RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 HERC1Q15751 4861 aa5.16□□□□□ -1.58
ARHGEF3-202ENST00000338458 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
ARHGEF3-202ENST00000338458 LCA10Q71F78 164 aa5.11□□□□□ -1.59
ARHGEF3-202ENST00000338458 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
ARHGEF3-202ENST00000338458 SEC61GP60059 68 aa5.1□□□□□ -1.59
ARHGEF3-202ENST00000338458 SEC61BP60468 96 aaKnown RBP5.09□□□□□ -1.59
ARHGEF3-202ENST00000338458 S4R3F8 94 aa5.08□□□□□ -1.6
ARHGEF3-202ENST00000338458 RBM12B-AS1Q9P1G2 102 aa5.08□□□□□ -1.6
ARHGEF3-202ENST00000338458 KRTAP4-1Q9BYQ7 146 aa5.07□□□□□ -1.6
ARHGEF3-202ENST00000338458 MUC2Q02817 5179 aa5.07□□□□□ -1.6
ARHGEF3-202ENST00000338458 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
ARHGEF3-202ENST00000338458 H1FX-AS1Q4G0G2 97 aa5.05□□□□□ -1.6
ARHGEF3-202ENST00000338458 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
ARHGEF3-202ENST00000338458 UQCR11O14957 56 aa5.01□□□□□ -1.61
ARHGEF3-202ENST00000338458 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
ARHGEF3-202ENST00000338458 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
ARHGEF3-202ENST00000338458 SPATA8Q6RVD6 105 aa4.98□□□□□ -1.61
ARHGEF3-202ENST00000338458 MUC17Q685J3 4493 aa4.98□□□□□ -1.61
ARHGEF3-202ENST00000338458 A0A1B0GU33 70 aa4.97□□□□□ -1.61
ARHGEF3-202ENST00000338458 PMAIP1Q13794 54 aa4.96□□□□□ -1.61
ARHGEF3-202ENST00000338458 CSAG1Q6PB30 78 aa4.94□□□□□ -1.62
ARHGEF3-202ENST00000338458 P0C880 135 aa4.93□□□□□ -1.62
ARHGEF3-202ENST00000338458 H0YAA0 97 aa4.92□□□□□ -1.62
ARHGEF3-202ENST00000338458 ADM2Q7Z4H4 148 aa4.92□□□□□ -1.62
ARHGEF3-202ENST00000338458 KRTAP10-6P60371 365 aaPredicted RBP4.91□□□□□ -1.62
ARHGEF3-202ENST00000338458 RNF213Q63HN8 5207 aa4.9□□□□□ -1.62
ARHGEF3-202ENST00000338458 KRTAP3-2Q9BYR7 98 aa4.9□□□□□ -1.63
ARHGEF3-202ENST00000338458 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
ARHGEF3-202ENST00000338458 A0A0D9SG42 100 aa4.89□□□□□ -1.63
ARHGEF3-202ENST00000338458 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
ARHGEF3-202ENST00000338458 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
ARHGEF3-202ENST00000338458 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.63
ARHGEF3-202ENST00000338458 A6NN06 94 aa4.83□□□□□ -1.64
ARHGEF3-202ENST00000338458 LINC01554Q52M75 96 aa4.79□□□□□ -1.64
ARHGEF3-202ENST00000338458 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
ARHGEF3-202ENST00000338458 M0QZ58 72 aa4.75□□□□□ -1.65
ARHGEF3-202ENST00000338458 SPINT4Q6UDR6 99 aa4.73□□□□□ -1.65
ARHGEF3-202ENST00000338458 R4GN34 69 aa4.73□□□□□ -1.65
ARHGEF3-202ENST00000338458 M0R2T5 61 aa4.73□□□□□ -1.65
ARHGEF3-202ENST00000338458 K7ERS5 55 aa4.72□□□□□ -1.65
ARHGEF3-202ENST00000338458 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
ARHGEF3-202ENST00000338458 FLGP20930 4061 aaPredicted RBP4.72□□□□□ -1.65
ARHGEF3-202ENST00000338458 LCE2CQ5TA81 110 aa4.71□□□□□ -1.66
ARHGEF3-202ENST00000338458 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
ARHGEF3-202ENST00000338458 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
ARHGEF3-202ENST00000338458 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
ARHGEF3-202ENST00000338458 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
ARHGEF3-202ENST00000338458 MT1HP80294 61 aa4.63□□□□□ -1.67
ARHGEF3-202ENST00000338458 ROMO1P60602 79 aa4.54□□□□□ -1.68
ARHGEF3-202ENST00000338458 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
ARHGEF3-202ENST00000338458 MT2AP02795 61 aa4.48□□□□□ -1.69
ARHGEF3-202ENST00000338458 MT1FP04733 61 aa4.48□□□□□ -1.69
ARHGEF3-202ENST00000338458 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
ARHGEF3-202ENST00000338458 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
ARHGEF3-202ENST00000338458 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
ARHGEF3-202ENST00000338458 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
ARHGEF3-202ENST00000338458 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
ARHGEF3-202ENST00000338458 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
ARHGEF3-202ENST00000338458 PLAC4Q8WY50 150 aa4.36□□□□□ -1.71
ARHGEF3-202ENST00000338458 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
ARHGEF3-202ENST00000338458 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
ARHGEF3-202ENST00000338458 USH2AO75445 5202 aa4.25□□□□□ -1.73
ARHGEF3-202ENST00000338458 MT1BP07438 61 aa4.24□□□□□ -1.73
ARHGEF3-202ENST00000338458 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
ARHGEF3-202ENST00000338458 TNP1P09430 55 aa4.21□□□□□ -1.74
ARHGEF3-202ENST00000338458 LCE2BO14633 110 aa4.2□□□□□ -1.74
ARHGEF3-202ENST00000338458 FSIP2Q5CZC0 6907 aa4.18□□□□□ -1.74
ARHGEF3-202ENST00000338458 MT1XP80297 61 aa4.14□□□□□ -1.75
ARHGEF3-202ENST00000338458 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
ARHGEF3-202ENST00000338458 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
ARHGEF3-202ENST00000338458 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
ARHGEF3-202ENST00000338458 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
ARHGEF3-202ENST00000338458 LCE2DQ5TA82 110 aaPredicted RBP4.03□□□□□ -1.76
ARHGEF3-202ENST00000338458 PRO2289Q9P1D8 64 aa4.03□□□□□ -1.76
ARHGEF3-202ENST00000338458 KMT2DO14686 5537 aa4.01□□□□□ -1.77
ARHGEF3-202ENST00000338458 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
ARHGEF3-202ENST00000338458 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
ARHGEF3-202ENST00000338458 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
ARHGEF3-202ENST00000338458 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
ARHGEF3-202ENST00000338458 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
ARHGEF3-202ENST00000338458 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
ARHGEF3-202ENST00000338458 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
ARHGEF3-202ENST00000338458 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
ARHGEF3-202ENST00000338458 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
ARHGEF3-202ENST00000338458 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
ARHGEF3-202ENST00000338458 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
ARHGEF3-202ENST00000338458 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
ARHGEF3-202ENST00000338458 H3BS24 57 aa3.76□□□□□ -1.81
ARHGEF3-202ENST00000338458 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
ARHGEF3-202ENST00000338458 KRTAP9-2Q9BYQ4 174 aa3.69□□□□□ -1.82
ARHGEF3-202ENST00000338458 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
ARHGEF3-202ENST00000338458 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
ARHGEF3-202ENST00000338458 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
ARHGEF3-202ENST00000338458 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
ARHGEF3-202ENST00000338458 MUC12Q9UKN1 5478 aa3.63□□□□□ -1.83
ARHGEF3-202ENST00000338458 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
ARHGEF3-202ENST00000338458 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
ARHGEF3-202ENST00000338458 MT1EP04732 61 aa3.6□□□□□ -1.83
ARHGEF3-202ENST00000338458 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.84
ARHGEF3-202ENST00000338458 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms