RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 COA5Q86WW8 74 aa7.49□□□□□ -1.21
CDK5RAP3-201ENST00000338399 ACYP2P14621 99 aa7.49□□□□□ -1.21
CDK5RAP3-201ENST00000338399 PRR15LQ9BU68 103 aa7.49□□□□□ -1.21
CDK5RAP3-201ENST00000338399 CHKB-CPT1BH3BT56 60 aa7.47□□□□□ -1.21
CDK5RAP3-201ENST00000338399 RBM12B-AS1Q9P1G2 102 aa7.47□□□□□ -1.21
CDK5RAP3-201ENST00000338399 A8MU10 97 aa7.46□□□□□ -1.22
CDK5RAP3-201ENST00000338399 LCA10Q71F78 164 aa7.41□□□□□ -1.22
CDK5RAP3-201ENST00000338399 MUC2Q02817 5179 aa7.4□□□□□ -1.22
CDK5RAP3-201ENST00000338399 LINC01558Q9Y6Z2 57 aa7.4□□□□□ -1.23
CDK5RAP3-201ENST00000338399 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
CDK5RAP3-201ENST00000338399 A6NED7 52 aa7.37□□□□□ -1.23
CDK5RAP3-201ENST00000338399 H1FX-AS1Q4G0G2 97 aa7.37□□□□□ -1.23
CDK5RAP3-201ENST00000338399 KTN1-AS1Q86SY8 53 aa7.36□□□□□ -1.23
CDK5RAP3-201ENST00000338399 CDC42SE1Q9NRR8 79 aa7.36□□□□□ -1.23
CDK5RAP3-201ENST00000338399 A6NN06 94 aa7.34□□□□□ -1.23
CDK5RAP3-201ENST00000338399 KRTAP19-2Q3LHN2 52 aa7.34□□□□□ -1.23
CDK5RAP3-201ENST00000338399 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
CDK5RAP3-201ENST00000338399 SPTSSBQ8NFR3 76 aa7.32□□□□□ -1.24
CDK5RAP3-201ENST00000338399 S4R3F8 94 aa7.3□□□□□ -1.24
CDK5RAP3-201ENST00000338399 KRTAP3-3Q9BYR6 98 aa7.25□□□□□ -1.25
CDK5RAP3-201ENST00000338399 LCE2CQ5TA81 110 aa7.21□□□□□ -1.25
CDK5RAP3-201ENST00000338399 FLGP20930 4061 aaPredicted RBP7.18□□□□□ -1.26
CDK5RAP3-201ENST00000338399 CSAG1Q6PB30 78 aa7.15□□□□□ -1.27
CDK5RAP3-201ENST00000338399 FAT4Q6V0I7 4981 aa7.12□□□□□ -1.27
CDK5RAP3-201ENST00000338399 MT1HP80294 61 aa7.08□□□□□ -1.28
CDK5RAP3-201ENST00000338399 A0A1B0GU69 56 aa7.04□□□□□ -1.28
CDK5RAP3-201ENST00000338399 SPATA8Q6RVD6 105 aa7.04□□□□□ -1.28
CDK5RAP3-201ENST00000338399 M0R2T5 61 aa7.02□□□□□ -1.29
CDK5RAP3-201ENST00000338399 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
CDK5RAP3-201ENST00000338399 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
CDK5RAP3-201ENST00000338399 H0YAA0 97 aa6.94□□□□□ -1.3
CDK5RAP3-201ENST00000338399 UQCR11O14957 56 aa6.94□□□□□ -1.3
CDK5RAP3-201ENST00000338399 KRTAP10-6P60371 365 aaPredicted RBP6.94□□□□□ -1.3
CDK5RAP3-201ENST00000338399 MIR22HGQ0VDD5 57 aa6.94□□□□□ -1.3
CDK5RAP3-201ENST00000338399 PRAC1Q96KF2 57 aa6.94□□□□□ -1.3
CDK5RAP3-201ENST00000338399 P0C880 135 aa6.92□□□□□ -1.3
CDK5RAP3-201ENST00000338399 A0A1B0GU33 70 aa6.85□□□□□ -1.31
CDK5RAP3-201ENST00000338399 LCE2AQ5TA79 106 aaPredicted RBP6.85□□□□□ -1.31
CDK5RAP3-201ENST00000338399 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
CDK5RAP3-201ENST00000338399 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
CDK5RAP3-201ENST00000338399 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
CDK5RAP3-201ENST00000338399 MT2AP02795 61 aa6.77□□□□□ -1.33
CDK5RAP3-201ENST00000338399 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
CDK5RAP3-201ENST00000338399 MT1FP04733 61 aa6.74□□□□□ -1.33
CDK5RAP3-201ENST00000338399 R4GN34 69 aa6.73□□□□□ -1.33
CDK5RAP3-201ENST00000338399 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
CDK5RAP3-201ENST00000338399 M0QZ58 72 aa6.72□□□□□ -1.33
CDK5RAP3-201ENST00000338399 CRIPTQ9P021 101 aa6.68□□□□□ -1.34
CDK5RAP3-201ENST00000338399 A0A0D9SG42 100 aa6.64□□□□□ -1.35
CDK5RAP3-201ENST00000338399 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
CDK5RAP3-201ENST00000338399 SPRR2GQ9BYE4 73 aa6.58□□□□□ -1.36
CDK5RAP3-201ENST00000338399 KRTAP25-1Q3LHN0 102 aa6.56□□□□□ -1.36
CDK5RAP3-201ENST00000338399 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
CDK5RAP3-201ENST00000338399 SPINT4Q6UDR6 99 aa6.49□□□□□ -1.37
CDK5RAP3-201ENST00000338399 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
CDK5RAP3-201ENST00000338399 KRTAP12-2P59991 146 aa6.47□□□□□ -1.37
CDK5RAP3-201ENST00000338399 H3BS24 57 aa6.45□□□□□ -1.38
CDK5RAP3-201ENST00000338399 K7ERS5 55 aa6.44□□□□□ -1.38
CDK5RAP3-201ENST00000338399 KRTAP19-8Q3LI54 63 aa6.42□□□□□ -1.38
CDK5RAP3-201ENST00000338399 ROMO1P60602 79 aa6.41□□□□□ -1.38
CDK5RAP3-201ENST00000338399 LCE2BO14633 110 aa6.4□□□□□ -1.39
CDK5RAP3-201ENST00000338399 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
CDK5RAP3-201ENST00000338399 MT1BP07438 61 aa6.35□□□□□ -1.39
CDK5RAP3-201ENST00000338399 CAMK2N1Q7Z7J9 78 aa6.29□□□□□ -1.4
CDK5RAP3-201ENST00000338399 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
CDK5RAP3-201ENST00000338399 USH2AO75445 5202 aa6.21□□□□□ -1.42
CDK5RAP3-201ENST00000338399 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.43
CDK5RAP3-201ENST00000338399 MT1XP80297 61 aa6.13□□□□□ -1.43
CDK5RAP3-201ENST00000338399 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
CDK5RAP3-201ENST00000338399 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
CDK5RAP3-201ENST00000338399 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
CDK5RAP3-201ENST00000338399 KRTAP15-1Q3LI76 137 aa6.05□□□□□ -1.44
CDK5RAP3-201ENST00000338399 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
CDK5RAP3-201ENST00000338399 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
CDK5RAP3-201ENST00000338399 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
CDK5RAP3-201ENST00000338399 TNP1P09430 55 aa5.96□□□□□ -1.45
CDK5RAP3-201ENST00000338399 NDUFAF8A1L188 74 aa5.9□□□□□ -1.46
CDK5RAP3-201ENST00000338399 KRTAP10-7P60409 375 aaPredicted RBP5.9□□□□□ -1.47
CDK5RAP3-201ENST00000338399 CRCT1Q9UGL9 99 aa5.83□□□□□ -1.48
CDK5RAP3-201ENST00000338399 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
CDK5RAP3-201ENST00000338399 FCGBPQ9Y6R7 5405 aaPredicted RBP5.79□□□□□ -1.48
CDK5RAP3-201ENST00000338399 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
CDK5RAP3-201ENST00000338399 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
CDK5RAP3-201ENST00000338399 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
CDK5RAP3-201ENST00000338399 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
CDK5RAP3-201ENST00000338399 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
CDK5RAP3-201ENST00000338399 KMT2DO14686 5537 aa5.68□□□□□ -1.5
CDK5RAP3-201ENST00000338399 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
CDK5RAP3-201ENST00000338399 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
CDK5RAP3-201ENST00000338399 MACF1Q9UPN3 7388 aaKnown RBP5.55□□□□□ -1.52
CDK5RAP3-201ENST00000338399 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
CDK5RAP3-201ENST00000338399 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
CDK5RAP3-201ENST00000338399 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
CDK5RAP3-201ENST00000338399 LUZP6Q538Z0 58 aa5.42□□□□□ -1.54
CDK5RAP3-201ENST00000338399 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
CDK5RAP3-201ENST00000338399 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
CDK5RAP3-201ENST00000338399 MT1EP04732 61 aa5.37□□□□□ -1.55
CDK5RAP3-201ENST00000338399 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
CDK5RAP3-201ENST00000338399 SPRR2FQ96RM1 72 aa5.35□□□□□ -1.55
CDK5RAP3-201ENST00000338399 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms