RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 MT1HP80294 61 aa7.12□□□□□ -1.27
HERPUD1-202ENST00000344114 ATP11AUNQ6ZP68 121 aa7.12□□□□□ -1.27
HERPUD1-202ENST00000344114 DMAC1Q96GE9 116 aa7.08□□□□□ -1.28
HERPUD1-202ENST00000344114 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
HERPUD1-202ENST00000344114 H3BS24 57 aa7.06□□□□□ -1.28
HERPUD1-202ENST00000344114 ACYP2P14621 99 aa7.05□□□□□ -1.28
HERPUD1-202ENST00000344114 SPINK7P58062 85 aa7.05□□□□□ -1.28
HERPUD1-202ENST00000344114 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-202ENST00000344114 COA5Q86WW8 74 aa7.05□□□□□ -1.28
HERPUD1-202ENST00000344114 A8MUN3 132 aa7.01□□□□□ -1.29
HERPUD1-202ENST00000344114 C4orf26Q17RF5 130 aa6.96□□□□□ -1.29
HERPUD1-202ENST00000344114 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
HERPUD1-202ENST00000344114 CHKB-CPT1BH3BT56 60 aa6.94□□□□□ -1.3
HERPUD1-202ENST00000344114 FLGP20930 4061 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-202ENST00000344114 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-202ENST00000344114 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
HERPUD1-202ENST00000344114 V9GYY9 64 aa6.92□□□□□ -1.3
HERPUD1-202ENST00000344114 Q1T7F1 81 aa6.91□□□□□ -1.3
HERPUD1-202ENST00000344114 M0R2T5 61 aa6.9□□□□□ -1.31
HERPUD1-202ENST00000344114 MPLKIPQ8TAP9 179 aa6.89□□□□□ -1.31
HERPUD1-202ENST00000344114 KRTAP3-1Q9BYR8 98 aa6.86□□□□□ -1.31
HERPUD1-202ENST00000344114 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
HERPUD1-202ENST00000344114 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
HERPUD1-202ENST00000344114 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
HERPUD1-202ENST00000344114 SSPOA2VEC9 5147 aa6.76□□□□□ -1.33
HERPUD1-202ENST00000344114 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
HERPUD1-202ENST00000344114 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
HERPUD1-202ENST00000344114 PSPHP1O15172 72 aa6.73□□□□□ -1.33
HERPUD1-202ENST00000344114 H1FX-AS1Q4G0G2 97 aa6.72□□□□□ -1.33
HERPUD1-202ENST00000344114 USH2AO75445 5202 aa6.72□□□□□ -1.33
HERPUD1-202ENST00000344114 S4R3F8 94 aa6.71□□□□□ -1.33
HERPUD1-202ENST00000344114 Q5VV11 94 aa6.7□□□□□ -1.34
HERPUD1-202ENST00000344114 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
HERPUD1-202ENST00000344114 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
HERPUD1-202ENST00000344114 A0A1B0GU69 56 aa6.68□□□□□ -1.34
HERPUD1-202ENST00000344114 LCA10Q71F78 164 aa6.66□□□□□ -1.34
HERPUD1-202ENST00000344114 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-202ENST00000344114 SEC61GP60059 68 aa6.63□□□□□ -1.35
HERPUD1-202ENST00000344114 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
HERPUD1-202ENST00000344114 A6NED7 52 aa6.57□□□□□ -1.36
HERPUD1-202ENST00000344114 BRK1Q8WUW1 75 aa6.55□□□□□ -1.36
HERPUD1-202ENST00000344114 MT2AP02795 61 aa6.54□□□□□ -1.36
HERPUD1-202ENST00000344114 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
HERPUD1-202ENST00000344114 UQCR11O14957 56 aa6.5□□□□□ -1.37
HERPUD1-202ENST00000344114 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
HERPUD1-202ENST00000344114 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
HERPUD1-202ENST00000344114 MT1FP04733 61 aa6.48□□□□□ -1.37
HERPUD1-202ENST00000344114 PRO0628Q9UI54 55 aa6.46□□□□□ -1.37
HERPUD1-202ENST00000344114 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-202ENST00000344114 SYNE2Q8WXH0 6885 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-202ENST00000344114 A0A1B0GU33 70 aa6.44□□□□□ -1.38
HERPUD1-202ENST00000344114 H0YAA0 97 aa6.44□□□□□ -1.38
HERPUD1-202ENST00000344114 MIR22HGQ0VDD5 57 aa6.42□□□□□ -1.38
HERPUD1-202ENST00000344114 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
HERPUD1-202ENST00000344114 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
HERPUD1-202ENST00000344114 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
HERPUD1-202ENST00000344114 ADM2Q7Z4H4 148 aa6.39□□□□□ -1.39
HERPUD1-202ENST00000344114 A8MU10 97 aa6.37□□□□□ -1.39
HERPUD1-202ENST00000344114 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
HERPUD1-202ENST00000344114 P0C880 135 aa6.35□□□□□ -1.39
HERPUD1-202ENST00000344114 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.39
HERPUD1-202ENST00000344114 KRTAP4-12Q9BQ66 201 aa6.29□□□□□ -1.4
HERPUD1-202ENST00000344114 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
HERPUD1-202ENST00000344114 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
HERPUD1-202ENST00000344114 M0QZ58 72 aa6.25□□□□□ -1.41
HERPUD1-202ENST00000344114 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
HERPUD1-202ENST00000344114 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
HERPUD1-202ENST00000344114 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
HERPUD1-202ENST00000344114 R4GN34 69 aa6.18□□□□□ -1.42
HERPUD1-202ENST00000344114 A6NN06 94 aa6.16□□□□□ -1.42
HERPUD1-202ENST00000344114 K7ERS5 55 aa6.15□□□□□ -1.43
HERPUD1-202ENST00000344114 A0A0D9SG42 100 aa6.13□□□□□ -1.43
HERPUD1-202ENST00000344114 CRIPTQ9P021 101 aa6.13□□□□□ -1.43
HERPUD1-202ENST00000344114 NEBP20929 6669 aa6.07□□□□□ -1.44
HERPUD1-202ENST00000344114 KRTAP20-1Q3LI63 56 aa6.05□□□□□ -1.44
HERPUD1-202ENST00000344114 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
HERPUD1-202ENST00000344114 MUC12Q9UKN1 5478 aa6.04□□□□□ -1.44
HERPUD1-202ENST00000344114 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
HERPUD1-202ENST00000344114 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
HERPUD1-202ENST00000344114 SPINT4Q6UDR6 99 aa6□□□□□ -1.45
HERPUD1-202ENST00000344114 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
HERPUD1-202ENST00000344114 KTN1-AS1Q86SY8 53 aa5.99□□□□□ -1.45
HERPUD1-202ENST00000344114 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
HERPUD1-202ENST00000344114 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
HERPUD1-202ENST00000344114 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
HERPUD1-202ENST00000344114 KRTAP5-9P26371 169 aa5.9□□□□□ -1.47
HERPUD1-202ENST00000344114 ROMO1P60602 79 aa5.88□□□□□ -1.47
HERPUD1-202ENST00000344114 MT1BP07438 61 aa5.86□□□□□ -1.47
HERPUD1-202ENST00000344114 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
HERPUD1-202ENST00000344114 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
HERPUD1-202ENST00000344114 KMT2DO14686 5537 aa5.8□□□□□ -1.48
HERPUD1-202ENST00000344114 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
HERPUD1-202ENST00000344114 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
HERPUD1-202ENST00000344114 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
HERPUD1-202ENST00000344114 CAMK2N1Q7Z7J9 78 aa5.79□□□□□ -1.48
HERPUD1-202ENST00000344114 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
HERPUD1-202ENST00000344114 PLAC4Q8WY50 150 aa5.78□□□□□ -1.48
HERPUD1-202ENST00000344114 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
HERPUD1-202ENST00000344114 PRAC1Q96KF2 57 aa5.76□□□□□ -1.49
HERPUD1-202ENST00000344114 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms