 76 aa6.67□□□□□ -1.34
SEC13-202ENST00000350697 Q1T7F1 81 aa6.65□□□□□ -1.35
SEC13-202ENST00000350697 LCA10Q71F78 164 aa6.64□□□□□ -1.35
SEC13-202ENST00000350697 MT1FP04733 61 aa6.62□□□□□ -1.35
SEC13-202ENST00000350697 KRTAP10-10P60014 251 aa6.61□□□□□ -1.35
SEC13-202ENST00000350697 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
SEC13-202ENST00000350697 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
SEC13-202ENST00000350697 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
SEC13-202ENST00000350697 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
SEC13-202ENST00000350697 LINC01558Q9Y6Z2 57 aa6.56□□□□□ -1.36
SEC13-202ENST00000350697 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
SEC13-202ENST00000350697 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
SEC13-202ENST00000350697 SEC61GP60059 68 aa6.49□□□□□ -1.37
SEC13-202ENST00000350697 A0A1B0GU69 56 aa6.47□□□□□ -1.37
SEC13-202ENST00000350697 PSPHP1O15172 72 aa6.47□□□□□ -1.37
SEC13-202ENST00000350697 LCE2BO14633 110 aa6.42□□□□□ -1.38
SEC13-202ENST00000350697 Q5VV11 94 aa6.42□□□□□ -1.38
SEC13-202ENST00000350697 H0YAA0 97 aa6.39□□□□□ -1.39
SEC13-202ENST00000350697 USH2AO75445 5202 aa6.39□□□□□ -1.39
SEC13-202ENST00000350697 A6NED7 52 aa6.34□□□□□ -1.39
SEC13-202ENST00000350697 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
SEC13-202ENST00000350697 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
SEC13-202ENST00000350697 CRIPTQ9P021 101 aa6.31□□□□□ -1.4
SEC13-202ENST00000350697 UQCR11O14957 56 aa6.3□□□□□ -1.4
SEC13-202ENST00000350697 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
SEC13-202ENST00000350697 SPRR2GQ9BYE4 73 aa6.29□□□□□ -1.4
SEC13-202ENST00000350697 SSPOA2VEC9 5147 aa6.27□□□□□ -1.41
SEC13-202ENST00000350697 CDC42SE1Q9NRR8 79 aa6.25□□□□□ -1.41
SEC13-202ENST00000350697 A0A1B0GU33 70 aa6.24□□□□□ -1.41
SEC13-202ENST00000350697 P0C880 135 aa6.21□□□□□ -1.42
SEC13-202ENST00000350697 PRO0628Q9UI54 55 aa6.21□□□□□ -1.42
SEC13-202ENST00000350697 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
SEC13-202ENST00000350697 KRTAP19-8Q3LI54 63 aa6.2□□□□□ -1.42
SEC13-202ENST00000350697 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
SEC13-202ENST00000350697 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
SEC13-202ENST00000350697 MT1BP07438 61 aa6.16□□□□□ -1.42
SEC13-202ENST00000350697 KRTAP19-6Q3LI70 58 aa6.16□□□□□ -1.42
SEC13-202ENST00000350697 R4GN34 69 aa6.15□□□□□ -1.43
SEC13-202ENST00000350697 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
SEC13-202ENST00000350697 M0QZ58 72 aa6.1□□□□□ -1.43
SEC13-202ENST00000350697 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
SEC13-202ENST00000350697 KRTAP9-7A8MTY7 169 aa6.05□□□□□ -1.44
SEC13-202ENST00000350697 K7ERS5 55 aa6.03□□□□□ -1.44
SEC13-202ENST00000350697 A8MU10 97 aa6.01□□□□□ -1.45
SEC13-202ENST00000350697 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
SEC13-202ENST00000350697 A6NN06 94 aa5.99□□□□□ -1.45
SEC13-202ENST00000350697 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
SEC13-202ENST00000350697 PMAIP1Q13794 54 aa5.97□□□□□ -1.45
SEC13-202ENST00000350697 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
SEC13-202ENST00000350697 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
SEC13-202ENST00000350697 A0A0D9SG42 100 aa5.92□□□□□ -1.46
SEC13-202ENST00000350697 MACF1Q9UPN3 7388 aaKnown RBP5.89□□□□□ -1.47
SEC13-202ENST00000350697 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
SEC13-202ENST00000350697 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
SEC13-202ENST00000350697 MT1XP80297 61 aa5.84□□□□□ -1.47
SEC13-202ENST00000350697 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
SEC13-202ENST00000350697 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
SEC13-202ENST00000350697 SVIPQ8NHG7 77 aa5.78□□□□□ -1.48
SEC13-202ENST00000350697 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
SEC13-202ENST00000350697 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
SEC13-202ENST00000350697 KTN1-AS1Q86SY8 53 aa5.75□□□□□ -1.49
SEC13-202ENST00000350697 ROMO1P60602 79 aa5.69□□□□□ -1.5
SEC13-202ENST00000350697 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
SEC13-202ENST00000350697 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
SEC13-202ENST00000350697 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
SEC13-202ENST00000350697 KMT2DO14686 5537 aa5.54□□□□□ -1.52
SEC13-202ENST00000350697 KRTAP5-9P26371 169 aa5.52□□□□□ -1.53
SEC13-202ENST00000350697 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
SEC13-202ENST00000350697 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
SEC13-202ENST00000350697 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
SEC13-202ENST00000350697 NEBP20929 6669 aa5.47□□□□□ -1.53
SEC13-202ENST00000350697 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
SEC13-202ENST00000350697 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
SEC13-202ENST00000350697 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.54
SEC13-202ENST00000350697 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.54
SEC13-202ENST00000350697 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
SEC13-202ENST00000350697 TNP1P09430 55 aa5.4□□□□□ -1.54
SEC13-202ENST00000350697 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
SEC13-202ENST00000350697 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
SEC13-202ENST00000350697 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
SEC13-202ENST00000350697 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
SEC13-202ENST00000350697 SPRR2EP22531 72 aa5.29□□□□□ -1.56
SEC13-202ENST00000350697 SPRR2BP35325 72 aa5.29□□□□□ -1.56
SEC13-202ENST00000350697 SPRR2AP35326 72 aa5.29□□□□□ -1.56
SEC13-202ENST00000350697 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms