RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 HRES1P13985 223 aa6.85□□□□□ -1.31
GTF2F2-201ENST00000340473 CHKB-CPT1BH3BT56 60 aa6.84□□□□□ -1.32
GTF2F2-201ENST00000340473 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
GTF2F2-201ENST00000340473 ACYP2P14621 99 aa6.78□□□□□ -1.32
GTF2F2-201ENST00000340473 A6NED7 52 aa6.75□□□□□ -1.33
GTF2F2-201ENST00000340473 DMAC1Q96GE9 116 aa6.74□□□□□ -1.33
GTF2F2-201ENST00000340473 RBM12B-AS1Q9P1G2 102 aa6.74□□□□□ -1.33
GTF2F2-201ENST00000340473 KRTAP19-2Q3LHN2 52 aa6.72□□□□□ -1.33
GTF2F2-201ENST00000340473 COX6B2Q6YFQ2 88 aa6.72□□□□□ -1.33
GTF2F2-201ENST00000340473 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
GTF2F2-201ENST00000340473 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
GTF2F2-201ENST00000340473 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
GTF2F2-201ENST00000340473 CDC42SE1Q9NRR8 79 aa6.7□□□□□ -1.34
GTF2F2-201ENST00000340473 LCA10Q71F78 164 aa6.69□□□□□ -1.34
GTF2F2-201ENST00000340473 A8MU10 97 aa6.68□□□□□ -1.34
GTF2F2-201ENST00000340473 PMAIP1Q13794 54 aa6.68□□□□□ -1.34
GTF2F2-201ENST00000340473 FAT4Q6V0I7 4981 aa6.66□□□□□ -1.34
GTF2F2-201ENST00000340473 LCE2CQ5TA81 110 aa6.65□□□□□ -1.34
GTF2F2-201ENST00000340473 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
GTF2F2-201ENST00000340473 H1FX-AS1Q4G0G2 97 aa6.62□□□□□ -1.35
GTF2F2-201ENST00000340473 A0A1B0GU69 56 aa6.57□□□□□ -1.36
GTF2F2-201ENST00000340473 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
GTF2F2-201ENST00000340473 A6NN06 94 aa6.56□□□□□ -1.36
GTF2F2-201ENST00000340473 KTN1-AS1Q86SY8 53 aa6.55□□□□□ -1.36
GTF2F2-201ENST00000340473 S4R3F8 94 aa6.53□□□□□ -1.36
GTF2F2-201ENST00000340473 MT1HP80294 61 aa6.53□□□□□ -1.36
GTF2F2-201ENST00000340473 UQCR11O14957 56 aa6.47□□□□□ -1.37
GTF2F2-201ENST00000340473 SPATA8Q6RVD6 105 aa6.47□□□□□ -1.37
GTF2F2-201ENST00000340473 SEC61GP60059 68 aa6.45□□□□□ -1.38
GTF2F2-201ENST00000340473 MIR22HGQ0VDD5 57 aa6.43□□□□□ -1.38
GTF2F2-201ENST00000340473 M0R2T5 61 aa6.42□□□□□ -1.38
GTF2F2-201ENST00000340473 LCE2AQ5TA79 106 aaPredicted RBP6.41□□□□□ -1.38
GTF2F2-201ENST00000340473 CSAG1Q6PB30 78 aa6.4□□□□□ -1.38
GTF2F2-201ENST00000340473 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
GTF2F2-201ENST00000340473 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
GTF2F2-201ENST00000340473 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
GTF2F2-201ENST00000340473 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
GTF2F2-201ENST00000340473 H0YAA0 97 aa6.23□□□□□ -1.41
GTF2F2-201ENST00000340473 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
GTF2F2-201ENST00000340473 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
GTF2F2-201ENST00000340473 A0A1B0GU33 70 aa6.22□□□□□ -1.41
GTF2F2-201ENST00000340473 MT2AP02795 61 aa6.22□□□□□ -1.41
GTF2F2-201ENST00000340473 MT1FP04733 61 aa6.19□□□□□ -1.42
GTF2F2-201ENST00000340473 P0C880 135 aa6.18□□□□□ -1.42
GTF2F2-201ENST00000340473 PRAC1Q96KF2 57 aa6.18□□□□□ -1.42
GTF2F2-201ENST00000340473 KRTAP10-10P60014 251 aa6.15□□□□□ -1.43
GTF2F2-201ENST00000340473 K7ERS5 55 aa6.07□□□□□ -1.44
GTF2F2-201ENST00000340473 LINC01554Q52M75 96 aa6.05□□□□□ -1.44
GTF2F2-201ENST00000340473 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
GTF2F2-201ENST00000340473 CRIPTQ9P021 101 aa6.02□□□□□ -1.45
GTF2F2-201ENST00000340473 R4GN34 69 aa6.01□□□□□ -1.45
GTF2F2-201ENST00000340473 M0QZ58 72 aa6□□□□□ -1.45
GTF2F2-201ENST00000340473 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
GTF2F2-201ENST00000340473 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
GTF2F2-201ENST00000340473 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
GTF2F2-201ENST00000340473 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
GTF2F2-201ENST00000340473 LCE2BO14633 110 aa5.91□□□□□ -1.46
GTF2F2-201ENST00000340473 A0A0D9SG42 100 aa5.91□□□□□ -1.46
GTF2F2-201ENST00000340473 ROMO1P60602 79 aa5.88□□□□□ -1.47
GTF2F2-201ENST00000340473 KRTAP19-8Q3LI54 63 aa5.85□□□□□ -1.47
GTF2F2-201ENST00000340473 USH2AO75445 5202 aa5.83□□□□□ -1.48
GTF2F2-201ENST00000340473 MT1BP07438 61 aa5.8□□□□□ -1.48
GTF2F2-201ENST00000340473 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
GTF2F2-201ENST00000340473 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
GTF2F2-201ENST00000340473 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
GTF2F2-201ENST00000340473 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
GTF2F2-201ENST00000340473 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
GTF2F2-201ENST00000340473 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
GTF2F2-201ENST00000340473 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
GTF2F2-201ENST00000340473 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
GTF2F2-201ENST00000340473 MT1XP80297 61 aa5.58□□□□□ -1.52
GTF2F2-201ENST00000340473 KRTAP19-6Q3LI70 58 aa5.58□□□□□ -1.52
GTF2F2-201ENST00000340473 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
GTF2F2-201ENST00000340473 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
GTF2F2-201ENST00000340473 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
GTF2F2-201ENST00000340473 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
GTF2F2-201ENST00000340473 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
GTF2F2-201ENST00000340473 FCGBPQ9Y6R7 5405 aaPredicted RBP5.45□□□□□ -1.54
GTF2F2-201ENST00000340473 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
GTF2F2-201ENST00000340473 H3BS24 57 aa5.4□□□□□ -1.55
GTF2F2-201ENST00000340473 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
GTF2F2-201ENST00000340473 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
GTF2F2-201ENST00000340473 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
GTF2F2-201ENST00000340473 TNP1P09430 55 aa5.29□□□□□ -1.56
GTF2F2-201ENST00000340473 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
GTF2F2-201ENST00000340473 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
GTF2F2-201ENST00000340473 KMT2DO14686 5537 aa5.22□□□□□ -1.57
GTF2F2-201ENST00000340473 NDUFAF8A1L188 74 aa5.2□□□□□ -1.58
GTF2F2-201ENST00000340473 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
GTF2F2-201ENST00000340473 MACF1Q9UPN3 7388 aaKnown RBP5.19□□□□□ -1.58
GTF2F2-201ENST00000340473 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
GTF2F2-201ENST00000340473 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
GTF2F2-201ENST00000340473 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
GTF2F2-201ENST00000340473 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
GTF2F2-201ENST00000340473 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
GTF2F2-201ENST00000340473 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
GTF2F2-201ENST00000340473 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
GTF2F2-201ENST00000340473 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
GTF2F2-201ENST00000340473 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
GTF2F2-201ENST00000340473 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms