RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 S4R3F8 94 aa10.99□□□□□ -0.65
CACNB1-201ENST00000344140 RNF213Q63HN8 5207 aa10.98□□□□□ -0.65
CACNB1-201ENST00000344140 SVIPQ8NHG7 77 aa10.98□□□□□ -0.65
CACNB1-201ENST00000344140 LCA10Q71F78 164 aa10.94□□□□□ -0.66
CACNB1-201ENST00000344140 LINC01558Q9Y6Z2 57 aa10.93□□□□□ -0.66
CACNB1-201ENST00000344140 MUC2Q02817 5179 aa10.92□□□□□ -0.66
CACNB1-201ENST00000344140 KRTAP3-3Q9BYR6 98 aa10.89□□□□□ -0.67
CACNB1-201ENST00000344140 KRTAP19-2Q3LHN2 52 aa10.87□□□□□ -0.67
CACNB1-201ENST00000344140 PSPHP1O15172 72 aa10.83□□□□□ -0.68
CACNB1-201ENST00000344140 PRR15LQ9BU68 103 aa10.82□□□□□ -0.68
CACNB1-201ENST00000344140 BRK1Q8WUW1 75 aa10.78□□□□□ -0.68
CACNB1-201ENST00000344140 A0A1B0GU69 56 aa10.78□□□□□ -0.68
CACNB1-201ENST00000344140 PRO0628Q9UI54 55 aa10.78□□□□□ -0.68
CACNB1-201ENST00000344140 CSAG1Q6PB30 78 aa10.76□□□□□ -0.69
CACNB1-201ENST00000344140 SEC61GP60059 68 aa10.74□□□□□ -0.69
CACNB1-201ENST00000344140 Q5VV11 94 aa10.72□□□□□ -0.69
CACNB1-201ENST00000344140 LCE2CQ5TA81 110 aa10.62□□□□□ -0.71
CACNB1-201ENST00000344140 FLGP20930 4061 aaPredicted RBP10.62□□□□□ -0.71
CACNB1-201ENST00000344140 FAT4Q6V0I7 4981 aa10.58□□□□□ -0.72
CACNB1-201ENST00000344140 A6NED7 52 aa10.53□□□□□ -0.72
CACNB1-201ENST00000344140 H0YAA0 97 aa10.53□□□□□ -0.72
CACNB1-201ENST00000344140 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
CACNB1-201ENST00000344140 KRTAP10-6P60371 365 aaPredicted RBP10.49□□□□□ -0.73
CACNB1-201ENST00000344140 ADM2Q7Z4H4 148 aa10.49□□□□□ -0.73
CACNB1-201ENST00000344140 UQCR11O14957 56 aa10.46□□□□□ -0.74
CACNB1-201ENST00000344140 A0A1B0GU33 70 aa10.45□□□□□ -0.74
CACNB1-201ENST00000344140 MT1HP80294 61 aa10.43□□□□□ -0.74
CACNB1-201ENST00000344140 P0C880 135 aa10.4□□□□□ -0.74
CACNB1-201ENST00000344140 M0R2T5 61 aa10.38□□□□□ -0.75
CACNB1-201ENST00000344140 CDC42SE1Q9NRR8 79 aa10.38□□□□□ -0.75
CACNB1-201ENST00000344140 LCE2AQ5TA79 106 aaPredicted RBP10.36□□□□□ -0.75
CACNB1-201ENST00000344140 MIR22HGQ0VDD5 57 aa10.33□□□□□ -0.76
CACNB1-201ENST00000344140 SPATA8Q6RVD6 105 aa10.31□□□□□ -0.76
CACNB1-201ENST00000344140 A8MU10 97 aa10.27□□□□□ -0.77
CACNB1-201ENST00000344140 PMAIP1Q13794 54 aa10.23□□□□□ -0.77
CACNB1-201ENST00000344140 M0QZ58 72 aa10.21□□□□□ -0.78
CACNB1-201ENST00000344140 KRTAP13-4Q3LI77 160 aa10.18□□□□□ -0.78
CACNB1-201ENST00000344140 R4GN34 69 aa10.14□□□□□ -0.79
CACNB1-201ENST00000344140 LORP23490 312 aaPredicted RBP10.1□□□□□ -0.79
CACNB1-201ENST00000344140 CRIPTQ9P021 101 aa10.09□□□□□ -0.79
CACNB1-201ENST00000344140 KRTAP9-8Q9BYQ0 159 aa10.04□□□□□ -0.8
CACNB1-201ENST00000344140 A0A0D9SG42 100 aa10.02□□□□□ -0.81
CACNB1-201ENST00000344140 MT2AP02795 61 aa10.01□□□□□ -0.81
CACNB1-201ENST00000344140 A6NN06 94 aa10□□□□□ -0.81
CACNB1-201ENST00000344140 KRTAP10-10P60014 251 aa9.96□□□□□ -0.82
CACNB1-201ENST00000344140 MT1FP04733 61 aa9.94□□□□□ -0.82
CACNB1-201ENST00000344140 LINC01554Q52M75 96 aa9.92□□□□□ -0.82
CACNB1-201ENST00000344140 K7ERS5 55 aa9.91□□□□□ -0.82
CACNB1-201ENST00000344140 KTN1-AS1Q86SY8 53 aa9.91□□□□□ -0.82
CACNB1-201ENST00000344140 SPRR2GQ9BYE4 73 aa9.84□□□□□ -0.83
CACNB1-201ENST00000344140 KRTAP12-1P59990 96 aa9.82□□□□□ -0.84
CACNB1-201ENST00000344140 SPINT4Q6UDR6 99 aa9.79□□□□□ -0.84
CACNB1-201ENST00000344140 KRTAP12-2P59991 146 aa9.79□□□□□ -0.84
CACNB1-201ENST00000344140 KRTAP19-1Q8IUB9 90 aa9.79□□□□□ -0.84
CACNB1-201ENST00000344140 KRTAP9-3Q9BYQ3 159 aa9.68□□□□□ -0.86
CACNB1-201ENST00000344140 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
CACNB1-201ENST00000344140 KRTAP19-8Q3LI54 63 aa9.57□□□□□ -0.88
CACNB1-201ENST00000344140 PLAC4Q8WY50 150 aa9.54□□□□□ -0.88
CACNB1-201ENST00000344140 KRTAP9-2Q9BYQ4 174 aa9.51□□□□□ -0.89
CACNB1-201ENST00000344140 CAMK2N1Q7Z7J9 78 aa9.5□□□□□ -0.89
CACNB1-201ENST00000344140 ROMO1P60602 79 aa9.46□□□□□ -0.9
CACNB1-201ENST00000344140 PRAC1Q96KF2 57 aa9.44□□□□□ -0.9
CACNB1-201ENST00000344140 LCE2BO14633 110 aa9.43□□□□□ -0.9
CACNB1-201ENST00000344140 MT1BP07438 61 aa9.42□□□□□ -0.9
CACNB1-201ENST00000344140 C10orf95Q9H7T3 257 aa9.29□□□□□ -0.92
CACNB1-201ENST00000344140 USH2AO75445 5202 aa9.26□□□□□ -0.93
CACNB1-201ENST00000344140 FSIP2Q5CZC0 6907 aa9.18□□□□□ -0.94
CACNB1-201ENST00000344140 KRTAP25-1Q3LHN0 102 aa9.14□□□□□ -0.95
CACNB1-201ENST00000344140 MT1XP80297 61 aa9.12□□□□□ -0.95
CACNB1-201ENST00000344140 KRTAP10-5P60370 271 aa9.11□□□□□ -0.95
CACNB1-201ENST00000344140 CRCT1Q9UGL9 99 aa9.11□□□□□ -0.95
CACNB1-201ENST00000344140 PRO2289Q9P1D8 64 aa9.09□□□□□ -0.95
CACNB1-201ENST00000344140 TNP1P09430 55 aa9.05□□□□□ -0.96
CACNB1-201ENST00000344140 SSPOA2VEC9 5147 aa9.04□□□□□ -0.96
CACNB1-201ENST00000344140 KRTAP19-6Q3LI70 58 aa8.99□□□□□ -0.97
CACNB1-201ENST00000344140 KRTAP9-6A0A140TA67 174 aa8.97□□□□□ -0.97
CACNB1-201ENST00000344140 PP632Q6XCG6 107 aa8.8□□□□□ -1
CACNB1-201ENST00000344140 KRTAP23-1A1A580 65 aa8.79□□□□□ -1
CACNB1-201ENST00000344140 KRTAP10-7P60409 375 aaPredicted RBP8.74□□□□□ -1.01
CACNB1-201ENST00000344140 FCGBPQ9Y6R7 5405 aaPredicted RBP8.74□□□□□ -1.01
CACNB1-201ENST00000344140 KRTAP10-12P60413 245 aa8.68□□□□□ -1.02
CACNB1-201ENST00000344140 LCE3AQ5TA76 89 aa8.62□□□□□ -1.03
CACNB1-201ENST00000344140 KRTAP8-1Q8IUC2 63 aa8.47□□□□□ -1.05
CACNB1-201ENST00000344140 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.44□□□□□ -1.06
CACNB1-201ENST00000344140 MACF1Q9UPN3 7388 aaKnown RBP8.42□□□□□ -1.06
CACNB1-201ENST00000344140 KRTAP4-8A0A0G2JLE6 195 aa8.38□□□□□ -1.07
CACNB1-201ENST00000344140 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
CACNB1-201ENST00000344140 KRTAP12-3P60328 96 aa8.3□□□□□ -1.08
CACNB1-201ENST00000344140 KMT2DO14686 5537 aa8.25□□□□□ -1.09
CACNB1-201ENST00000344140 KRTAP19-5Q3LI72 72 aa8.24□□□□□ -1.09
CACNB1-201ENST00000344140 SYNE2Q8WXH0 6885 aaKnown RBP8.21□□□□□ -1.1
CACNB1-201ENST00000344140 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
CACNB1-201ENST00000344140 KRTAP9-7A8MTY7 169 aa8.15□□□□□ -1.11
CACNB1-201ENST00000344140 KRTAP19-7Q3SYF9 63 aa8.13□□□□□ -1.11
CACNB1-201ENST00000344140 KRTAP6-3Q3LI67 103 aa8.1□□□□□ -1.11
CACNB1-201ENST00000344140 MT1EP04732 61 aa8□□□□□ -1.13
CACNB1-201ENST00000344140 KRTAP5-9P26371 169 aa8□□□□□ -1.13
CACNB1-201ENST00000344140 SPRR2FQ96RM1 72 aa7.98□□□□□ -1.13
CACNB1-201ENST00000344140 KRTAP19-4Q3LI73 84 aa7.84□□□□□ -1.15
CACNB1-201ENST00000344140 MT1LQ93083 61 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms