RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 COX7CP15954 63 aa5.13□□□□□ -1.59
CSMD2-202ENST00000338325 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
CSMD2-202ENST00000338325 C14orf132Q9NPU4 83 aa5.12□□□□□ -1.59
CSMD2-202ENST00000338325 ATP5EP2Q5VTU8 51 aa5.11□□□□□ -1.59
CSMD2-202ENST00000338325 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
CSMD2-202ENST00000338325 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
CSMD2-202ENST00000338325 S4R3F8 94 aa5.08□□□□□ -1.6
CSMD2-202ENST00000338325 CSAG1Q6PB30 78 aa5.07□□□□□ -1.6
CSMD2-202ENST00000338325 SMIM20Q8N5G0 67 aa5.07□□□□□ -1.6
CSMD2-202ENST00000338325 RPS28P62857 69 aaKnown RBP5.07□□□□□ -1.6
CSMD2-202ENST00000338325 SERP2Q8N6R1 65 aa5.07□□□□□ -1.6
CSMD2-202ENST00000338325 KLKP1Q107X0 134 aa5.05□□□□□ -1.6
CSMD2-202ENST00000338325 HCG22E2RYF7 251 aa5.04□□□□□ -1.6
CSMD2-202ENST00000338325 LCA10Q71F78 164 aa5.04□□□□□ -1.6
CSMD2-202ENST00000338325 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
CSMD2-202ENST00000338325 TMEM258P61165 79 aa5.03□□□□□ -1.6
CSMD2-202ENST00000338325 UBL5Q9BZL1 73 aa5.03□□□□□ -1.6
CSMD2-202ENST00000338325 BPY2O14599 106 aa5.02□□□□□ -1.61
CSMD2-202ENST00000338325 CASC2Q6XLA1 102 aa5.02□□□□□ -1.61
CSMD2-202ENST00000338325 CXCL6P80162 114 aa5.02□□□□□ -1.61
CSMD2-202ENST00000338325 C1orf64Q8NEQ6 169 aa5□□□□□ -1.61
CSMD2-202ENST00000338325 A0A087WVE0 104 aa4.99□□□□□ -1.61
CSMD2-202ENST00000338325 Q8N9L7 120 aa4.99□□□□□ -1.61
CSMD2-202ENST00000338325 SPRR2EP22531 72 aa4.98□□□□□ -1.61
CSMD2-202ENST00000338325 SPRR2BP35325 72 aa4.98□□□□□ -1.61
CSMD2-202ENST00000338325 SPRR2AP35326 72 aa4.98□□□□□ -1.61
CSMD2-202ENST00000338325 SPRR2FQ96RM1 72 aa4.97□□□□□ -1.61
CSMD2-202ENST00000338325 CRIPTQ9P021 101 aa4.97□□□□□ -1.61
CSMD2-202ENST00000338325 TRAV7A0A075B6U4 112 aa4.96□□□□□ -1.62
CSMD2-202ENST00000338325 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
CSMD2-202ENST00000338325 KRTAP3-3Q9BYR6 98 aa4.93□□□□□ -1.62
CSMD2-202ENST00000338325 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
CSMD2-202ENST00000338325 KRTAP2-1Q9BYU5 128 aa4.91□□□□□ -1.62
CSMD2-202ENST00000338325 NDUFC1O43677 76 aa4.9□□□□□ -1.63
CSMD2-202ENST00000338325 C20orf197Q8N268 126 aa4.89□□□□□ -1.63
CSMD2-202ENST00000338325 H7BZZ5 65 aa4.88□□□□□ -1.63
CSMD2-202ENST00000338325 SERP1Q9Y6X1 66 aa4.88□□□□□ -1.63
CSMD2-202ENST00000338325 ATP5EP56381 51 aaPredicted RBP4.87□□□□□ -1.63
CSMD2-202ENST00000338325 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
CSMD2-202ENST00000338325 PRO2289Q9P1D8 64 aa4.87□□□□□ -1.63
CSMD2-202ENST00000338325 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
CSMD2-202ENST00000338325 MT1XP80297 61 aa4.83□□□□□ -1.64
CSMD2-202ENST00000338325 TP53AIP1Q9HCN2 124 aa4.82□□□□□ -1.64
CSMD2-202ENST00000338325 SPRR2DP22532 72 aa4.82□□□□□ -1.64
CSMD2-202ENST00000338325 SMIM26A0A096LP01 95 aa4.81□□□□□ -1.64
CSMD2-202ENST00000338325 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
CSMD2-202ENST00000338325 H0YAA0 97 aa4.8□□□□□ -1.64
CSMD2-202ENST00000338325 A8MUN3 132 aa4.79□□□□□ -1.64
CSMD2-202ENST00000338325 SNURFQ9Y675 71 aa4.79□□□□□ -1.64
CSMD2-202ENST00000338325 KRTAP12-2P59991 146 aa4.78□□□□□ -1.64
CSMD2-202ENST00000338325 CYP4F30PQ9H0H9 118 aa4.78□□□□□ -1.64
CSMD2-202ENST00000338325 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
CSMD2-202ENST00000338325 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
CSMD2-202ENST00000338325 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.66
CSMD2-202ENST00000338325 LOC101927531A0A1B0GV80 90 aa4.71□□□□□ -1.66
CSMD2-202ENST00000338325 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
CSMD2-202ENST00000338325 KRTAP4-8Q9BYQ9 185 aa4.71□□□□□ -1.66
CSMD2-202ENST00000338325 PRO0628Q9UI54 55 aa4.71□□□□□ -1.66
CSMD2-202ENST00000338325 KRTAP3-2Q9BYR7 98 aa4.7□□□□□ -1.66
CSMD2-202ENST00000338325 TRAV22A0A0B4J277 110 aa4.69□□□□□ -1.66
CSMD2-202ENST00000338325 H3BPC8 53 aa4.66□□□□□ -1.66
CSMD2-202ENST00000338325 R4GN34 69 aa4.64□□□□□ -1.67
CSMD2-202ENST00000338325 Q1T7F1 81 aa4.63□□□□□ -1.67
CSMD2-202ENST00000338325 GPR98Q8WXG9 6306 aa4.63□□□□□ -1.67
CSMD2-202ENST00000338325 MP68P56378 58 aa4.62□□□□□ -1.67
CSMD2-202ENST00000338325 SPANXA2-OT1Q8N9U9 137 aa4.62□□□□□ -1.67
CSMD2-202ENST00000338325 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
CSMD2-202ENST00000338325 V9GYY9 64 aa4.6□□□□□ -1.67
CSMD2-202ENST00000338325 M0QZ58 72 aa4.59□□□□□ -1.67
CSMD2-202ENST00000338325 H0Y9P7 68 aa4.58□□□□□ -1.68
CSMD2-202ENST00000338325 P0C880 135 aa4.58□□□□□ -1.68
CSMD2-202ENST00000338325 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
CSMD2-202ENST00000338325 BRK1Q8WUW1 75 aa4.56□□□□□ -1.68
CSMD2-202ENST00000338325 LINC00208Q96KT6 92 aa4.56□□□□□ -1.68
CSMD2-202ENST00000338325 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
CSMD2-202ENST00000338325 PSPHP1O15172 72 aa4.46□□□□□ -1.7
CSMD2-202ENST00000338325 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
CSMD2-202ENST00000338325 COA5Q86WW8 74 aa4.44□□□□□ -1.7
CSMD2-202ENST00000338325 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
CSMD2-202ENST00000338325 LINC01558Q9Y6Z2 57 aa4.41□□□□□ -1.7
CSMD2-202ENST00000338325 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
CSMD2-202ENST00000338325 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
CSMD2-202ENST00000338325 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
CSMD2-202ENST00000338325 DMAC1Q96GE9 116 aa4.38□□□□□ -1.71
CSMD2-202ENST00000338325 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
CSMD2-202ENST00000338325 CDC42SE1Q9NRR8 79 aa4.36□□□□□ -1.71
CSMD2-202ENST00000338325 A6NED7 52 aa4.34□□□□□ -1.71
CSMD2-202ENST00000338325 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
CSMD2-202ENST00000338325 ACYP2P14621 99 aa4.32□□□□□ -1.72
CSMD2-202ENST00000338325 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
CSMD2-202ENST00000338325 SEC61GP60059 68 aa4.31□□□□□ -1.72
CSMD2-202ENST00000338325 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
CSMD2-202ENST00000338325 H3BS24 57 aa4.31□□□□□ -1.72
CSMD2-202ENST00000338325 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
CSMD2-202ENST00000338325 A8MU10 97 aa4.3□□□□□ -1.72
CSMD2-202ENST00000338325 MT1EP04732 61 aa4.3□□□□□ -1.72
CSMD2-202ENST00000338325 SPTSSBQ8NFR3 76 aa4.26□□□□□ -1.73
CSMD2-202ENST00000338325 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
CSMD2-202ENST00000338325 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
CSMD2-202ENST00000338325 MT4P47944 62 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms