RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
MUC1-202ENST00000338684 SYNE2Q8WXH0 6885 aaKnown RBP7.31□□□□□ -1.24
MUC1-202ENST00000338684 TRAV7A0A075B6U4 112 aa7.31□□□□□ -1.24
MUC1-202ENST00000338684 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
MUC1-202ENST00000338684 MACF1Q9UPN3 7388 aaKnown RBP7.29□□□□□ -1.24
MUC1-202ENST00000338684 KRTAP10-10P60014 251 aa7.27□□□□□ -1.25
MUC1-202ENST00000338684 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
MUC1-202ENST00000338684 KLKP1Q107X0 134 aa7.23□□□□□ -1.25
MUC1-202ENST00000338684 SERP2Q8N6R1 65 aa7.21□□□□□ -1.26
MUC1-202ENST00000338684 A8MUN3 132 aa7.16□□□□□ -1.26
MUC1-202ENST00000338684 S4R3F8 94 aa7.16□□□□□ -1.26
MUC1-202ENST00000338684 LCA10Q71F78 164 aa7.1□□□□□ -1.27
MUC1-202ENST00000338684 C20orf197Q8N268 126 aa7.1□□□□□ -1.27
MUC1-202ENST00000338684 SNURFQ9Y675 71 aa7.1□□□□□ -1.27
MUC1-202ENST00000338684 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
MUC1-202ENST00000338684 CSAG1Q6PB30 78 aa7.08□□□□□ -1.28
MUC1-202ENST00000338684 COX7CP15954 63 aa7.07□□□□□ -1.28
MUC1-202ENST00000338684 DMAC1Q96GE9 116 aa7.06□□□□□ -1.28
MUC1-202ENST00000338684 ANAPC13Q9BS18 74 aa7.02□□□□□ -1.29
MUC1-202ENST00000338684 NDUFC1O43677 76 aa7.01□□□□□ -1.29
MUC1-202ENST00000338684 SPANXA2-OT1Q8N9U9 137 aa6.99□□□□□ -1.29
MUC1-202ENST00000338684 ACYP2P14621 99 aa6.98□□□□□ -1.29
MUC1-202ENST00000338684 KRTAP6-3Q3LI67 103 aa6.92□□□□□ -1.3
MUC1-202ENST00000338684 H7BZZ5 65 aa6.87□□□□□ -1.31
MUC1-202ENST00000338684 NEBP20929 6669 aa6.86□□□□□ -1.31
MUC1-202ENST00000338684 CYSTM1Q9H1C7 97 aa6.86□□□□□ -1.31
MUC1-202ENST00000338684 H0YAA0 97 aa6.85□□□□□ -1.31
MUC1-202ENST00000338684 CHKB-CPT1BH3BT56 60 aa6.85□□□□□ -1.31
MUC1-202ENST00000338684 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
MUC1-202ENST00000338684 CCDC179H3BU77 68 aa6.84□□□□□ -1.31
MUC1-202ENST00000338684 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
MUC1-202ENST00000338684 MUC12Q9UKN1 5478 aa6.76□□□□□ -1.33
MUC1-202ENST00000338684 COA5Q86WW8 74 aa6.75□□□□□ -1.33
MUC1-202ENST00000338684 CRIPTQ9P021 101 aa6.75□□□□□ -1.33
MUC1-202ENST00000338684 MT1BP07438 61 aa6.7□□□□□ -1.34
MUC1-202ENST00000338684 ATP5EP56381 51 aaPredicted RBP6.7□□□□□ -1.34
MUC1-202ENST00000338684 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
MUC1-202ENST00000338684 A6NN06 94 aa6.65□□□□□ -1.34
MUC1-202ENST00000338684 P0C880 135 aa6.64□□□□□ -1.35
MUC1-202ENST00000338684 TMEM258P61165 79 aa6.64□□□□□ -1.35
MUC1-202ENST00000338684 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
MUC1-202ENST00000338684 Q5VV11 94 aa6.6□□□□□ -1.35
MUC1-202ENST00000338684 R4GN34 69 aa6.59□□□□□ -1.35
MUC1-202ENST00000338684 KRTAP10-5P60370 271 aa6.56□□□□□ -1.36
MUC1-202ENST00000338684 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
MUC1-202ENST00000338684 M0QZ58 72 aa6.54□□□□□ -1.36
MUC1-202ENST00000338684 SEC61GP60059 68 aa6.54□□□□□ -1.36
MUC1-202ENST00000338684 SERP1Q9Y6X1 66 aa6.51□□□□□ -1.37
MUC1-202ENST00000338684 KRTAP5-9P26371 169 aa6.48□□□□□ -1.37
MUC1-202ENST00000338684 PCP4P48539 62 aa6.48□□□□□ -1.37
MUC1-202ENST00000338684 KMT2DO14686 5537 aa6.46□□□□□ -1.38
MUC1-202ENST00000338684 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
MUC1-202ENST00000338684 A0A1B0GU69 56 aa6.42□□□□□ -1.38
MUC1-202ENST00000338684 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
MUC1-202ENST00000338684 PLAC4Q8WY50 150 aa6.4□□□□□ -1.38
MUC1-202ENST00000338684 A0A1B0GU33 70 aa6.37□□□□□ -1.39
MUC1-202ENST00000338684 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
MUC1-202ENST00000338684 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
MUC1-202ENST00000338684 KRTAP13-4Q3LI77 160 aa6.34□□□□□ -1.39
MUC1-202ENST00000338684 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
MUC1-202ENST00000338684 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
MUC1-202ENST00000338684 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
MUC1-202ENST00000338684 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
MUC1-202ENST00000338684 V9GYY9 64 aa6.24□□□□□ -1.41
MUC1-202ENST00000338684 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
MUC1-202ENST00000338684 A0A0D9SG42 100 aa6.21□□□□□ -1.42
MUC1-202ENST00000338684 RPS28P62857 69 aaKnown RBP6.21□□□□□ -1.42
MUC1-202ENST00000338684 MT1XP80297 61 aa6.21□□□□□ -1.42
MUC1-202ENST00000338684 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
MUC1-202ENST00000338684 Q1T7F1 81 aa6.19□□□□□ -1.42
MUC1-202ENST00000338684 SPRR2EP22531 72 aa6.18□□□□□ -1.42
MUC1-202ENST00000338684 SPRR2BP35325 72 aa6.18□□□□□ -1.42
MUC1-202ENST00000338684 SPRR2AP35326 72 aa6.18□□□□□ -1.42
MUC1-202ENST00000338684 UQCR11O14957 56 aa6.14□□□□□ -1.43
MUC1-202ENST00000338684 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
MUC1-202ENST00000338684 CAMK2N1Q7Z7J9 78 aa6.12□□□□□ -1.43
MUC1-202ENST00000338684 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
MUC1-202ENST00000338684 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
MUC1-202ENST00000338684 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
MUC1-202ENST00000338684 A8MU10 97 aa6.1□□□□□ -1.43
MUC1-202ENST00000338684 PSPHP1O15172 72 aa6.1□□□□□ -1.43
MUC1-202ENST00000338684 LCE1AQ5T7P2 110 aa6.1□□□□□ -1.43
MUC1-202ENST00000338684 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
MUC1-202ENST00000338684 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
MUC1-202ENST00000338684 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
MUC1-202ENST00000338684 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
MUC1-202ENST00000338684 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
MUC1-202ENST00000338684 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
MUC1-202ENST00000338684 MIR22HGQ0VDD5 57 aa6.02□□□□□ -1.45
MUC1-202ENST00000338684 SPRR2DP22532 72 aa5.97□□□□□ -1.45
MUC1-202ENST00000338684 A6NED7 52 aa5.94□□□□□ -1.46
MUC1-202ENST00000338684 KRTAP10-7P60409 375 aaPredicted RBP5.94□□□□□ -1.46
MUC1-202ENST00000338684 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
MUC1-202ENST00000338684 K7ERS5 55 aa5.88□□□□□ -1.47
MUC1-202ENST00000338684 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
MUC1-202ENST00000338684 GPR98Q8WXG9 6306 aa5.8□□□□□ -1.48
MUC1-202ENST00000338684 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
MUC1-202ENST00000338684 CDC42SE1Q9NRR8 79 aa5.75□□□□□ -1.49
MUC1-202ENST00000338684 TNP1P09430 55 aa5.74□□□□□ -1.49
MUC1-202ENST00000338684 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms