RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 SVIPQ8NHG7 77 aa8.8□□□□□ -1
SSR4-201ENST00000320857 LPAP08519 4548 aa8.74□□□□□ -1.01
SSR4-201ENST00000320857 SEC61GP60059 68 aa8.71□□□□□ -1.02
SSR4-201ENST00000320857 LRP2P98164 4655 aa8.7□□□□□ -1.02
SSR4-201ENST00000320857 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
SSR4-201ENST00000320857 LCA10Q71F78 164 aa8.67□□□□□ -1.02
SSR4-201ENST00000320857 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
SSR4-201ENST00000320857 A8MU10 97 aa8.62□□□□□ -1.03
SSR4-201ENST00000320857 UQCR11O14957 56 aa8.6□□□□□ -1.03
SSR4-201ENST00000320857 RBM12B-AS1Q9P1G2 102 aa8.6□□□□□ -1.03
SSR4-201ENST00000320857 S4R3F8 94 aa8.6□□□□□ -1.03
SSR4-201ENST00000320857 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
SSR4-201ENST00000320857 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
SSR4-201ENST00000320857 SPATA8Q6RVD6 105 aa8.54□□□□□ -1.04
SSR4-201ENST00000320857 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
SSR4-201ENST00000320857 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
SSR4-201ENST00000320857 MUC17Q685J3 4493 aa8.45□□□□□ -1.06
SSR4-201ENST00000320857 A0A1B0GU33 70 aa8.45□□□□□ -1.06
SSR4-201ENST00000320857 PMAIP1Q13794 54 aa8.44□□□□□ -1.06
SSR4-201ENST00000320857 RNF213Q63HN8 5207 aa8.43□□□□□ -1.06
SSR4-201ENST00000320857 KRTAP4-1Q9BYQ7 146 aa8.4□□□□□ -1.06
SSR4-201ENST00000320857 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
SSR4-201ENST00000320857 A6NN06 94 aa8.34□□□□□ -1.07
SSR4-201ENST00000320857 H0YAA0 97 aa8.34□□□□□ -1.07
SSR4-201ENST00000320857 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.08
SSR4-201ENST00000320857 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
SSR4-201ENST00000320857 MUC2Q02817 5179 aa8.28□□□□□ -1.08
SSR4-201ENST00000320857 ADM2Q7Z4H4 148 aa8.25□□□□□ -1.09
SSR4-201ENST00000320857 P0C880 135 aa8.22□□□□□ -1.09
SSR4-201ENST00000320857 KRTAP19-2Q3LHN2 52 aa8.22□□□□□ -1.09
SSR4-201ENST00000320857 KTN1-AS1Q86SY8 53 aa8.18□□□□□ -1.1
SSR4-201ENST00000320857 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
SSR4-201ENST00000320857 K7ERS5 55 aa8.12□□□□□ -1.11
SSR4-201ENST00000320857 M0QZ58 72 aa8.08□□□□□ -1.12
SSR4-201ENST00000320857 FAT4Q6V0I7 4981 aa8.05□□□□□ -1.12
SSR4-201ENST00000320857 A0A0D9SG42 100 aa8.05□□□□□ -1.12
SSR4-201ENST00000320857 FLGP20930 4061 aaPredicted RBP7.99□□□□□ -1.13
SSR4-201ENST00000320857 LCE2CQ5TA81 110 aa7.96□□□□□ -1.13
SSR4-201ENST00000320857 R4GN34 69 aa7.94□□□□□ -1.14
SSR4-201ENST00000320857 PRAC1Q96KF2 57 aa7.87□□□□□ -1.15
SSR4-201ENST00000320857 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
SSR4-201ENST00000320857 KRTAP12-2P59991 146 aa7.86□□□□□ -1.15
SSR4-201ENST00000320857 SPINT4Q6UDR6 99 aa7.86□□□□□ -1.15
SSR4-201ENST00000320857 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
SSR4-201ENST00000320857 ROMO1P60602 79 aa7.81□□□□□ -1.16
SSR4-201ENST00000320857 LINC01554Q52M75 96 aa7.81□□□□□ -1.16
SSR4-201ENST00000320857 MT1HP80294 61 aa7.8□□□□□ -1.16
SSR4-201ENST00000320857 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
SSR4-201ENST00000320857 M0R2T5 61 aa7.76□□□□□ -1.17
SSR4-201ENST00000320857 CRIPTQ9P021 101 aa7.76□□□□□ -1.17
SSR4-201ENST00000320857 KRTAP25-1Q3LHN0 102 aa7.63□□□□□ -1.19
SSR4-201ENST00000320857 KRTAP9-8Q9BYQ0 159 aa7.52□□□□□ -1.21
SSR4-201ENST00000320857 MT2AP02795 61 aa7.51□□□□□ -1.21
SSR4-201ENST00000320857 CAMK2N1Q7Z7J9 78 aa7.49□□□□□ -1.21
SSR4-201ENST00000320857 SPRR2GQ9BYE4 73 aa7.49□□□□□ -1.21
SSR4-201ENST00000320857 MT1FP04733 61 aa7.47□□□□□ -1.21
SSR4-201ENST00000320857 KRTAP10-10P60014 251 aa7.47□□□□□ -1.21
SSR4-201ENST00000320857 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
SSR4-201ENST00000320857 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
SSR4-201ENST00000320857 PLAC4Q8WY50 150 aa7.36□□□□□ -1.23
SSR4-201ENST00000320857 KRTAP9-2Q9BYQ4 174 aa7.27□□□□□ -1.25
SSR4-201ENST00000320857 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
SSR4-201ENST00000320857 LCE2DQ5TA82 110 aaPredicted RBP7.25□□□□□ -1.25
SSR4-201ENST00000320857 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
SSR4-201ENST00000320857 TNP1P09430 55 aa7.17□□□□□ -1.26
SSR4-201ENST00000320857 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
SSR4-201ENST00000320857 MT1BP07438 61 aa7.12□□□□□ -1.27
SSR4-201ENST00000320857 FSIP2Q5CZC0 6907 aa7.09□□□□□ -1.27
SSR4-201ENST00000320857 LCE2BO14633 110 aa7.09□□□□□ -1.27
SSR4-201ENST00000320857 USH2AO75445 5202 aa7.08□□□□□ -1.28
SSR4-201ENST00000320857 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
SSR4-201ENST00000320857 MT1XP80297 61 aa6.96□□□□□ -1.3
SSR4-201ENST00000320857 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
SSR4-201ENST00000320857 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
SSR4-201ENST00000320857 CRCT1Q9UGL9 99 aa6.93□□□□□ -1.3
SSR4-201ENST00000320857 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
SSR4-201ENST00000320857 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
SSR4-201ENST00000320857 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
SSR4-201ENST00000320857 LCE3AQ5TA76 89 aa6.78□□□□□ -1.32
SSR4-201ENST00000320857 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
SSR4-201ENST00000320857 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.33
SSR4-201ENST00000320857 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
SSR4-201ENST00000320857 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
SSR4-201ENST00000320857 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
SSR4-201ENST00000320857 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
SSR4-201ENST00000320857 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
SSR4-201ENST00000320857 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
SSR4-201ENST00000320857 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
SSR4-201ENST00000320857 MACF1Q9UPN3 7388 aaKnown RBP6.41□□□□□ -1.38
SSR4-201ENST00000320857 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
SSR4-201ENST00000320857 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
SSR4-201ENST00000320857 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
SSR4-201ENST00000320857 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
SSR4-201ENST00000320857 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
SSR4-201ENST00000320857 KMT2DO14686 5537 aa6.25□□□□□ -1.41
SSR4-201ENST00000320857 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
SSR4-201ENST00000320857 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
SSR4-201ENST00000320857 H3BS24 57 aa6.12□□□□□ -1.43
SSR4-201ENST00000320857 KRTAP6-3Q3LI67 103 aa6.11□□□□□ -1.43
SSR4-201ENST00000320857 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms