RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 PSPHP1O15172 72 aa10.94□□□□□ -0.66
TOP1MT-201ENST00000329245 LINC01558Q9Y6Z2 57 aa10.92□□□□□ -0.66
TOP1MT-201ENST00000329245 PRR15LQ9BU68 103 aa10.89□□□□□ -0.67
TOP1MT-201ENST00000329245 H1FX-AS1Q4G0G2 97 aa10.88□□□□□ -0.67
TOP1MT-201ENST00000329245 MUC2Q02817 5179 aa10.86□□□□□ -0.67
TOP1MT-201ENST00000329245 Q5VV11 94 aa10.85□□□□□ -0.67
TOP1MT-201ENST00000329245 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
TOP1MT-201ENST00000329245 S4R3F8 94 aa10.81□□□□□ -0.68
TOP1MT-201ENST00000329245 LCA10Q71F78 164 aa10.79□□□□□ -0.68
TOP1MT-201ENST00000329245 UBR4Q5T4S7 5183 aa10.76□□□□□ -0.69
TOP1MT-201ENST00000329245 A0A1B0GU69 56 aa10.73□□□□□ -0.69
TOP1MT-201ENST00000329245 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
TOP1MT-201ENST00000329245 KRTAP19-2Q3LHN2 52 aa10.68□□□□□ -0.7
TOP1MT-201ENST00000329245 RNF213Q63HN8 5207 aa10.63□□□□□ -0.71
TOP1MT-201ENST00000329245 PMAIP1Q13794 54 aa10.62□□□□□ -0.71
TOP1MT-201ENST00000329245 A6NED7 52 aa10.61□□□□□ -0.71
TOP1MT-201ENST00000329245 SEC61GP60059 68 aa10.61□□□□□ -0.71
TOP1MT-201ENST00000329245 CSAG1Q6PB30 78 aa10.58□□□□□ -0.72
TOP1MT-201ENST00000329245 CDC42SE1Q9NRR8 79 aa10.57□□□□□ -0.72
TOP1MT-201ENST00000329245 A8MU10 97 aa10.54□□□□□ -0.72
TOP1MT-201ENST00000329245 LCE2CQ5TA81 110 aa10.46□□□□□ -0.74
TOP1MT-201ENST00000329245 UQCR11O14957 56 aa10.42□□□□□ -0.74
TOP1MT-201ENST00000329245 FLGP20930 4061 aaPredicted RBP10.41□□□□□ -0.74
TOP1MT-201ENST00000329245 KTN1-AS1Q86SY8 53 aa10.4□□□□□ -0.74
TOP1MT-201ENST00000329245 A6NN06 94 aa10.38□□□□□ -0.75
TOP1MT-201ENST00000329245 FAT4Q6V0I7 4981 aa10.38□□□□□ -0.75
TOP1MT-201ENST00000329245 KRTAP10-6P60371 365 aaPredicted RBP10.36□□□□□ -0.75
TOP1MT-201ENST00000329245 KRTAP3-2Q9BYR7 98 aa10.36□□□□□ -0.75
TOP1MT-201ENST00000329245 A0A1B0GU33 70 aa10.35□□□□□ -0.75
TOP1MT-201ENST00000329245 ADM2Q7Z4H4 148 aa10.35□□□□□ -0.75
TOP1MT-201ENST00000329245 MIR22HGQ0VDD5 57 aa10.32□□□□□ -0.76
TOP1MT-201ENST00000329245 SPATA8Q6RVD6 105 aa10.3□□□□□ -0.76
TOP1MT-201ENST00000329245 H0YAA0 97 aa10.29□□□□□ -0.76
TOP1MT-201ENST00000329245 P0C880 135 aa10.28□□□□□ -0.76
TOP1MT-201ENST00000329245 MT1HP80294 61 aa10.28□□□□□ -0.76
TOP1MT-201ENST00000329245 M0R2T5 61 aa10.27□□□□□ -0.77
TOP1MT-201ENST00000329245 KRTAP13-4Q3LI77 160 aa10.13□□□□□ -0.79
TOP1MT-201ENST00000329245 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
TOP1MT-201ENST00000329245 R4GN34 69 aa10□□□□□ -0.81
TOP1MT-201ENST00000329245 M0QZ58 72 aa9.99□□□□□ -0.81
TOP1MT-201ENST00000329245 A0A0D9SG42 100 aa9.95□□□□□ -0.82
TOP1MT-201ENST00000329245 KRTAP9-8Q9BYQ0 159 aa9.88□□□□□ -0.83
TOP1MT-201ENST00000329245 MT2AP02795 61 aa9.86□□□□□ -0.83
TOP1MT-201ENST00000329245 CRIPTQ9P021 101 aa9.86□□□□□ -0.83
TOP1MT-201ENST00000329245 LINC01554Q52M75 96 aa9.84□□□□□ -0.83
TOP1MT-201ENST00000329245 LCE2AQ5TA79 106 aaPredicted RBP9.84□□□□□ -0.83
TOP1MT-201ENST00000329245 KRTAP10-10P60014 251 aa9.83□□□□□ -0.84
TOP1MT-201ENST00000329245 MT1FP04733 61 aa9.81□□□□□ -0.84
TOP1MT-201ENST00000329245 K7ERS5 55 aa9.8□□□□□ -0.84
TOP1MT-201ENST00000329245 PRAC1Q96KF2 57 aa9.77□□□□□ -0.84
TOP1MT-201ENST00000329245 KRTAP12-1P59990 96 aa9.73□□□□□ -0.85
TOP1MT-201ENST00000329245 KRTAP12-2P59991 146 aa9.73□□□□□ -0.85
TOP1MT-201ENST00000329245 SPINT4Q6UDR6 99 aa9.7□□□□□ -0.86
TOP1MT-201ENST00000329245 SPRR2GQ9BYE4 73 aa9.64□□□□□ -0.87
TOP1MT-201ENST00000329245 KRTAP19-1Q8IUB9 90 aa9.63□□□□□ -0.87
TOP1MT-201ENST00000329245 KRTAP9-3Q9BYQ3 159 aa9.52□□□□□ -0.89
TOP1MT-201ENST00000329245 ROMO1P60602 79 aa9.44□□□□□ -0.9
TOP1MT-201ENST00000329245 PLAC4Q8WY50 150 aa9.4□□□□□ -0.9
TOP1MT-201ENST00000329245 KRTAP19-8Q3LI54 63 aa9.37□□□□□ -0.91
TOP1MT-201ENST00000329245 CAMK2N1Q7Z7J9 78 aa9.37□□□□□ -0.91
TOP1MT-201ENST00000329245 KRTAP25-1Q3LHN0 102 aa9.36□□□□□ -0.91
TOP1MT-201ENST00000329245 LCE2BO14633 110 aa9.27□□□□□ -0.93
TOP1MT-201ENST00000329245 MT1BP07438 61 aa9.26□□□□□ -0.93
TOP1MT-201ENST00000329245 C10orf95Q9H7T3 257 aa9.2□□□□□ -0.94
TOP1MT-201ENST00000329245 USH2AO75445 5202 aa9.03□□□□□ -0.96
TOP1MT-201ENST00000329245 MT1XP80297 61 aa8.97□□□□□ -0.97
TOP1MT-201ENST00000329245 KRTAP10-5P60370 271 aa8.97□□□□□ -0.97
TOP1MT-201ENST00000329245 LCE2DQ5TA82 110 aaPredicted RBP8.94□□□□□ -0.98
TOP1MT-201ENST00000329245 PRO2289Q9P1D8 64 aa8.92□□□□□ -0.98
TOP1MT-201ENST00000329245 TNP1P09430 55 aa8.89□□□□□ -0.99
TOP1MT-201ENST00000329245 FSIP2Q5CZC0 6907 aa8.81□□□□□ -1
TOP1MT-201ENST00000329245 SSPOA2VEC9 5147 aa8.75□□□□□ -1.01
TOP1MT-201ENST00000329245 H3BS24 57 aa8.73□□□□□ -1.01
TOP1MT-201ENST00000329245 KRTAP19-6Q3LI70 58 aa8.68□□□□□ -1.02
TOP1MT-201ENST00000329245 PP632Q6XCG6 107 aa8.66□□□□□ -1.02
TOP1MT-201ENST00000329245 KRTAP10-7P60409 375 aaPredicted RBP8.64□□□□□ -1.03
TOP1MT-201ENST00000329245 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
TOP1MT-201ENST00000329245 KRTAP23-1A1A580 65 aa8.59□□□□□ -1.03
TOP1MT-201ENST00000329245 KRTAP10-12P60413 245 aa8.54□□□□□ -1.04
TOP1MT-201ENST00000329245 KRTAP15-1Q3LI76 137 aa8.52□□□□□ -1.05
TOP1MT-201ENST00000329245 LCE3AQ5TA76 89 aa8.5□□□□□ -1.05
TOP1MT-201ENST00000329245 FCGBPQ9Y6R7 5405 aaPredicted RBP8.37□□□□□ -1.07
TOP1MT-201ENST00000329245 KMT2DO14686 5537 aa8.34□□□□□ -1.07
TOP1MT-201ENST00000329245 CRCT1Q9UGL9 99 aa8.33□□□□□ -1.08
TOP1MT-201ENST00000329245 KRTAP4-8A0A0G2JLE6 195 aa8.32□□□□□ -1.08
TOP1MT-201ENST00000329245 KRTAP4-8Q9BYQ9 185 aa8.32□□□□□ -1.08
TOP1MT-201ENST00000329245 KRTAP8-1Q8IUC2 63 aa8.3□□□□□ -1.08
TOP1MT-201ENST00000329245 NDUFAF8A1L188 74 aa8.26□□□□□ -1.09
TOP1MT-201ENST00000329245 KRTAP12-3P60328 96 aa8.17□□□□□ -1.1
TOP1MT-201ENST00000329245 KRTAP19-5Q3LI72 72 aa8.13□□□□□ -1.11
TOP1MT-201ENST00000329245 MACF1Q9UPN3 7388 aaKnown RBP8.02□□□□□ -1.13
TOP1MT-201ENST00000329245 KRTAP19-7Q3SYF9 63 aa8.01□□□□□ -1.13
TOP1MT-201ENST00000329245 KRTAP9-6A0A140TA67 174 aa7.95□□□□□ -1.14
TOP1MT-201ENST00000329245 MT1EP04732 61 aa7.86□□□□□ -1.15
TOP1MT-201ENST00000329245 SYNE2Q8WXH0 6885 aaKnown RBP7.83□□□□□ -1.16
TOP1MT-201ENST00000329245 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
TOP1MT-201ENST00000329245 SPRR2FQ96RM1 72 aa7.77□□□□□ -1.17
TOP1MT-201ENST00000329245 SPRR5A0A1B0GTR4 108 aa7.76□□□□□ -1.17
TOP1MT-201ENST00000329245 MT1LQ93083 61 aa7.71□□□□□ -1.18
TOP1MT-201ENST00000329245 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms