RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 MPLKIPQ8TAP9 179 aa11.98□□□□□ -0.49
TNFSF12-202ENST00000322272 KRTAP9-2Q9BYQ4 174 aa11.96□□□□□ -0.5
TNFSF12-202ENST00000322272 KRTAP3-1Q9BYR8 98 aa11.96□□□□□ -0.5
TNFSF12-202ENST00000322272 M0R2T5 61 aa11.92□□□□□ -0.5
TNFSF12-202ENST00000322272 FLGP20930 4061 aaPredicted RBP11.9□□□□□ -0.5
TNFSF12-202ENST00000322272 CHKB-CPT1BH3BT56 60 aa11.87□□□□□ -0.51
TNFSF12-202ENST00000322272 KRTAP10-6P60371 365 aaPredicted RBP11.82□□□□□ -0.52
TNFSF12-202ENST00000322272 LORP23490 312 aaPredicted RBP11.8□□□□□ -0.52
TNFSF12-202ENST00000322272 H1FX-AS1Q4G0G2 97 aa11.8□□□□□ -0.52
TNFSF12-202ENST00000322272 SMIM26A0A096LP01 95 aa11.74□□□□□ -0.53
TNFSF12-202ENST00000322272 LCE2DQ5TA82 110 aaPredicted RBP11.71□□□□□ -0.53
TNFSF12-202ENST00000322272 S4R3F8 94 aa11.71□□□□□ -0.53
TNFSF12-202ENST00000322272 SPTSSBQ8NFR3 76 aa11.69□□□□□ -0.54
TNFSF12-202ENST00000322272 LCA10Q71F78 164 aa11.64□□□□□ -0.55
TNFSF12-202ENST00000322272 V9GYY9 64 aa11.56□□□□□ -0.56
TNFSF12-202ENST00000322272 KRTAP3-3Q9BYR6 98 aa11.55□□□□□ -0.56
TNFSF12-202ENST00000322272 Q1T7F1 81 aa11.53□□□□□ -0.56
TNFSF12-202ENST00000322272 FSIP2Q5CZC0 6907 aa11.49□□□□□ -0.57
TNFSF12-202ENST00000322272 KRTAP9-6A0A140TA67 174 aa11.48□□□□□ -0.57
TNFSF12-202ENST00000322272 LINC01558Q9Y6Z2 57 aa11.47□□□□□ -0.57
TNFSF12-202ENST00000322272 KRTAP9-8Q9BYQ0 159 aa11.46□□□□□ -0.57
TNFSF12-202ENST00000322272 CSAG1Q6PB30 78 aa11.46□□□□□ -0.58
TNFSF12-202ENST00000322272 PRR15LQ9BU68 103 aa11.36□□□□□ -0.59
TNFSF12-202ENST00000322272 A0A1B0GU69 56 aa11.35□□□□□ -0.59
TNFSF12-202ENST00000322272 SEC61GP60059 68 aa11.34□□□□□ -0.59
TNFSF12-202ENST00000322272 CRCT1Q9UGL9 99 aa11.34□□□□□ -0.59
TNFSF12-202ENST00000322272 MT2AP02795 61 aa11.33□□□□□ -0.6
TNFSF12-202ENST00000322272 PSPHP1O15172 72 aa11.31□□□□□ -0.6
TNFSF12-202ENST00000322272 MT1FP04733 61 aa11.24□□□□□ -0.61
TNFSF12-202ENST00000322272 KRTAP10-10P60014 251 aa11.21□□□□□ -0.61
TNFSF12-202ENST00000322272 Q5VV11 94 aa11.21□□□□□ -0.61
TNFSF12-202ENST00000322272 H0YAA0 97 aa11.2□□□□□ -0.62
TNFSF12-202ENST00000322272 ADM2Q7Z4H4 148 aa11.14□□□□□ -0.63
TNFSF12-202ENST00000322272 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
TNFSF12-202ENST00000322272 USH2AO75445 5202 aa11.1□□□□□ -0.63
TNFSF12-202ENST00000322272 KRTAP9-3Q9BYQ3 159 aa11.09□□□□□ -0.63
TNFSF12-202ENST00000322272 P0C880 135 aa11.04□□□□□ -0.64
TNFSF12-202ENST00000322272 A0A1B0GU33 70 aa11.02□□□□□ -0.65
TNFSF12-202ENST00000322272 LCE2BO14633 110 aa11.01□□□□□ -0.65
TNFSF12-202ENST00000322272 A6NED7 52 aa11□□□□□ -0.65
TNFSF12-202ENST00000322272 UQCR11O14957 56 aa10.99□□□□□ -0.65
TNFSF12-202ENST00000322272 SSPOA2VEC9 5147 aa10.97□□□□□ -0.65
TNFSF12-202ENST00000322272 MIR22HGQ0VDD5 57 aa10.84□□□□□ -0.67
TNFSF12-202ENST00000322272 M0QZ58 72 aa10.81□□□□□ -0.68
TNFSF12-202ENST00000322272 SPATA8Q6RVD6 105 aa10.8□□□□□ -0.68
TNFSF12-202ENST00000322272 BRK1Q8WUW1 75 aa10.8□□□□□ -0.68
TNFSF12-202ENST00000322272 CDC42SE1Q9NRR8 79 aa10.8□□□□□ -0.68
TNFSF12-202ENST00000322272 CRIPTQ9P021 101 aa10.78□□□□□ -0.68
TNFSF12-202ENST00000322272 R4GN34 69 aa10.78□□□□□ -0.68
TNFSF12-202ENST00000322272 KRTAP13-4Q3LI77 160 aa10.76□□□□□ -0.69
TNFSF12-202ENST00000322272 KRTAP19-1Q8IUB9 90 aa10.73□□□□□ -0.69
TNFSF12-202ENST00000322272 FCGBPQ9Y6R7 5405 aaPredicted RBP10.66□□□□□ -0.7
TNFSF12-202ENST00000322272 A8MU10 97 aa10.64□□□□□ -0.71
TNFSF12-202ENST00000322272 A0A0D9SG42 100 aa10.58□□□□□ -0.72
TNFSF12-202ENST00000322272 KRTAP19-6Q3LI70 58 aa10.58□□□□□ -0.72
TNFSF12-202ENST00000322272 LINC01554Q52M75 96 aa10.55□□□□□ -0.72
TNFSF12-202ENST00000322272 SPRR2GQ9BYE4 73 aa10.55□□□□□ -0.72
TNFSF12-202ENST00000322272 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.54□□□□□ -0.72
TNFSF12-202ENST00000322272 PRO0628Q9UI54 55 aa10.51□□□□□ -0.73
TNFSF12-202ENST00000322272 K7ERS5 55 aa10.43□□□□□ -0.74
TNFSF12-202ENST00000322272 A6NN06 94 aa10.4□□□□□ -0.74
TNFSF12-202ENST00000322272 KRTAP12-1P59990 96 aa10.39□□□□□ -0.75
TNFSF12-202ENST00000322272 KRTAP19-8Q3LI54 63 aa10.37□□□□□ -0.75
TNFSF12-202ENST00000322272 MT1BP07438 61 aa10.36□□□□□ -0.75
TNFSF12-202ENST00000322272 SPINT4Q6UDR6 99 aa10.36□□□□□ -0.75
TNFSF12-202ENST00000322272 MACF1Q9UPN3 7388 aaKnown RBP10.35□□□□□ -0.75
TNFSF12-202ENST00000322272 KRTAP9-7A8MTY7 169 aa10.35□□□□□ -0.75
TNFSF12-202ENST00000322272 KRTAP12-2P59991 146 aa10.34□□□□□ -0.75
TNFSF12-202ENST00000322272 PMAIP1Q13794 54 aa10.2□□□□□ -0.78
TNFSF12-202ENST00000322272 PLAC4Q8WY50 150 aa10.19□□□□□ -0.78
TNFSF12-202ENST00000322272 SYNE2Q8WXH0 6885 aaKnown RBP10.19□□□□□ -0.78
TNFSF12-202ENST00000322272 CAMK2N1Q7Z7J9 78 aa10.1□□□□□ -0.79
TNFSF12-202ENST00000322272 KRTAP10-5P60370 271 aa10.08□□□□□ -0.8
TNFSF12-202ENST00000322272 ROMO1P60602 79 aa9.94□□□□□ -0.82
TNFSF12-202ENST00000322272 KRTAP6-3Q3LI67 103 aa9.91□□□□□ -0.82
TNFSF12-202ENST00000322272 PRO2289Q9P1D8 64 aa9.86□□□□□ -0.83
TNFSF12-202ENST00000322272 C10orf95Q9H7T3 257 aa9.82□□□□□ -0.84
TNFSF12-202ENST00000322272 MT1XP80297 61 aa9.78□□□□□ -0.84
TNFSF12-202ENST00000322272 KTN1-AS1Q86SY8 53 aa9.77□□□□□ -0.85
TNFSF12-202ENST00000322272 KRTAP25-1Q3LHN0 102 aa9.61□□□□□ -0.87
TNFSF12-202ENST00000322272 MUC12Q9UKN1 5478 aa9.61□□□□□ -0.87
TNFSF12-202ENST00000322272 TNP1P09430 55 aa9.6□□□□□ -0.87
TNFSF12-202ENST00000322272 KMT2DO14686 5537 aa9.56□□□□□ -0.88
TNFSF12-202ENST00000322272 KRTAP5-9P26371 169 aa9.54□□□□□ -0.88
TNFSF12-202ENST00000322272 SVIPQ8NHG7 77 aa9.54□□□□□ -0.88
TNFSF12-202ENST00000322272 PRAC1Q96KF2 57 aa9.53□□□□□ -0.88
TNFSF12-202ENST00000322272 NEBP20929 6669 aa9.51□□□□□ -0.89
TNFSF12-202ENST00000322272 MDN1Q9NU22 5596 aa9.37□□□□□ -0.91
TNFSF12-202ENST00000322272 KRTAP8-1Q8IUC2 63 aa9.37□□□□□ -0.91
TNFSF12-202ENST00000322272 KRTAP10-7P60409 375 aaPredicted RBP9.35□□□□□ -0.91
TNFSF12-202ENST00000322272 SPRR2FQ96RM1 72 aa9.34□□□□□ -0.91
TNFSF12-202ENST00000322272 KRTAP4-8A0A0G2JLE6 195 aa9.31□□□□□ -0.92
TNFSF12-202ENST00000322272 KRTAP4-8Q9BYQ9 185 aa9.31□□□□□ -0.92
TNFSF12-202ENST00000322272 KRTAP10-12P60413 245 aa9.29□□□□□ -0.92
TNFSF12-202ENST00000322272 KRTAP23-1A1A580 65 aa9.28□□□□□ -0.92
TNFSF12-202ENST00000322272 PP632Q6XCG6 107 aa9.28□□□□□ -0.92
TNFSF12-202ENST00000322272 LCE3AQ5TA76 89 aa9.16□□□□□ -0.94
TNFSF12-202ENST00000322272 SPRR2EP22531 72 aa9.15□□□□□ -0.94
TNFSF12-202ENST00000322272 SPRR2BP35325 72 aa9.15□□□□□ -0.94
TNFSF12-202ENST00000322272 SPRR2AP35326 72 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms