RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 MT2AP02795 61 aa7.31□□□□□ -1.24
SEC13-201ENST00000337354 NDUFC1O43677 76 aa7.29□□□□□ -1.24
SEC13-201ENST00000337354 KRTAP3-3Q9BYR6 98 aa7.29□□□□□ -1.24
SEC13-201ENST00000337354 ANAPC13Q9BS18 74 aa7.27□□□□□ -1.25
SEC13-201ENST00000337354 SPANXA2-OT1Q8N9U9 137 aa7.26□□□□□ -1.25
SEC13-201ENST00000337354 ACYP2P14621 99 aa7.25□□□□□ -1.25
SEC13-201ENST00000337354 KRTAP10-10P60014 251 aa7.25□□□□□ -1.25
SEC13-201ENST00000337354 MT1FP04733 61 aa7.24□□□□□ -1.25
SEC13-201ENST00000337354 CRCT1Q9UGL9 99 aa7.24□□□□□ -1.25
SEC13-201ENST00000337354 FSIP2Q5CZC0 6907 aa7.16□□□□□ -1.26
SEC13-201ENST00000337354 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
SEC13-201ENST00000337354 H0YAA0 97 aa7.13□□□□□ -1.27
SEC13-201ENST00000337354 H7BZZ5 65 aa7.13□□□□□ -1.27
SEC13-201ENST00000337354 SPTSSBQ8NFR3 76 aa7.1□□□□□ -1.27
SEC13-201ENST00000337354 CHKB-CPT1BH3BT56 60 aa7.09□□□□□ -1.27
SEC13-201ENST00000337354 CYSTM1Q9H1C7 97 aa7.09□□□□□ -1.27
SEC13-201ENST00000337354 CCDC179H3BU77 68 aa7.08□□□□□ -1.28
SEC13-201ENST00000337354 USH2AO75445 5202 aa7.04□□□□□ -1.28
SEC13-201ENST00000337354 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
SEC13-201ENST00000337354 LCE2BO14633 110 aa7.02□□□□□ -1.29
SEC13-201ENST00000337354 ADM2Q7Z4H4 148 aa7.02□□□□□ -1.29
SEC13-201ENST00000337354 COA5Q86WW8 74 aa6.99□□□□□ -1.29
SEC13-201ENST00000337354 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
SEC13-201ENST00000337354 SSPOA2VEC9 5147 aa6.95□□□□□ -1.3
SEC13-201ENST00000337354 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
SEC13-201ENST00000337354 ATP5EP56381 51 aaPredicted RBP6.94□□□□□ -1.3
SEC13-201ENST00000337354 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.31
SEC13-201ENST00000337354 P0C880 135 aa6.88□□□□□ -1.31
SEC13-201ENST00000337354 TMEM258P61165 79 aa6.88□□□□□ -1.31
SEC13-201ENST00000337354 KRTAP19-8Q3LI54 63 aa6.83□□□□□ -1.32
SEC13-201ENST00000337354 R4GN34 69 aa6.83□□□□□ -1.32
SEC13-201ENST00000337354 Q5VV11 94 aa6.81□□□□□ -1.32
SEC13-201ENST00000337354 SEC61GP60059 68 aa6.79□□□□□ -1.32
SEC13-201ENST00000337354 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
SEC13-201ENST00000337354 M0QZ58 72 aa6.77□□□□□ -1.33
SEC13-201ENST00000337354 SERP1Q9Y6X1 66 aa6.76□□□□□ -1.33
SEC13-201ENST00000337354 MT1BP07438 61 aa6.75□□□□□ -1.33
SEC13-201ENST00000337354 KRTAP19-6Q3LI70 58 aa6.75□□□□□ -1.33
SEC13-201ENST00000337354 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
SEC13-201ENST00000337354 PCP4P48539 62 aa6.71□□□□□ -1.33
SEC13-201ENST00000337354 A0A1B0GU69 56 aa6.66□□□□□ -1.34
SEC13-201ENST00000337354 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
SEC13-201ENST00000337354 KRTAP9-7A8MTY7 169 aa6.63□□□□□ -1.35
SEC13-201ENST00000337354 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
SEC13-201ENST00000337354 A0A1B0GU33 70 aa6.61□□□□□ -1.35
SEC13-201ENST00000337354 PRR15LQ9BU68 103 aa6.59□□□□□ -1.35
SEC13-201ENST00000337354 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
SEC13-201ENST00000337354 A6NN06 94 aa6.57□□□□□ -1.36
SEC13-201ENST00000337354 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
SEC13-201ENST00000337354 KRTAP10-5P60370 271 aa6.55□□□□□ -1.36
SEC13-201ENST00000337354 PRO2289Q9P1D8 64 aa6.5□□□□□ -1.37
SEC13-201ENST00000337354 SPATA8Q6RVD6 105 aa6.49□□□□□ -1.37
SEC13-201ENST00000337354 V9GYY9 64 aa6.48□□□□□ -1.37
SEC13-201ENST00000337354 RPS28P62857 69 aaKnown RBP6.47□□□□□ -1.37
SEC13-201ENST00000337354 MACF1Q9UPN3 7388 aaKnown RBP6.45□□□□□ -1.38
SEC13-201ENST00000337354 SMIM26A0A096LP01 95 aa6.44□□□□□ -1.38
SEC13-201ENST00000337354 A0A0D9SG42 100 aa6.43□□□□□ -1.38
SEC13-201ENST00000337354 MT1XP80297 61 aa6.43□□□□□ -1.38
SEC13-201ENST00000337354 Q1T7F1 81 aa6.43□□□□□ -1.38
SEC13-201ENST00000337354 UQCR11O14957 56 aa6.38□□□□□ -1.39
SEC13-201ENST00000337354 SPINT4Q6UDR6 99 aa6.33□□□□□ -1.4
SEC13-201ENST00000337354 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
SEC13-201ENST00000337354 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
SEC13-201ENST00000337354 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
SEC13-201ENST00000337354 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
SEC13-201ENST00000337354 A8MU10 97 aa6.31□□□□□ -1.4
SEC13-201ENST00000337354 PSPHP1O15172 72 aa6.31□□□□□ -1.4
SEC13-201ENST00000337354 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
SEC13-201ENST00000337354 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
SEC13-201ENST00000337354 A6NED7 52 aa6.14□□□□□ -1.43
SEC13-201ENST00000337354 KRTAP10-7P60409 375 aaPredicted RBP6.13□□□□□ -1.43
SEC13-201ENST00000337354 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
SEC13-201ENST00000337354 K7ERS5 55 aa6.09□□□□□ -1.43
SEC13-201ENST00000337354 KRTAP5-9P26371 169 aa6.07□□□□□ -1.44
SEC13-201ENST00000337354 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
SEC13-201ENST00000337354 KMT2DO14686 5537 aa6.04□□□□□ -1.44
SEC13-201ENST00000337354 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
SEC13-201ENST00000337354 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
SEC13-201ENST00000337354 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
SEC13-201ENST00000337354 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
SEC13-201ENST00000337354 C10orf95Q9H7T3 257 aa6□□□□□ -1.45
SEC13-201ENST00000337354 TNP1P09430 55 aa5.96□□□□□ -1.45
SEC13-201ENST00000337354 NEBP20929 6669 aa5.96□□□□□ -1.46
SEC13-201ENST00000337354 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
SEC13-201ENST00000337354 MDN1Q9NU22 5596 aa5.92□□□□□ -1.46
SEC13-201ENST00000337354 SPRR2EP22531 72 aa5.89□□□□□ -1.47
SEC13-201ENST00000337354 SPRR2BP35325 72 aa5.89□□□□□ -1.47
SEC13-201ENST00000337354 SPRR2AP35326 72 aa5.89□□□□□ -1.47
SEC13-201ENST00000337354 KRTAP20-1Q3LI63 56 aa5.84□□□□□ -1.47
SEC13-201ENST00000337354 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
SEC13-201ENST00000337354 LCE1AQ5T7P2 110 aa5.77□□□□□ -1.49
SEC13-201ENST00000337354 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
SEC13-201ENST00000337354 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
SEC13-201ENST00000337354 ROMO1P60602 79 aa5.72□□□□□ -1.49
SEC13-201ENST00000337354 SPRR2DP22532 72 aa5.69□□□□□ -1.5
SEC13-201ENST00000337354 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
SEC13-201ENST00000337354 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
SEC13-201ENST00000337354 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
SEC13-201ENST00000337354 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
SEC13-201ENST00000337354 MT1EP04732 61 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms