RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 LINC00304Q8N9R0 145 aa6.3□□□□□ -1.4
APOBEC3B-201ENST00000333467 PSPHP1O15172 72 aa6.3□□□□□ -1.4
APOBEC3B-201ENST00000333467 PCOTHQ58A44 107 aa6.3□□□□□ -1.4
APOBEC3B-201ENST00000333467 KRTAP13-3Q3SY46 172 aa6.29□□□□□ -1.4
APOBEC3B-201ENST00000333467 A8MUN3 132 aa6.28□□□□□ -1.4
APOBEC3B-201ENST00000333467 Q5VV11 94 aa6.28□□□□□ -1.4
APOBEC3B-201ENST00000333467 Q75L30 129 aa6.28□□□□□ -1.4
APOBEC3B-201ENST00000333467 LINC00313P59037 77 aa6.27□□□□□ -1.41
APOBEC3B-201ENST00000333467 RETNLBQ9BQ08 111 aa6.27□□□□□ -1.41
APOBEC3B-201ENST00000333467 NOTCH2NLQ7Z3S9 236 aa6.26□□□□□ -1.41
APOBEC3B-201ENST00000333467 LINC01558Q9Y6Z2 57 aa6.26□□□□□ -1.41
APOBEC3B-201ENST00000333467 PRR15LQ9BU68 103 aa6.25□□□□□ -1.41
APOBEC3B-201ENST00000333467 ACYP2P14621 99 aa6.23□□□□□ -1.41
APOBEC3B-201ENST00000333467 CHKB-CPT1BH3BT56 60 aa6.22□□□□□ -1.41
APOBEC3B-201ENST00000333467 HRES1P13985 223 aa6.22□□□□□ -1.41
APOBEC3B-201ENST00000333467 Q5W150 140 aa6.21□□□□□ -1.42
APOBEC3B-201ENST00000333467 H3BS24 57 aa6.2□□□□□ -1.42
APOBEC3B-201ENST00000333467 RPS29P62273 56 aaKnown RBP6.2□□□□□ -1.42
APOBEC3B-201ENST00000333467 SPINK1P00995 79 aa6.19□□□□□ -1.42
APOBEC3B-201ENST00000333467 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
APOBEC3B-201ENST00000333467 SPAG11AQ6PDA7 123 aa6.19□□□□□ -1.42
APOBEC3B-201ENST00000333467 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
APOBEC3B-201ENST00000333467 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
APOBEC3B-201ENST00000333467 ATP11AUNQ6ZP68 121 aa6.16□□□□□ -1.42
APOBEC3B-201ENST00000333467 MUC2Q02817 5179 aa6.16□□□□□ -1.42
APOBEC3B-201ENST00000333467 A6NED7 52 aa6.15□□□□□ -1.42
APOBEC3B-201ENST00000333467 KRTAP16-1A8MUX0 517 aa6.15□□□□□ -1.42
APOBEC3B-201ENST00000333467 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
APOBEC3B-201ENST00000333467 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
APOBEC3B-201ENST00000333467 LCA10Q71F78 164 aa6.08□□□□□ -1.44
APOBEC3B-201ENST00000333467 MUC17Q685J3 4493 aa6.06□□□□□ -1.44
APOBEC3B-201ENST00000333467 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
APOBEC3B-201ENST00000333467 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
APOBEC3B-201ENST00000333467 A0A1B0GU69 56 aa6.01□□□□□ -1.45
APOBEC3B-201ENST00000333467 SPTSSBQ8NFR3 76 aa6.01□□□□□ -1.45
APOBEC3B-201ENST00000333467 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
APOBEC3B-201ENST00000333467 A6NN06 94 aa5.99□□□□□ -1.45
APOBEC3B-201ENST00000333467 SPINK7P58062 85 aa5.99□□□□□ -1.45
APOBEC3B-201ENST00000333467 A8MU10 97 aa5.99□□□□□ -1.45
APOBEC3B-201ENST00000333467 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
APOBEC3B-201ENST00000333467 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
APOBEC3B-201ENST00000333467 C20orf166-AS1Q96NR2 134 aa5.95□□□□□ -1.46
APOBEC3B-201ENST00000333467 A8MUU9 505 aa5.94□□□□□ -1.46
APOBEC3B-201ENST00000333467 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
APOBEC3B-201ENST00000333467 UQCR11O14957 56 aa5.94□□□□□ -1.46
APOBEC3B-201ENST00000333467 SPATA8Q6RVD6 105 aa5.94□□□□□ -1.46
APOBEC3B-201ENST00000333467 C9orf92A6NGG3 77 aa5.92□□□□□ -1.46
APOBEC3B-201ENST00000333467 SEC61GP60059 68 aa5.9□□□□□ -1.46
APOBEC3B-201ENST00000333467 MIR22HGQ0VDD5 57 aa5.88□□□□□ -1.47
APOBEC3B-201ENST00000333467 RPL37P61927 97 aaKnown RBP5.8□□□□□ -1.48
APOBEC3B-201ENST00000333467 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
APOBEC3B-201ENST00000333467 RBM12B-AS1Q9P1G2 102 aa5.76□□□□□ -1.49
APOBEC3B-201ENST00000333467 COX6B2Q6YFQ2 88 aa5.75□□□□□ -1.49
APOBEC3B-201ENST00000333467 MT1HP80294 61 aa5.73□□□□□ -1.49
APOBEC3B-201ENST00000333467 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
APOBEC3B-201ENST00000333467 A0A1B0GU33 70 aa5.69□□□□□ -1.5
APOBEC3B-201ENST00000333467 H1FX-AS1Q4G0G2 97 aa5.67□□□□□ -1.5
APOBEC3B-201ENST00000333467 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
APOBEC3B-201ENST00000333467 H0YAA0 97 aa5.63□□□□□ -1.51
APOBEC3B-201ENST00000333467 K7ERS5 55 aa5.61□□□□□ -1.51
APOBEC3B-201ENST00000333467 M0R2T5 61 aa5.61□□□□□ -1.51
APOBEC3B-201ENST00000333467 KRTAP10-6P60371 365 aaPredicted RBP5.61□□□□□ -1.51
APOBEC3B-201ENST00000333467 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
APOBEC3B-201ENST00000333467 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
APOBEC3B-201ENST00000333467 LINC01554Q52M75 96 aa5.53□□□□□ -1.52
APOBEC3B-201ENST00000333467 S4R3F8 94 aa5.53□□□□□ -1.52
APOBEC3B-201ENST00000333467 ADM2Q7Z4H4 148 aa5.53□□□□□ -1.52
APOBEC3B-201ENST00000333467 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
APOBEC3B-201ENST00000333467 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
APOBEC3B-201ENST00000333467 CSAG1Q6PB30 78 aa5.48□□□□□ -1.53
APOBEC3B-201ENST00000333467 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
APOBEC3B-201ENST00000333467 ROMO1P60602 79 aa5.39□□□□□ -1.55
APOBEC3B-201ENST00000333467 M0QZ58 72 aa5.35□□□□□ -1.55
APOBEC3B-201ENST00000333467 MT2AP02795 61 aa5.34□□□□□ -1.55
APOBEC3B-201ENST00000333467 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
APOBEC3B-201ENST00000333467 MT1FP04733 61 aa5.31□□□□□ -1.56
APOBEC3B-201ENST00000333467 P0C880 135 aa5.3□□□□□ -1.56
APOBEC3B-201ENST00000333467 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.3□□□□□ -1.56
APOBEC3B-201ENST00000333467 A0A0D9SG42 100 aa5.28□□□□□ -1.56
APOBEC3B-201ENST00000333467 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
APOBEC3B-201ENST00000333467 KRTAP10-10P60014 251 aa5.25□□□□□ -1.57
APOBEC3B-201ENST00000333467 USH2AO75445 5202 aa5.22□□□□□ -1.57
APOBEC3B-201ENST00000333467 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
APOBEC3B-201ENST00000333467 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
APOBEC3B-201ENST00000333467 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
APOBEC3B-201ENST00000333467 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
APOBEC3B-201ENST00000333467 SPINT4Q6UDR6 99 aa5.15□□□□□ -1.58
APOBEC3B-201ENST00000333467 R4GN34 69 aa5.13□□□□□ -1.59
APOBEC3B-201ENST00000333467 FCGBPQ9Y6R7 5405 aaPredicted RBP5.08□□□□□ -1.6
APOBEC3B-201ENST00000333467 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
APOBEC3B-201ENST00000333467 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
APOBEC3B-201ENST00000333467 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.61
APOBEC3B-201ENST00000333467 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
APOBEC3B-201ENST00000333467 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
APOBEC3B-201ENST00000333467 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
APOBEC3B-201ENST00000333467 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
APOBEC3B-201ENST00000333467 MT1BP07438 61 aa4.86□□□□□ -1.63
APOBEC3B-201ENST00000333467 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
APOBEC3B-201ENST00000333467 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
APOBEC3B-201ENST00000333467 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms